RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 WDR47O94967 919 aa16.85■□□□□ 0.29
NXF1-216ENST00000533499 CMPK1P30085 196 aa16.85■□□□□ 0.29
NXF1-216ENST00000533499 GDF5P43026 501 aa16.85■□□□□ 0.29
NXF1-216ENST00000533499 HNMTP50135 292 aa16.85■□□□□ 0.29
NXF1-216ENST00000533499 CLPPQ16740 277 aaPredicted RBP16.85■□□□□ 0.29
NXF1-216ENST00000533499 PTCHD3Q3KNS1 767 aa16.85■□□□□ 0.29
NXF1-216ENST00000533499 PRAMEF13Q5VWM6 474 aa16.85■□□□□ 0.29
NXF1-216ENST00000533499 FOXR1Q6PIV2 292 aa16.85■□□□□ 0.29
NXF1-216ENST00000533499 SH2D5Q6ZV89 423 aa16.85■□□□□ 0.29
NXF1-216ENST00000533499 DGLUCYQ7Z3D6 616 aa16.85■□□□□ 0.29
NXF1-216ENST00000533499 ADCK2Q7Z695 626 aa16.85■□□□□ 0.29
NXF1-216ENST00000533499 EXOC3L1Q86VI1 746 aa16.85■□□□□ 0.29
NXF1-216ENST00000533499 MARCH9Q86YJ5 346 aa16.85■□□□□ 0.29
NXF1-216ENST00000533499 BANPQ8N9N5 519 aa16.85■□□□□ 0.29
NXF1-216ENST00000533499 OR2A14Q96R47 310 aa16.85■□□□□ 0.29
NXF1-216ENST00000533499 STRADBQ9C0K7 418 aa16.85■□□□□ 0.29
NXF1-216ENST00000533499 CNOT10Q9H9A5 744 aaKnown RBP16.85■□□□□ 0.29
NXF1-216ENST00000533499 DYRK1BQ9Y463 629 aa16.85■□□□□ 0.29
NXF1-216ENST00000533499 TLCD2A6NGC4 264 aa16.84■□□□□ 0.29
NXF1-216ENST00000533499 AGPSO00116 658 aa16.84■□□□□ 0.29
NXF1-216ENST00000533499 MAP2K7O14733 419 aa16.84■□□□□ 0.29
NXF1-216ENST00000533499 TAPBPO15533 448 aa16.84■□□□□ 0.29
NXF1-216ENST00000533499 MAP3K7O43318 606 aa16.84■□□□□ 0.29
NXF1-216ENST00000533499 SASH3O75995 380 aa16.84■□□□□ 0.29
NXF1-216ENST00000533499 ERGP11308 486 aa16.84■□□□□ 0.29
NXF1-216ENST00000533499 AGTR2P50052 363 aa16.84■□□□□ 0.29
NXF1-216ENST00000533499 MAGOHP61326 146 aaKnown RBP16.84■□□□□ 0.29
NXF1-216ENST00000533499 SQSTM1Q13501 440 aa16.84■□□□□ 0.29
NXF1-216ENST00000533499 ISXQ2M1V0 245 aa16.84■□□□□ 0.29
NXF1-216ENST00000533499 RAB44Q7Z6P3 723 aaPredicted RBP16.84■□□□□ 0.29
NXF1-216ENST00000533499 THOC6Q86W42 341 aaKnown RBP16.84■□□□□ 0.29
NXF1-216ENST00000533499 ARMC2Q8NEN0 867 aa16.84■□□□□ 0.29
NXF1-216ENST00000533499 HMGCLL1Q8TB92 370 aa16.84■□□□□ 0.29
NXF1-216ENST00000533499 ADAMTS14Q8WXS8 1223 aa16.84■□□□□ 0.29
NXF1-216ENST00000533499 ARL8AQ96BM9 186 aa16.84■□□□□ 0.29
NXF1-216ENST00000533499 FAM111AQ96PZ2 611 aa16.84■□□□□ 0.29
NXF1-216ENST00000533499 PRM3Q9NNZ6 103 aa16.84■□□□□ 0.29
NXF1-216ENST00000533499 MRPS30Q9NP92 439 aaKnown RBP16.84■□□□□ 0.29
NXF1-216ENST00000533499 AKAP7Q9P0M2 348 aaPredicted RBP16.84■□□□□ 0.29
NXF1-216ENST00000533499 EPHA6Q9UF33 1036 aa16.84■□□□□ 0.29
NXF1-216ENST00000533499 SLC22A14Q9Y267 594 aa16.84■□□□□ 0.29
NXF1-216ENST00000533499 ANGPTL3Q9Y5C1 460 aa16.84■□□□□ 0.29
NXF1-216ENST00000533499 MN1Q10571 1320 aaPredicted RBP16.84■□□□□ 0.29
NXF1-216ENST00000533499 SNRNP200O75643 2136 aaKnown RBP16.84■□□□□ 0.29
NXF1-216ENST00000533499 CFAP54Q96N23 3096 aa16.83■□□□□ 0.29
NXF1-216ENST00000533499 A0A0J9YY10 115 aa16.83■□□□□ 0.28
NXF1-216ENST00000533499 A0A1W2PPV9 198 aa16.83■□□□□ 0.28
NXF1-216ENST00000533499 CCDC189A1A4V9 331 aa16.83■□□□□ 0.28
NXF1-216ENST00000533499 STK16O75716 305 aa16.83■□□□□ 0.28
NXF1-216ENST00000533499 CCNDBP1O95273 360 aa16.83■□□□□ 0.28
NXF1-216ENST00000533499 C9P02748 559 aa16.83■□□□□ 0.28
NXF1-216ENST00000533499 THRAP10827 490 aa16.83■□□□□ 0.28
NXF1-216ENST00000533499 MYL2P10916 166 aa16.83■□□□□ 0.28
NXF1-216ENST00000533499 MTHFD2P13995 350 aa16.83■□□□□ 0.28
NXF1-216ENST00000533499 CCND1P24385 295 aa16.83■□□□□ 0.28
NXF1-216ENST00000533499 CSTF2P33240 577 aaKnown RBP eCLIP16.83■□□□□ 0.28
NXF1-216ENST00000533499 LSSP48449 732 aa16.83■□□□□ 0.28
NXF1-216ENST00000533499 YBX1P67809 324 aaKnown RBP16.83■□□□□ 0.28
NXF1-216ENST00000533499 TARDBPQ13148 414 aaKnown RBP eCLIP16.83■□□□□ 0.28
NXF1-216ENST00000533499 SLC5A12Q1EHB4 618 aa16.83■□□□□ 0.28
NXF1-216ENST00000533499 CCDC153Q494R4 210 aa16.83■□□□□ 0.28
NXF1-216ENST00000533499 CDCP2Q5VXM1 449 aa16.83■□□□□ 0.28
NXF1-216ENST00000533499 KIAA1614Q5VZ46 1190 aa16.83■□□□□ 0.28
NXF1-216ENST00000533499 ICE2Q659A1 982 aa16.83■□□□□ 0.28
NXF1-216ENST00000533499 FAM129CQ86XR2 697 aa16.83■□□□□ 0.28
NXF1-216ENST00000533499 SLITRK4Q8IW52 837 aa16.83■□□□□ 0.28
NXF1-216ENST00000533499 LRRC56Q8IYG6 542 aaPredicted RBP16.83■□□□□ 0.28
NXF1-216ENST00000533499 PDPRQ8NCN5 879 aa16.83■□□□□ 0.28
NXF1-216ENST00000533499 OR2L3Q8NG85 312 aa16.83■□□□□ 0.28
NXF1-216ENST00000533499 OR2A1Q8NGT9 310 aa16.83■□□□□ 0.28
NXF1-216ENST00000533499 OR56A3Q8NH54 315 aa16.83■□□□□ 0.28
NXF1-216ENST00000533499 TCP10LQ8TDR4 215 aa16.83■□□□□ 0.28
NXF1-216ENST00000533499 CD180Q99467 661 aa16.83■□□□□ 0.28
NXF1-216ENST00000533499 SELENOSQ9BQE4 189 aa16.83■□□□□ 0.28
NXF1-216ENST00000533499 TMEM79Q9BSE2 394 aa16.83■□□□□ 0.28
NXF1-216ENST00000533499 RAB33BQ9H082 229 aa16.83■□□□□ 0.28
NXF1-216ENST00000533499 PCBD2Q9H0N5 130 aa16.83■□□□□ 0.28
NXF1-216ENST00000533499 INTS7Q9NVH2 962 aaKnown RBP16.83■□□□□ 0.28
NXF1-216ENST00000533499 ZNF446Q9NWS9 450 aa16.83■□□□□ 0.28
NXF1-216ENST00000533499 SLC17A7Q9P2U7 560 aa16.83■□□□□ 0.28
NXF1-216ENST00000533499 OPTCQ9UBM4 332 aa16.83■□□□□ 0.28
NXF1-216ENST00000533499 EMCNQ9ULC0 261 aa16.83■□□□□ 0.28
NXF1-216ENST00000533499 TMCO1Q9UM00 188 aa16.83■□□□□ 0.28
NXF1-216ENST00000533499 IGHV5-51A0A0C4DH38 117 aa16.82■□□□□ 0.28
NXF1-216ENST00000533499 LRRC14BA6NHZ5 514 aa16.82■□□□□ 0.28
NXF1-216ENST00000533499 TMX2-CTNND1H3BSU7 103 aa16.82■□□□□ 0.28
NXF1-216ENST00000533499 HYAL3O43820 417 aaPredicted RBP16.82■□□□□ 0.28
NXF1-216ENST00000533499 PLIN3O60664 434 aa16.82■□□□□ 0.28
NXF1-216ENST00000533499 IPO13O94829 963 aaKnown RBP16.82■□□□□ 0.28
NXF1-216ENST00000533499 DKK1O94907 266 aa16.82■□□□□ 0.28
NXF1-216ENST00000533499 PROCP04070 461 aa16.82■□□□□ 0.28
NXF1-216ENST00000533499 ST6GAL1P15907 406 aa16.82■□□□□ 0.28
NXF1-216ENST00000533499 MAGP20916 626 aa16.82■□□□□ 0.28
NXF1-216ENST00000533499 EEF1DP29692 281 aaKnown RBP16.82■□□□□ 0.28
NXF1-216ENST00000533499 ARL1P40616 181 aaPredicted RBP16.82■□□□□ 0.28
NXF1-216ENST00000533499 ALDH18A1P54886 795 aaKnown RBP16.82■□□□□ 0.28
NXF1-216ENST00000533499 SETDB1Q15047 1291 aa16.82■□□□□ 0.28
NXF1-216ENST00000533499 ZXDCQ2QGD7 858 aaPredicted RBP16.82■□□□□ 0.28
NXF1-216ENST00000533499 CDKL4Q5MAI5 379 aa16.82■□□□□ 0.28
NXF1-216ENST00000533499 AGBL2Q5U5Z8 902 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms