RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 RCOR3Q9P2K3 495 aaPredicted RBP5.37□□□□□ -1.55
CPSF7-220ENST00000541963 SARDHQ9UL12 918 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 RIMKLBQ9ULI2 386 aa5.37□□□□□ -1.55
CPSF7-220ENST00000541963 MUC22E2RYF6 1773 aaPredicted RBP5.37□□□□□ -1.55
CPSF7-220ENST00000541963 TNRC6BQ9UPQ9 1833 aaKnown RBP5.37□□□□□ -1.55
CPSF7-220ENST00000541963 FAM186AA6NE01 2351 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 DMDP11532 3685 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 A0A1B0GVT2 93 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 A0A1W2PQ67 120 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 AGPSO00116 658 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 TLR4O00206 839 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 DFFAO00273 331 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 QSOX1O00391 747 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 PCDH17O14917 1159 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 PRAMEF11O60813 436 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 ZNF821O75541 412 aaPredicted RBP5.36□□□□□ -1.55
CPSF7-220ENST00000541963 TMCC1O94876 653 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 PROSCO94903 275 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 IPO7O95373 1038 aaKnown RBP5.36□□□□□ -1.55
CPSF7-220ENST00000541963 IGHV4-34P06331 123 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 CTSLP07711 333 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 IL6RP08887 468 aaPredicted RBP5.36□□□□□ -1.55
CPSF7-220ENST00000541963 ADRB3P13945 408 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 CREB1P16220 341 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 ZNF37AP17032 561 aaPredicted RBP5.36□□□□□ -1.55
CPSF7-220ENST00000541963 AKT2P31751 481 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 CYLC1P35663 651 aaPredicted RBP5.36□□□□□ -1.55
CPSF7-220ENST00000541963 HSPA9P38646 679 aaKnown RBP5.36□□□□□ -1.55
CPSF7-220ENST00000541963 SLC1A1P43005 524 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 MAGEA1P43355 309 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 CSNK1DP48730 415 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 ARRB1P49407 418 aaPredicted RBP5.36□□□□□ -1.55
CPSF7-220ENST00000541963 PAPOLAP51003 745 aaKnown RBP5.36□□□□□ -1.55
CPSF7-220ENST00000541963 NOVA1P51513 510 aaKnown RBP5.36□□□□□ -1.55
CPSF7-220ENST00000541963 CLCN2P51788 898 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 CDH6P55285 790 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 POLR2LP62875 67 aaKnown RBP5.36□□□□□ -1.55
CPSF7-220ENST00000541963 MRPS35P82673 323 aaKnown RBP5.36□□□□□ -1.55
CPSF7-220ENST00000541963 IL10RBQ08334 325 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 GRIK2Q13002 908 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 MPP3Q13368 585 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 ACOX1Q15067 660 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 CA9Q16790 459 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 ASTE1Q2TB18 679 aaPredicted RBP5.36□□□□□ -1.55
CPSF7-220ENST00000541963 HLA-BQ31612 363 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 POM121L1PQ3SYA9 428 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 KCNT1Q5JUK3 1230 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 NAPEPLDQ6IQ20 393 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 KIAA1161Q6NSJ0 714 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 ZNF771Q7L3S4 317 aaPredicted RBP5.36□□□□□ -1.55
CPSF7-220ENST00000541963 ZNF551Q7Z340 670 aaPredicted RBP5.36□□□□□ -1.55
CPSF7-220ENST00000541963 WDR53Q7Z5U6 358 aaPredicted RBP5.36□□□□□ -1.55
CPSF7-220ENST00000541963 IQCHQ86VS3 1027 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 HORMAD1Q86X24 394 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 CCDC170Q8IYT3 715 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 KRT222Q8N1A0 295 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 ARFGAP1Q8N6T3 406 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 RP9Q8TA86 221 aaKnown RBP5.36□□□□□ -1.55
CPSF7-220ENST00000541963 STT3BQ8TCJ2 826 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 SETD7Q8WTS6 366 aaKnown RBP5.36□□□□□ -1.55
CPSF7-220ENST00000541963 CPT1BQ92523 772 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 ARRDC3Q96B67 414 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 CELF6Q96J87 481 aaKnown RBP5.36□□□□□ -1.55
CPSF7-220ENST00000541963 ZNF641Q96N77 438 aaPredicted RBP5.36□□□□□ -1.55
CPSF7-220ENST00000541963 ZNF599Q96NL3 588 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 TRAPPC9Q96Q05 1148 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 PEBP4Q96S96 227 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 CHP1Q99653 195 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 CINPQ9BW66 212 aaPredicted RBP5.36□□□□□ -1.55
CPSF7-220ENST00000541963 C1QTNF7Q9BXJ2 289 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 TM6SF2Q9BZW4 377 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 SLC39A8Q9C0K1 460 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 LRRC19Q9H756 370 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 ERVMER34-1Q9H9K5 563 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 GDF3Q9NR23 364 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 SNX15Q9NRS6 342 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.36□□□□□ -1.55
CPSF7-220ENST00000541963 CWC15Q9P013 229 aaKnown RBP5.36□□□□□ -1.55
CPSF7-220ENST00000541963 DKK3Q9UBP4 350 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 SERGEFQ9UGK8 458 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 GPR52Q9Y2T5 361 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 MFHAS1Q9Y4C4 1052 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 HS3ST3A1Q9Y663 406 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 SDK1Q7Z5N4 2213 aa5.36□□□□□ -1.55
CPSF7-220ENST00000541963 ZFHX2Q9C0A1 2572 aaPredicted RBP5.36□□□□□ -1.55
CPSF7-220ENST00000541963 VPS13AQ96RL7 3174 aa5.35□□□□□ -1.55
CPSF7-220ENST00000541963 C16orf96A6NNT2 1141 aa5.35□□□□□ -1.55
CPSF7-220ENST00000541963 TMEM110-MUSTN1A8MSY1 372 aa5.35□□□□□ -1.55
CPSF7-220ENST00000541963 A8MVJ9 347 aa5.35□□□□□ -1.55
CPSF7-220ENST00000541963 J3KR12 359 aa5.35□□□□□ -1.55
CPSF7-220ENST00000541963 PLK4O00444 970 aa5.35□□□□□ -1.55
CPSF7-220ENST00000541963 CES2O00748 559 aa5.35□□□□□ -1.55
CPSF7-220ENST00000541963 SLC31A1O15431 190 aa5.35□□□□□ -1.55
CPSF7-220ENST00000541963 FLRT2O43155 660 aa5.35□□□□□ -1.55
CPSF7-220ENST00000541963 LATO43561 262 aa5.35□□□□□ -1.55
CPSF7-220ENST00000541963 SH3BP5O60239 455 aa5.35□□□□□ -1.55
CPSF7-220ENST00000541963 PMPCBO75439 489 aa5.35□□□□□ -1.55
CPSF7-220ENST00000541963 NEBLO76041 1014 aa5.35□□□□□ -1.55
CPSF7-220ENST00000541963 URI1O94763 535 aaPredicted RBP5.35□□□□□ -1.55
CPSF7-220ENST00000541963 TRIM16O95361 564 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 248.8 ms