RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 CCT8L1PA6NM43 557 aa11.33□□□□□ -0.6
SPARC-207ENST00000537849 TRPC5OSA6NMA1 111 aa11.33□□□□□ -0.6
SPARC-207ENST00000537849 ZNF839A8K0R7 811 aa11.33□□□□□ -0.6
SPARC-207ENST00000537849 LMO7DNF2Z398 122 aa11.33□□□□□ -0.6
SPARC-207ENST00000537849 AQP9O43315 295 aa11.33□□□□□ -0.6
SPARC-207ENST00000537849 DIAPH2O60879 1101 aa11.33□□□□□ -0.6
SPARC-207ENST00000537849 PIAS2O75928 621 aa11.33□□□□□ -0.6
SPARC-207ENST00000537849 CD22P20273 847 aa11.33□□□□□ -0.6
SPARC-207ENST00000537849 CCND1P24385 295 aa11.33□□□□□ -0.6
SPARC-207ENST00000537849 EPHA3P29320 983 aa11.33□□□□□ -0.6
SPARC-207ENST00000537849 RAB28P51157 221 aa11.33□□□□□ -0.6
SPARC-207ENST00000537849 TBPL1P62380 186 aa11.33□□□□□ -0.6
SPARC-207ENST00000537849 YBX1P67809 324 aaKnown RBP11.33□□□□□ -0.6
SPARC-207ENST00000537849 BNIP3Q12983 259 aa11.33□□□□□ -0.6
SPARC-207ENST00000537849 DOC2AQ14183 400 aa11.33□□□□□ -0.6
SPARC-207ENST00000537849 SIM2Q14190 667 aaPredicted RBP11.33□□□□□ -0.6
SPARC-207ENST00000537849 TBCCQ15814 346 aa11.33□□□□□ -0.6
SPARC-207ENST00000537849 LSM12Q3MHD2 195 aaKnown RBP11.33□□□□□ -0.6
SPARC-207ENST00000537849 GGTA1PQ4G0N0 100 aa11.33□□□□□ -0.6
SPARC-207ENST00000537849 TCHHL1Q5QJ38 904 aaPredicted RBP11.33□□□□□ -0.6
SPARC-207ENST00000537849 LIPJQ5W064 366 aa11.33□□□□□ -0.6
SPARC-207ENST00000537849 LARP4Q71RC2 724 aaKnown RBP eCLIP11.33□□□□□ -0.6
SPARC-207ENST00000537849 GKN2Q86XP6 184 aa11.33□□□□□ -0.6
SPARC-207ENST00000537849 SLC25A45Q8N413 288 aa11.33□□□□□ -0.6
SPARC-207ENST00000537849 CHCHD4Q8N4Q1 142 aa11.33□□□□□ -0.6
SPARC-207ENST00000537849 AFAP1L2Q8N4X5 818 aa11.33□□□□□ -0.6
SPARC-207ENST00000537849 ACTRT2Q8TDY3 377 aa11.33□□□□□ -0.6
SPARC-207ENST00000537849 SLC37A2Q8TED4 501 aa11.33□□□□□ -0.6
SPARC-207ENST00000537849 ZDHHC1Q8WTX9 485 aa11.33□□□□□ -0.6
SPARC-207ENST00000537849 TWIST2Q8WVJ9 160 aa11.33□□□□□ -0.6
SPARC-207ENST00000537849 NEIL2Q969S2 332 aa11.33□□□□□ -0.6
SPARC-207ENST00000537849 CXorf40BQ96DE9 158 aa11.33□□□□□ -0.6
SPARC-207ENST00000537849 PRR11Q96HE9 360 aaPredicted RBP11.33□□□□□ -0.6
SPARC-207ENST00000537849 MYLK2Q9H1R3 596 aa11.33□□□□□ -0.6
SPARC-207ENST00000537849 CCDC177Q9NQR7 707 aaPredicted RBP11.33□□□□□ -0.6
SPARC-207ENST00000537849 UCKL1Q9NWZ5 548 aa11.33□□□□□ -0.6
SPARC-207ENST00000537849 SUSD2Q9UGT4 822 aa11.33□□□□□ -0.6
SPARC-207ENST00000537849 KCNE2Q9Y6J6 123 aa11.33□□□□□ -0.6
SPARC-207ENST00000537849 CSNK1G3Q9Y6M4 447 aa11.33□□□□□ -0.6
SPARC-207ENST00000537849 ZNF318Q5VUA4 2279 aa11.33□□□□□ -0.6
SPARC-207ENST00000537849 GOLGA8QA0A0J9YX86 632 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 GOLGA8OA6NCC3 632 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 FAM86C2PA6NEL3 165 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 E7EQ34 232 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 GOLGA8NF8WBI6 632 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 MANBAO00462 879 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 GIPC1O14908 333 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 CLGNO14967 610 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 PIP5K1BO14986 540 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 NOBOXO60393 691 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 UGDHO60701 494 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 SKAP2O75563 359 aaPredicted RBP11.32□□□□□ -0.6
SPARC-207ENST00000537849 VIPP01282 170 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 LINC00032P0C843 101 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 GIMD1P0DJR0 217 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 C1GALT1C1LP0DN25 315 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 JUPP14923 745 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 GNAZP19086 355 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 PEBP1P30086 187 aaKnown RBP11.32□□□□□ -0.6
SPARC-207ENST00000537849 HTR6P50406 440 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 IRF8Q02556 426 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 IFT88Q13099 833 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 ZNF423Q2M1K9 1284 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 XKR6Q5GH73 641 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 CATSPEREQ5SY80 951 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.32□□□□□ -0.6
SPARC-207ENST00000537849 PRAMEF13Q5VWM6 474 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 ATG9BQ674R7 924 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 SCIMPQ6UWF3 145 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 NXPE4Q6UWF7 544 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 RNF165Q6ZSG1 346 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 Q6ZSR9 355 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 EFL1Q7Z2Z2 1120 aaKnown RBP11.32□□□□□ -0.6
SPARC-207ENST00000537849 KANSL1Q7Z3B3 1105 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 MTDHQ86UE4 582 aaKnown RBP11.32□□□□□ -0.6
SPARC-207ENST00000537849 ALYREFQ86V81 257 aaKnown RBP11.32□□□□□ -0.6
SPARC-207ENST00000537849 ADGRF3Q8IZF5 1079 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 FITM2Q8N6M3 262 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 ZNF548Q8NEK5 533 aaPredicted RBP11.32□□□□□ -0.6
SPARC-207ENST00000537849 OR4E2Q8NGC2 313 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 OR2A1Q8NGT9 310 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 LCN9Q8WX39 176 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 JPH3Q8WXH2 748 aaPredicted RBP11.32□□□□□ -0.6
SPARC-207ENST00000537849 USP7Q93009 1102 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 PPP1R36Q96LQ0 422 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 RILPQ96NA2 401 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 HAUS8Q9BT25 410 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 RAB11FIP5Q9BXF6 653 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 SLC29A3Q9BZD2 475 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 PCBD2Q9H0N5 130 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 EHD1Q9H4M9 534 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 ACTR8Q9H981 624 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 ABCF3Q9NUQ8 709 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 SPHK1Q9NYA1 384 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 ZNF490Q9ULM2 529 aaPredicted RBP11.32□□□□□ -0.6
SPARC-207ENST00000537849 BTRCQ9Y297 605 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 CCL27Q9Y4X3 112 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 PCDHGA2Q9Y5H1 932 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 PTGDR2Q9Y5Y4 395 aa11.32□□□□□ -0.6
SPARC-207ENST00000537849 MDC1Q14676 2089 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms