RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 TTC9BQ8N6N2 239 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 NDNFQ8TB73 568 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 ZCCHC14Q8WYQ9 949 aaKnown RBP5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 OSTF1Q92882 214 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 UBE2FQ969M7 185 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 TAAR6Q96RI8 345 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 RBM4BQ9BQ04 359 aaKnown RBP5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 RBM4Q9BWF3 364 aaKnown RBP5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 KATNBL1Q9H079 304 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 TMEM185BQ9H7F4 350 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 MEAF6Q9HAF1 191 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 VSX1Q9NZR4 365 aaPredicted RBP5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 DNMT1P26358 1616 aaKnown RBP5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 EIF3AQ14152 1382 aaKnown RBP5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 KIAA1107Q9UPP5 1409 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 GOLGA6L10A6NI86 522 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 ANKRD66B4E2M5 251 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 H3BS24 57 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 CES2O00748 559 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 PTGESO14684 152 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 PPM1DO15297 605 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 TLX3O43711 291 aaPredicted RBP5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 PEX1O43933 1283 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 NOBOXO60393 691 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 MYO1DO94832 1006 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 NID1P14543 1247 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 FSTP19883 344 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 TGM2P21980 687 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 ADORA2AP29274 412 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 CSNK1EP49674 416 aaKnown RBP5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 GPR143P51810 404 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 ZNF75DP51815 510 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 ITGA1P56199 1179 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 VBP1P61758 197 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 MAPRE2Q15555 327 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 SKIDA1Q1XH10 827 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 PPP6R3Q5H9R7 873 aaPredicted RBP5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 VASNQ6EMK4 673 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 BLOC1S2Q6QNY1 142 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 ENPP7Q6UWV6 458 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 STXBP4Q6ZWJ1 553 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 ADGRD2Q7Z7M1 963 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 CLEC14AQ86T13 490 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 AMIGO3Q86WK7 504 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 FOXRED2Q8IWF2 684 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 FUKQ8N0W3 1084 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 SLC25A41Q8N5S1 370 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 ANKRD13CQ8N6S4 541 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 BBS10Q8TAM1 723 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 WIPF2Q8TF74 440 aaPredicted RBP5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 LPIN2Q92539 896 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 LENG9Q96B70 501 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 SPATA33Q96N06 139 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 NPAS2Q99743 824 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 OLFM1Q99784 485 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 TMEM43Q9BTV4 400 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 C9orf16Q9BUW7 83 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 NUF2Q9BZD4 464 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 TRIM4Q9C037 500 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 SLC39A1Q9NY26 324 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 GCNT4Q9P109 453 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 UPB1Q9UBR1 384 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 CYTH4Q9UIA0 394 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 SLC25A13Q9UJS0 675 aa5.07□□□□□ -1.6
ECHDC1-222ENST00000531967 FAM149AA5PLN7 773 aa5.06□□□□□ -1.6
ECHDC1-222ENST00000531967 ABCD4O14678 606 aa5.06□□□□□ -1.6
ECHDC1-222ENST00000531967 FCMRO60667 390 aa5.06□□□□□ -1.6
ECHDC1-222ENST00000531967 CREG1O75629 220 aa5.06□□□□□ -1.6
ECHDC1-222ENST00000531967 IL18BPO95998 194 aa5.06□□□□□ -1.6
ECHDC1-222ENST00000531967 MBP02144 154 aa5.06□□□□□ -1.6
ECHDC1-222ENST00000531967 MT-ND1P03886 318 aa5.06□□□□□ -1.6
ECHDC1-222ENST00000531967 HIST1H2ABP04908 130 aa5.06□□□□□ -1.6
ECHDC1-222ENST00000531967 SPP1P10451 314 aa5.06□□□□□ -1.6
ECHDC1-222ENST00000531967 FCGR2AP12318 317 aa5.06□□□□□ -1.6
ECHDC1-222ENST00000531967 FOSL2P15408 326 aa5.06□□□□□ -1.6
ECHDC1-222ENST00000531967 HIST1H2ADP20671 130 aa5.06□□□□□ -1.6
ECHDC1-222ENST00000531967 ITGAXP20702 1163 aa5.06□□□□□ -1.6
ECHDC1-222ENST00000531967 HNF1AP20823 631 aa5.06□□□□□ -1.6
ECHDC1-222ENST00000531967 HTR2AP28223 471 aa5.06□□□□□ -1.6
ECHDC1-222ENST00000531967 PPP2R1AP30153 589 aa5.06□□□□□ -1.6
ECHDC1-222ENST00000531967 FCGR2BP31994 310 aaPredicted RBP5.06□□□□□ -1.6
ECHDC1-222ENST00000531967 GCKP35557 465 aa5.06□□□□□ -1.6
ECHDC1-222ENST00000531967 PPP1R2P41236 205 aa5.06□□□□□ -1.6
ECHDC1-222ENST00000531967 MTHFSP49914 203 aa5.06□□□□□ -1.6
ECHDC1-222ENST00000531967 RPS15P62841 145 aaKnown RBP5.06□□□□□ -1.6
ECHDC1-222ENST00000531967 SNCBQ16143 134 aa5.06□□□□□ -1.6
ECHDC1-222ENST00000531967 RPE65Q16518 533 aa5.06□□□□□ -1.6
ECHDC1-222ENST00000531967 HKDC1Q2TB90 917 aa5.06□□□□□ -1.6
ECHDC1-222ENST00000531967 TEX44Q53QW1 395 aa5.06□□□□□ -1.6
ECHDC1-222ENST00000531967 BEX5Q5H9J7 111 aa5.06□□□□□ -1.6
ECHDC1-222ENST00000531967 MLIPQ5VWP3 458 aa5.06□□□□□ -1.6
ECHDC1-222ENST00000531967 RNF43Q68DV7 783 aa5.06□□□□□ -1.6
ECHDC1-222ENST00000531967 TMEM200BQ69YZ2 307 aa5.06□□□□□ -1.6
ECHDC1-222ENST00000531967 THOC7Q6I9Y2 204 aaKnown RBP5.06□□□□□ -1.6
ECHDC1-222ENST00000531967 PPP1R2P3Q6NXS1 205 aa5.06□□□□□ -1.6
ECHDC1-222ENST00000531967 ACSM6Q6P461 480 aa5.06□□□□□ -1.6
ECHDC1-222ENST00000531967 SLC30A10Q6XR72 485 aa5.06□□□□□ -1.6
ECHDC1-222ENST00000531967 COLCA1Q6ZS62 124 aa5.06□□□□□ -1.6
ECHDC1-222ENST00000531967 KCTD8Q6ZWB6 473 aa5.06□□□□□ -1.6
ECHDC1-222ENST00000531967 EIF3MQ7L2H7 374 aaKnown RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms