RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 COX4I2Q96KJ9 171 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 HIST1H2AHQ96KK5 128 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 HIST1H2AJQ99878 128 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 H2AFJQ9BTM1 129 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 INTS6Q9UL03 887 aaKnown RBP13.93□□□□□ -0.18
USP44-203ENST00000537435 ABCG2Q9UNQ0 655 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 SAMD4AQ9UPU9 718 aaKnown RBP13.93□□□□□ -0.18
USP44-203ENST00000537435 SCN8AQ9UQD0 1980 aa13.93□□□□□ -0.18
USP44-203ENST00000537435 PRAMEF4O60810 478 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 CCNDBP1O95273 360 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 OLFM2O95897 454 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 INHAP05111 366 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 CCDC159P0C7I6 412 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 OR56A5P0C7T3 313 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 ITGAMP11215 1152 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 HOXB6P17509 224 aaKnown RBP13.92□□□□□ -0.18
USP44-203ENST00000537435 AMD1P17707 334 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 LHCGRP22888 699 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 PRPH2P23942 346 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 CTSOP43234 321 aaPredicted RBP13.92□□□□□ -0.18
USP44-203ENST00000537435 STK19P49842 368 aaPredicted RBP13.92□□□□□ -0.18
USP44-203ENST00000537435 PSMD7P51665 324 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 EPHB3P54753 998 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 PTPN5P54829 565 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 GP2P55259 537 aaKnown RBP13.92□□□□□ -0.18
USP44-203ENST00000537435 CCL23P55773 120 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 ZC3H12BQ5HYM0 836 aaKnown RBP13.92□□□□□ -0.18
USP44-203ENST00000537435 PRAMEF9Q5VWM5 478 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 BBS7Q8IWZ6 715 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 TCAIMQ8N3R3 496 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 CD99L2Q8TCZ2 262 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 TRUB1Q8WWH5 349 aaKnown RBP13.92□□□□□ -0.18
USP44-203ENST00000537435 POP5Q969H6 163 aaKnown RBP13.92□□□□□ -0.18
USP44-203ENST00000537435 VOPP1Q96AW1 172 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 SCRN2Q96FV2 425 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 EBPLQ9BY08 206 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 IL21Q9HBE4 155 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 THG1LQ9NWX6 298 aaKnown RBP13.92□□□□□ -0.18
USP44-203ENST00000537435 KIAA1522Q9P206 1035 aaPredicted RBP13.92□□□□□ -0.18
USP44-203ENST00000537435 ENPP5Q9UJA9 477 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 LSM7Q9UK45 103 aaKnown RBP13.92□□□□□ -0.18
USP44-203ENST00000537435 SLC22A14Q9Y267 594 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 DGKBQ9Y6T7 804 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 CBFA2T3O75081 653 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 ANGPTL1O95841 491 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 C8GP07360 202 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 ITPKAP23677 461 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 AOAHP28039 575 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 SLC6A12P48065 614 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 CYP4F8P98187 520 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 IL1RL1Q01638 556 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 BOP1Q14137 746 aaKnown RBP13.92□□□□□ -0.18
USP44-203ENST00000537435 NR1D2Q14995 579 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 SPOUT1Q5T280 376 aaKnown RBP13.92□□□□□ -0.18
USP44-203ENST00000537435 DCDC5Q6ZRR9 648 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 USP45Q70EL2 814 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 CEP68Q76N32 757 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 RNF175Q8N4F7 328 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 L3MBTL4Q8NA19 623 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 PIK3C3Q8NEB9 887 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 NELL1Q92832 810 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 TRIT1Q9H3H1 467 aaKnown RBP13.92□□□□□ -0.18
USP44-203ENST00000537435 RIBC2Q9H4K1 309 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 HMX1Q9NP08 348 aaPredicted RBP13.92□□□□□ -0.18
USP44-203ENST00000537435 PALMDQ9NP74 551 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 AASDHPPTQ9NRN7 309 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 TMED5Q9Y3A6 229 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 INSL5Q9Y5Q6 135 aa13.92□□□□□ -0.18
USP44-203ENST00000537435 PABPN1LA6NDY0 278 aaKnown RBP13.91□□□□□ -0.18
USP44-203ENST00000537435 EVPLLA8MZ36 301 aa13.91□□□□□ -0.18
USP44-203ENST00000537435 PITPNM1O00562 1244 aa13.91□□□□□ -0.18
USP44-203ENST00000537435 MAN1A2O60476 641 aa13.91□□□□□ -0.18
USP44-203ENST00000537435 NDUFS2O75306 463 aa13.91□□□□□ -0.18
USP44-203ENST00000537435 SRCP12931 536 aa13.91□□□□□ -0.18
USP44-203ENST00000537435 KIR3DL1P43629 444 aa13.91□□□□□ -0.18
USP44-203ENST00000537435 SIM2Q14190 667 aaPredicted RBP13.91□□□□□ -0.18
USP44-203ENST00000537435 LDLRAP1Q5SW96 308 aa13.91□□□□□ -0.18
USP44-203ENST00000537435 ZCCHC8Q6NZY4 707 aaKnown RBP13.91□□□□□ -0.18
USP44-203ENST00000537435 FBLIM1Q8WUP2 373 aa13.91□□□□□ -0.18
USP44-203ENST00000537435 ASB11Q8WXH4 323 aa13.91□□□□□ -0.18
USP44-203ENST00000537435 AUTS2Q8WXX7 1259 aa13.91□□□□□ -0.18
USP44-203ENST00000537435 ZNF566Q969W8 418 aa13.91□□□□□ -0.18
USP44-203ENST00000537435 ZNF106Q9H2Y7 1883 aaKnown RBP13.91□□□□□ -0.18
USP44-203ENST00000537435 ZNF99A8MXY4 864 aaPredicted RBP13.91□□□□□ -0.18
USP44-203ENST00000537435 MYO1GB0I1T2 1018 aa13.91□□□□□ -0.18
USP44-203ENST00000537435 CFAP99D6REC4 459 aa13.91□□□□□ -0.18
USP44-203ENST00000537435 EIF3FO00303 357 aaPredicted RBP13.91□□□□□ -0.18
USP44-203ENST00000537435 AXIN1O15169 862 aa13.91□□□□□ -0.18
USP44-203ENST00000537435 NUAK1O60285 661 aa13.91□□□□□ -0.18
USP44-203ENST00000537435 DNAJB5O75953 348 aa13.91□□□□□ -0.18
USP44-203ENST00000537435 OCM2P0CE71 109 aa13.91□□□□□ -0.18
USP44-203ENST00000537435 OCMP0CE72 109 aaPredicted RBP13.91□□□□□ -0.18
USP44-203ENST00000537435 CYP4B1P13584 511 aa13.91□□□□□ -0.18
USP44-203ENST00000537435 HOXD10P28358 340 aa13.91□□□□□ -0.18
USP44-203ENST00000537435 FMO3P31513 532 aa13.91□□□□□ -0.18
USP44-203ENST00000537435 HALP42357 657 aa13.91□□□□□ -0.18
USP44-203ENST00000537435 HNMTP50135 292 aa13.91□□□□□ -0.18
USP44-203ENST00000537435 DAPP51397 102 aa13.91□□□□□ -0.18
USP44-203ENST00000537435 RAB15P59190 212 aa13.91□□□□□ -0.18
USP44-203ENST00000537435 SNRPD1P62314 119 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms