RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 ACSS2Q9NR19 701 aa18.19■□□□□ 0.5
SSH3-209ENST00000532600 WHRNQ9P202 907 aa18.19■□□□□ 0.5
SSH3-209ENST00000532600 DMGDHQ9UI17 866 aaKnown RBP18.19■□□□□ 0.5
SSH3-209ENST00000532600 TSR3Q9UJK0 312 aaKnown RBP18.19■□□□□ 0.5
SSH3-209ENST00000532600 MED16Q9Y2X0 877 aa18.19■□□□□ 0.5
SSH3-209ENST00000532600 PTPN13Q12923 2485 aa18.18■□□□□ 0.5
SSH3-209ENST00000532600 SDR42E2A6NKP2 422 aa18.18■□□□□ 0.5
SSH3-209ENST00000532600 CYSRT1A8MQ03 144 aa18.18■□□□□ 0.5
SSH3-209ENST00000532600 CTSVO60911 334 aa18.18■□□□□ 0.5
SSH3-209ENST00000532600 ATXN8OSP0DMR3 200 aa18.18■□□□□ 0.5
SSH3-209ENST00000532600 OGNP20774 298 aaKnown RBP18.18■□□□□ 0.5
SSH3-209ENST00000532600 AGXTP21549 392 aa18.18■□□□□ 0.5
SSH3-209ENST00000532600 MCM3P25205 808 aa18.18■□□□□ 0.5
SSH3-209ENST00000532600 MLLT10P55197 1068 aa18.18■□□□□ 0.5
SSH3-209ENST00000532600 DHX9Q08211 1270 aaKnown RBP18.18■□□□□ 0.5
SSH3-209ENST00000532600 FASTKQ14296 549 aaKnown RBP18.18■□□□□ 0.5
SSH3-209ENST00000532600 SLC9A5Q14940 896 aa18.18■□□□□ 0.5
SSH3-209ENST00000532600 ANKRD20A4Q4UJ75 823 aa18.18■□□□□ 0.5
SSH3-209ENST00000532600 ACSBG2Q5FVE4 666 aa18.18■□□□□ 0.5
SSH3-209ENST00000532600 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.18■□□□□ 0.5
SSH3-209ENST00000532600 MLIPQ5VWP3 458 aa18.18■□□□□ 0.5
SSH3-209ENST00000532600 NEPROQ6NW34 567 aa18.18■□□□□ 0.5
SSH3-209ENST00000532600 TLDC1Q6P9B6 456 aa18.18■□□□□ 0.5
SSH3-209ENST00000532600 FIGLAQ6QHK4 219 aa18.18■□□□□ 0.5
SSH3-209ENST00000532600 FDCSPQ8NFU4 85 aa18.18■□□□□ 0.5
SSH3-209ENST00000532600 HMGCLL1Q8TB92 370 aa18.18■□□□□ 0.5
SSH3-209ENST00000532600 PROKR1Q8TCW9 393 aa18.18■□□□□ 0.5
SSH3-209ENST00000532600 MIB2Q96AX9 1013 aa18.18■□□□□ 0.5
SSH3-209ENST00000532600 RAD51AP1Q96B01 352 aa18.18■□□□□ 0.5
SSH3-209ENST00000532600 ZNF285Q96NJ3 590 aa18.18■□□□□ 0.5
SSH3-209ENST00000532600 TCF12Q99081 682 aa18.18■□□□□ 0.5
SSH3-209ENST00000532600 DHRS4Q9BTZ2 278 aa18.18■□□□□ 0.5
SSH3-209ENST00000532600 NUDT9Q9BW91 350 aa18.18■□□□□ 0.5
SSH3-209ENST00000532600 PLAC1Q9HBJ0 212 aa18.18■□□□□ 0.5
SSH3-209ENST00000532600 ENAMQ9NRM1 1142 aa18.18■□□□□ 0.5
SSH3-209ENST00000532600 SLC39A10Q9ULF5 831 aa18.18■□□□□ 0.5
SSH3-209ENST00000532600 FAM237BA0A1B0GVD1 139 aa18.17■□□□□ 0.5
SSH3-209ENST00000532600 C9J4A7 227 aa18.17■□□□□ 0.5
SSH3-209ENST00000532600 MASP2O00187 686 aa18.17■□□□□ 0.5
SSH3-209ENST00000532600 KPNA5O15131 536 aa18.17■□□□□ 0.5
SSH3-209ENST00000532600 MED26O95402 600 aa18.17■□□□□ 0.5
SSH3-209ENST00000532600 ESR1P03372 595 aa18.17■□□□□ 0.5
SSH3-209ENST00000532600 UMODP07911 640 aa18.17■□□□□ 0.5
SSH3-209ENST00000532600 DCDP81605 110 aaKnown RBP18.17■□□□□ 0.5
SSH3-209ENST00000532600 NADK2Q4G0N4 442 aa18.17■□□□□ 0.5
SSH3-209ENST00000532600 NKAIN1Q4KMZ8 207 aa18.17■□□□□ 0.5
SSH3-209ENST00000532600 RNF187Q5TA31 235 aaPredicted RBP18.17■□□□□ 0.5
SSH3-209ENST00000532600 ARMC3Q5W041 872 aa18.17■□□□□ 0.5
SSH3-209ENST00000532600 ZNF549Q6P9A3 640 aa18.17■□□□□ 0.5
SSH3-209ENST00000532600 MRGPREQ86SM8 312 aa18.17■□□□□ 0.5
SSH3-209ENST00000532600 SDCCAG8Q86SQ7 713 aaPredicted RBP18.17■□□□□ 0.5
SSH3-209ENST00000532600 DENND6AQ8IWF6 608 aa18.17■□□□□ 0.5
SSH3-209ENST00000532600 DTWD1Q8N5C7 304 aa18.17■□□□□ 0.5
SSH3-209ENST00000532600 TEX19Q8NA77 164 aa18.17■□□□□ 0.5
SSH3-209ENST00000532600 GIMAP7Q8NHV1 300 aa18.17■□□□□ 0.5
SSH3-209ENST00000532600 SKA2Q8WVK7 121 aaPredicted RBP18.17■□□□□ 0.5
SSH3-209ENST00000532600 SLC22A18Q96BI1 424 aa18.17■□□□□ 0.5
SSH3-209ENST00000532600 ZNF669Q96BR6 464 aaPredicted RBP18.17■□□□□ 0.5
SSH3-209ENST00000532600 SYNPO2LQ9H987 977 aa18.17■□□□□ 0.5
SSH3-209ENST00000532600 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.17■□□□□ 0.5
SSH3-209ENST00000532600 SRPK3Q9UPE1 567 aa18.17■□□□□ 0.5
SSH3-209ENST00000532600 UTP11Q9Y3A2 253 aaKnown RBP18.17■□□□□ 0.5
SSH3-209ENST00000532600 KLK4Q9Y5K2 254 aa18.17■□□□□ 0.5
SSH3-209ENST00000532600 ARHGEF33A8MVX0 844 aa18.16■□□□□ 0.5
SSH3-209ENST00000532600 ERGP11308 486 aa18.16■□□□□ 0.5
SSH3-209ENST00000532600 PKMP14618 531 aaKnown RBP18.16■□□□□ 0.5
SSH3-209ENST00000532600 ATP5DP30049 168 aa18.16■□□□□ 0.5
SSH3-209ENST00000532600 OTX2P32243 289 aa18.16■□□□□ 0.5
SSH3-209ENST00000532600 CLCN7P51798 805 aa18.16■□□□□ 0.5
SSH3-209ENST00000532600 PGDP52209 483 aa18.16■□□□□ 0.5
SSH3-209ENST00000532600 SRSF1Q07955 248 aaKnown RBP eCLIP18.16■□□□□ 0.5
SSH3-209ENST00000532600 SF1Q15637 639 aaKnown RBP18.16■□□□□ 0.5
SSH3-209ENST00000532600 CYP2A13Q16696 494 aa18.16■□□□□ 0.5
SSH3-209ENST00000532600 BBS9Q3SYG4 887 aa18.16■□□□□ 0.5
SSH3-209ENST00000532600 CASC4Q6P4E1 433 aa18.16■□□□□ 0.5
SSH3-209ENST00000532600 COX15Q7KZN9 410 aa18.16■□□□□ 0.5
SSH3-209ENST00000532600 PPP1R32Q7Z5V6 425 aa18.16■□□□□ 0.5
SSH3-209ENST00000532600 OR2A1Q8NGT9 310 aa18.16■□□□□ 0.5
SSH3-209ENST00000532600 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.16■□□□□ 0.5
SSH3-209ENST00000532600 MIPEPQ99797 713 aa18.16■□□□□ 0.5
SSH3-209ENST00000532600 RAB11FIP5Q9BXF6 653 aa18.16■□□□□ 0.5
SSH3-209ENST00000532600 RAB17Q9H0T7 212 aa18.16■□□□□ 0.5
SSH3-209ENST00000532600 PTRH2Q9Y3E5 179 aaKnown RBP18.16■□□□□ 0.5
SSH3-209ENST00000532600 COL12A1Q99715 3063 aa18.16■□□□□ 0.5
SSH3-209ENST00000532600 ANKRD12Q6UB98 2062 aa18.15■□□□□ 0.5
SSH3-209ENST00000532600 CLEC18AA5D8T8 446 aa18.15■□□□□ 0.5
SSH3-209ENST00000532600 A6NL46 340 aa18.15■□□□□ 0.5
SSH3-209ENST00000532600 H3BMM5 538 aa18.15■□□□□ 0.5
SSH3-209ENST00000532600 SMAPO00193 183 aa18.15■□□□□ 0.5
SSH3-209ENST00000532600 ONECUT2O95948 504 aa18.15■□□□□ 0.5
SSH3-209ENST00000532600 CHRM3P20309 590 aa18.15■□□□□ 0.5
SSH3-209ENST00000532600 CD97P48960 835 aa18.15■□□□□ 0.5
SSH3-209ENST00000532600 GUCY2DQ02846 1103 aa18.15■□□□□ 0.5
SSH3-209ENST00000532600 CTBP1Q13363 440 aa18.15■□□□□ 0.5
SSH3-209ENST00000532600 SSPNQ14714 243 aa18.15■□□□□ 0.5
SSH3-209ENST00000532600 FASTKD3Q14CZ7 662 aaKnown RBP18.15■□□□□ 0.5
SSH3-209ENST00000532600 HP1BP3Q5SSJ5 553 aaPredicted RBP18.15■□□□□ 0.5
SSH3-209ENST00000532600 ZNF470Q6ECI4 717 aa18.15■□□□□ 0.5
SSH3-209ENST00000532600 FRMPD2BQ6IN97 320 aa18.15■□□□□ 0.5
SSH3-209ENST00000532600 CLEC18BQ6UXF7 455 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms