RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 CCR10P46092 362 aa17.21■□□□□ 0.34
TNFRSF1A-209ENST00000536717 PMS2P54278 862 aa17.21■□□□□ 0.34
TNFRSF1A-209ENST00000536717 ITGA1P56199 1179 aa17.21■□□□□ 0.34
TNFRSF1A-209ENST00000536717 RPS18P62269 152 aaKnown RBP17.21■□□□□ 0.34
TNFRSF1A-209ENST00000536717 DEFB109BQ30KR1 87 aa17.21■□□□□ 0.34
TNFRSF1A-209ENST00000536717 CNSTQ6PJW8 725 aa17.21■□□□□ 0.34
TNFRSF1A-209ENST00000536717 KIAA0408Q6ZU52 694 aa17.21■□□□□ 0.34
TNFRSF1A-209ENST00000536717 TRMT10CQ7L0Y3 403 aaKnown RBP17.21■□□□□ 0.34
TNFRSF1A-209ENST00000536717 CNTN4Q8IWV2 1026 aa17.21■□□□□ 0.34
TNFRSF1A-209ENST00000536717 ZBTB2Q8N680 514 aa17.21■□□□□ 0.34
TNFRSF1A-209ENST00000536717 SLC30A3Q99726 388 aa17.21■□□□□ 0.34
TNFRSF1A-209ENST00000536717 CHST8Q9H2A9 424 aa17.21■□□□□ 0.34
TNFRSF1A-209ENST00000536717 ADNPQ9H2P0 1102 aa17.21■□□□□ 0.34
TNFRSF1A-209ENST00000536717 ACTL8Q9H568 366 aa17.21■□□□□ 0.34
TNFRSF1A-209ENST00000536717 ACTR5Q9H9F9 607 aaPredicted RBP17.21■□□□□ 0.34
TNFRSF1A-209ENST00000536717 TSR3Q9UJK0 312 aaKnown RBP17.21■□□□□ 0.34
TNFRSF1A-209ENST00000536717 E7EQ34 232 aa17.2■□□□□ 0.34
TNFRSF1A-209ENST00000536717 ZNF749O43361 778 aa17.2■□□□□ 0.34
TNFRSF1A-209ENST00000536717 PRICKLE3O43900 615 aaPredicted RBP17.2■□□□□ 0.34
TNFRSF1A-209ENST00000536717 ACSL3O95573 720 aa17.2■□□□□ 0.34
TNFRSF1A-209ENST00000536717 RECKO95980 971 aa17.2■□□□□ 0.34
TNFRSF1A-209ENST00000536717 KLK3P07288 261 aaPredicted RBP17.2■□□□□ 0.34
TNFRSF1A-209ENST00000536717 CTSBP07858 339 aa17.2■□□□□ 0.34
TNFRSF1A-209ENST00000536717 MAGP20916 626 aa17.2■□□□□ 0.34
TNFRSF1A-209ENST00000536717 ATP5DP30049 168 aa17.2■□□□□ 0.34
TNFRSF1A-209ENST00000536717 CLCN7P51798 805 aa17.2■□□□□ 0.34
TNFRSF1A-209ENST00000536717 NFATC3Q12968 1075 aa17.2■□□□□ 0.34
TNFRSF1A-209ENST00000536717 NAA30Q147X3 362 aaPredicted RBP17.2■□□□□ 0.34
TNFRSF1A-209ENST00000536717 ACSBG2Q5FVE4 666 aa17.2■□□□□ 0.34
TNFRSF1A-209ENST00000536717 TEDDM1Q5T9Z0 273 aa17.2■□□□□ 0.34
TNFRSF1A-209ENST00000536717 ZNF549Q6P9A3 640 aa17.2■□□□□ 0.34
TNFRSF1A-209ENST00000536717 ZNF605Q86T29 641 aa17.2■□□□□ 0.34
TNFRSF1A-209ENST00000536717 SPNS2Q8IVW8 549 aa17.2■□□□□ 0.34
TNFRSF1A-209ENST00000536717 C2CD4AQ8NCU7 369 aaPredicted RBP17.2■□□□□ 0.34
TNFRSF1A-209ENST00000536717 DENND1AQ8TEH3 1009 aa17.2■□□□□ 0.34
TNFRSF1A-209ENST00000536717 CLIP3Q96DZ5 547 aa17.2■□□□□ 0.34
TNFRSF1A-209ENST00000536717 GPR87Q9BY21 358 aa17.2■□□□□ 0.34
TNFRSF1A-209ENST00000536717 NSMCE4AQ9NXX6 385 aa17.2■□□□□ 0.34
TNFRSF1A-209ENST00000536717 SLC39A10Q9ULF5 831 aa17.2■□□□□ 0.34
TNFRSF1A-209ENST00000536717 KLHL20Q9Y2M5 609 aa17.2■□□□□ 0.34
TNFRSF1A-209ENST00000536717 TNRC6AQ8NDV7 1962 aaKnown RBP17.19■□□□□ 0.34
TNFRSF1A-209ENST00000536717 E5RI56 91 aa17.19■□□□□ 0.34
TNFRSF1A-209ENST00000536717 CAPN1P07384 714 aa17.19■□□□□ 0.34
TNFRSF1A-209ENST00000536717 SFTPCP11686 197 aa17.19■□□□□ 0.34
TNFRSF1A-209ENST00000536717 PTPN4P29074 926 aa17.19■□□□□ 0.34
TNFRSF1A-209ENST00000536717 MPP1Q00013 466 aa17.19■□□□□ 0.34
TNFRSF1A-209ENST00000536717 ZNF385CQ66K41 422 aaPredicted RBP17.19■□□□□ 0.34
TNFRSF1A-209ENST00000536717 TTC23LQ6PF05 361 aa17.19■□□□□ 0.34
TNFRSF1A-209ENST00000536717 SYTL1Q8IYJ3 562 aa17.19■□□□□ 0.34
TNFRSF1A-209ENST00000536717 DNAJC22Q8N4W6 341 aa17.19■□□□□ 0.34
TNFRSF1A-209ENST00000536717 GIMAP7Q8NHV1 300 aa17.19■□□□□ 0.34
TNFRSF1A-209ENST00000536717 FBF1Q8TES7 1133 aa17.19■□□□□ 0.34
TNFRSF1A-209ENST00000536717 SLC22A18Q96BI1 424 aa17.19■□□□□ 0.34
TNFRSF1A-209ENST00000536717 FOPNLQ96NB1 174 aa17.19■□□□□ 0.34
TNFRSF1A-209ENST00000536717 RAB11FIP5Q9BXF6 653 aa17.19■□□□□ 0.34
TNFRSF1A-209ENST00000536717 SLC25A18Q9H1K4 315 aa17.19■□□□□ 0.34
TNFRSF1A-209ENST00000536717 RAB21Q9UL25 225 aa17.19■□□□□ 0.34
TNFRSF1A-209ENST00000536717 KCNMB2Q9Y691 235 aa17.19■□□□□ 0.34
TNFRSF1A-209ENST00000536717 OR2B3O76000 313 aa17.18■□□□□ 0.34
TNFRSF1A-209ENST00000536717 PLA2G2AP14555 144 aa17.18■□□□□ 0.34
TNFRSF1A-209ENST00000536717 CCNFP41002 786 aa17.18■□□□□ 0.34
TNFRSF1A-209ENST00000536717 KCNAB2Q13303 367 aa17.18■□□□□ 0.34
TNFRSF1A-209ENST00000536717 KLHL38Q2WGJ6 581 aa17.18■□□□□ 0.34
TNFRSF1A-209ENST00000536717 PTCHD3Q3KNS1 767 aa17.18■□□□□ 0.34
TNFRSF1A-209ENST00000536717 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.18■□□□□ 0.34
TNFRSF1A-209ENST00000536717 EMBQ6PCB8 327 aa17.18■□□□□ 0.34
TNFRSF1A-209ENST00000536717 FAM198BQ6UWH4 519 aa17.18■□□□□ 0.34
TNFRSF1A-209ENST00000536717 GALNT7Q86SF2 657 aa17.18■□□□□ 0.34
TNFRSF1A-209ENST00000536717 SLC26A11Q86WA9 606 aa17.18■□□□□ 0.34
TNFRSF1A-209ENST00000536717 GPR135Q8IZ08 494 aa17.18■□□□□ 0.34
TNFRSF1A-209ENST00000536717 HMGCLL1Q8TB92 370 aa17.18■□□□□ 0.34
TNFRSF1A-209ENST00000536717 APOBEC4Q8WW27 367 aaKnown RBP17.18■□□□□ 0.34
TNFRSF1A-209ENST00000536717 N4BP2L2Q92802 583 aaPredicted RBP17.18■□□□□ 0.34
TNFRSF1A-209ENST00000536717 TXLNGYQ9BZA5 131 aa17.18■□□□□ 0.34
TNFRSF1A-209ENST00000536717 SPRTNQ9H040 489 aaPredicted RBP17.18■□□□□ 0.34
TNFRSF1A-209ENST00000536717 CCDC68Q9H2F9 335 aa17.18■□□□□ 0.34
TNFRSF1A-209ENST00000536717 TXNDC16Q9P2K2 825 aa17.18■□□□□ 0.34
TNFRSF1A-209ENST00000536717 TUBD1Q9UJT1 453 aa17.18■□□□□ 0.34
TNFRSF1A-209ENST00000536717 POLHQ9Y253 713 aa17.18■□□□□ 0.34
TNFRSF1A-209ENST00000536717 FARSAQ9Y285 508 aaKnown RBP17.18■□□□□ 0.34
TNFRSF1A-209ENST00000536717 CDC14CA4D256 554 aa17.17■□□□□ 0.34
TNFRSF1A-209ENST00000536717 FAM159BA6NKW6 160 aa17.17■□□□□ 0.34
TNFRSF1A-209ENST00000536717 ARHGEF33A8MVX0 844 aa17.17■□□□□ 0.34
TNFRSF1A-209ENST00000536717 PSIP1O75475 530 aaKnown RBP17.17■□□□□ 0.34
TNFRSF1A-209ENST00000536717 HAUS5O94927 633 aa17.17■□□□□ 0.34
TNFRSF1A-209ENST00000536717 PSMB5P28074 263 aa17.17■□□□□ 0.34
TNFRSF1A-209ENST00000536717 RPS15P62841 145 aaKnown RBP17.17■□□□□ 0.34
TNFRSF1A-209ENST00000536717 IL10RAQ13651 578 aa17.17■□□□□ 0.34
TNFRSF1A-209ENST00000536717 KBTBD12Q3ZCT8 623 aa17.17■□□□□ 0.34
TNFRSF1A-209ENST00000536717 SYVN1Q86TM6 617 aa17.17■□□□□ 0.34
TNFRSF1A-209ENST00000536717 CTAGE3PQ8IX95 158 aa17.17■□□□□ 0.34
TNFRSF1A-209ENST00000536717 MAGEC3Q8TD91 643 aa17.17■□□□□ 0.34
TNFRSF1A-209ENST00000536717 KCNJ9Q92806 393 aa17.17■□□□□ 0.34
TNFRSF1A-209ENST00000536717 SPENQ96T58 3664 aaKnown RBP17.17■□□□□ 0.34
TNFRSF1A-209ENST00000536717 A0A087WUV0 522 aaPredicted RBP17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 A0A1W2PPV9 198 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 RIPK2O43353 540 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 HBQ1P09105 142 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 RAB40ALP0C0E4 278 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 NFKB2Q00653 900 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms