RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 IRGCQ6NXR0 463 aa12.54□□□□□ -0.4
CCDC42-202ENST00000539522 C16orf46Q6P387 395 aa12.54□□□□□ -0.4
CCDC42-202ENST00000539522 AGTRAPQ6RW13 159 aa12.54□□□□□ -0.4
CCDC42-202ENST00000539522 DGLUCYQ7Z3D6 616 aa12.54□□□□□ -0.4
CCDC42-202ENST00000539522 OOSP2Q86WS3 158 aa12.54□□□□□ -0.4
CCDC42-202ENST00000539522 TMPRSS12Q86WS5 348 aa12.54□□□□□ -0.4
CCDC42-202ENST00000539522 BMPERQ8N8U9 685 aa12.54□□□□□ -0.4
CCDC42-202ENST00000539522 ANKRD42Q8N9B4 389 aa12.54□□□□□ -0.4
CCDC42-202ENST00000539522 OR56A3Q8NH54 315 aa12.54□□□□□ -0.4
CCDC42-202ENST00000539522 TCP10LQ8TDR4 215 aa12.54□□□□□ -0.4
CCDC42-202ENST00000539522 KLHL6Q8WZ60 621 aa12.54□□□□□ -0.4
CCDC42-202ENST00000539522 RHBDF1Q96CC6 855 aa12.54□□□□□ -0.4
CCDC42-202ENST00000539522 FBXL8Q96CD0 374 aa12.54□□□□□ -0.4
CCDC42-202ENST00000539522 SGPP1Q9BX95 441 aa12.54□□□□□ -0.4
CCDC42-202ENST00000539522 ATG10Q9H0Y0 220 aa12.54□□□□□ -0.4
CCDC42-202ENST00000539522 EPB41L1Q9H4G0 881 aa12.54□□□□□ -0.4
CCDC42-202ENST00000539522 SLC6A20Q9NP91 592 aa12.54□□□□□ -0.4
CCDC42-202ENST00000539522 INTS7Q9NVH2 962 aaKnown RBP12.54□□□□□ -0.4
CCDC42-202ENST00000539522 SIDT1Q9NXL6 827 aaKnown RBP12.54□□□□□ -0.4
CCDC42-202ENST00000539522 KLHL3Q9UH77 587 aa12.54□□□□□ -0.4
CCDC42-202ENST00000539522 CLCA2Q9UQC9 943 aa12.54□□□□□ -0.4
CCDC42-202ENST00000539522 CELSR3Q9NYQ7 3312 aa12.54□□□□□ -0.4
CCDC42-202ENST00000539522 HEATR5BQ9P2D3 2071 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 PIPSLA2A3N6 862 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 LRRC14BA6NHZ5 514 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 A8MU76 341 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 UBXN8O00124 270 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 TK2O00142 265 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 KLK8O60259 260 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 PRAMEF4O60810 478 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 KERAO60938 352 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 GLRA3O75311 464 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 GUCA1CO95843 209 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 ADRB1P08588 477 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 ENO2P09104 434 aaPredicted RBP12.53□□□□□ -0.4
CCDC42-202ENST00000539522 ANKRD34CP0C6C1 535 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 CDK4P11802 303 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 HGFP14210 728 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 EPORP19235 508 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 CYP2A7P20853 494 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 ETV5P41161 510 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 GABRA4P48169 554 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 TBPL1P62380 186 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 CDKL1Q00532 357 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 GUCY1A3Q02108 690 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 FOXC1Q12948 553 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 ARHGAP19Q14CB8 494 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 ACAP2Q15057 778 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 TAF1BQ53T94 588 aaPredicted RBP12.53□□□□□ -0.4
CCDC42-202ENST00000539522 PRAMEF9Q5VWM5 478 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 KIAA1614Q5VZ46 1190 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 FAM219BQ5XKK7 198 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 FCRL6Q6DN72 434 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 SPESP1Q6UW49 350 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 PRSS42Q7Z5A4 293 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 ADAMTSL2Q86TH1 951 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 TBC1D1Q86TI0 1168 aaPredicted RBP12.53□□□□□ -0.4
CCDC42-202ENST00000539522 KLHDC8AQ8IYD2 350 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 PDPRQ8NCN5 879 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 WDR48Q8TAF3 677 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 RHEBL1Q8TAI7 183 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 ESAMQ96AP7 390 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 PYCR2Q96C36 320 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 AHCYL2Q96HN2 611 aaKnown RBP12.53□□□□□ -0.4
CCDC42-202ENST00000539522 CCDC138Q96M89 665 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 TSNARE1Q96NA8 513 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 TRAPPC9Q96Q05 1148 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 KLHL25Q9H0H3 589 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 ZNF768Q9H5H4 540 aaKnown RBP12.53□□□□□ -0.4
CCDC42-202ENST00000539522 NMRAL1Q9HBL8 299 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 FAM60AQ9NP50 221 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 OCIAD1Q9NX40 245 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 PSD3Q9NYI0 1048 aa12.53□□□□□ -0.4
CCDC42-202ENST00000539522 PTBP2Q9UKA9 531 aaKnown RBP12.53□□□□□ -0.4
CCDC42-202ENST00000539522 GSAPA4D1B5 854 aa12.52□□□□□ -0.41
CCDC42-202ENST00000539522 NCF1BA6NI72 391 aaPredicted RBP12.52□□□□□ -0.41
CCDC42-202ENST00000539522 NCF1CA8MVU1 366 aaPredicted RBP12.52□□□□□ -0.41
CCDC42-202ENST00000539522 C2orf74A8MZ97 194 aa12.52□□□□□ -0.41
CCDC42-202ENST00000539522 CCL4P13236 92 aa12.52□□□□□ -0.41
CCDC42-202ENST00000539522 NCF1P14598 390 aaPredicted RBP12.52□□□□□ -0.41
CCDC42-202ENST00000539522 GGT5P36269 586 aa12.52□□□□□ -0.41
CCDC42-202ENST00000539522 GDF5P43026 501 aa12.52□□□□□ -0.41
CCDC42-202ENST00000539522 AGTR2P50052 363 aa12.52□□□□□ -0.41
CCDC42-202ENST00000539522 INHBCP55103 352 aa12.52□□□□□ -0.41
CCDC42-202ENST00000539522 AP1S2P56377 157 aa12.52□□□□□ -0.41
CCDC42-202ENST00000539522 WDR4P57081 412 aaKnown RBP12.52□□□□□ -0.41
CCDC42-202ENST00000539522 SH3BP2P78314 561 aa12.52□□□□□ -0.41
CCDC42-202ENST00000539522 KCNAB1Q14722 419 aa12.52□□□□□ -0.41
CCDC42-202ENST00000539522 KIR2DS3Q14952 304 aa12.52□□□□□ -0.41
CCDC42-202ENST00000539522 SNAP47Q5SQN1 464 aa12.52□□□□□ -0.41
CCDC42-202ENST00000539522 PLXDC1Q8IUK5 500 aa12.52□□□□□ -0.41
CCDC42-202ENST00000539522 OR2L3Q8NG85 312 aa12.52□□□□□ -0.41
CCDC42-202ENST00000539522 MAGEC3Q8TD91 643 aa12.52□□□□□ -0.41
CCDC42-202ENST00000539522 MCOLN3Q8TDD5 553 aa12.52□□□□□ -0.41
CCDC42-202ENST00000539522 DYDC1Q8WWB3 177 aa12.52□□□□□ -0.41
CCDC42-202ENST00000539522 SLC41A2Q96JW4 573 aa12.52□□□□□ -0.41
CCDC42-202ENST00000539522 SCNM1Q9BWG6 230 aa12.52□□□□□ -0.41
CCDC42-202ENST00000539522 TMEM121BQ9BXQ6 578 aaPredicted RBP12.52□□□□□ -0.41
CCDC42-202ENST00000539522 ARL15Q9NXU5 204 aa12.52□□□□□ -0.41
CCDC42-202ENST00000539522 XPR1Q9UBH6 696 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms