RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 POLR3HQ9Y535 204 aaPredicted RBP11.27□□□□□ -0.61
USP35-207ENST00000530546 KIAA1671Q9BY89 1806 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 ASPDHA6ND91 283 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 H0YAE9 185 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 ASNA1O43681 348 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 TPST1O60507 370 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 ABCB7O75027 752 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 OTCP00480 354 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 G6PDP11413 515 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 SLC2A4P14672 509 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 GSTM2P28161 218 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 BMPR1AP36894 532 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 POLR2JP52435 117 aaKnown RBP11.26□□□□□ -0.61
USP35-207ENST00000530546 HMGCS1Q01581 520 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 TRAF3Q13114 568 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 DNASE1L3Q13609 305 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 CRY1Q16526 586 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 AP5B1Q2VPB7 878 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 CYBRD1Q53TN4 286 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 ARSIQ5FYB1 569 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 SERPINA13PQ6UXR4 307 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 ADIPOR2Q86V24 386 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 SPPL2CQ8IUH8 684 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 LEMD2Q8NC56 503 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 PIK3C3Q8NEB9 887 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 OR2A12Q8NGT7 310 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 TMEM74Q96NL1 305 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 HOPXQ9BPY8 73 aaPredicted RBP11.26□□□□□ -0.61
USP35-207ENST00000530546 TP63Q9H3D4 680 aaPredicted RBP11.26□□□□□ -0.61
USP35-207ENST00000530546 SATB2Q9UPW6 733 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 CHD7Q9P2D1 2997 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 A0A1W2PP18 115 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 NR4A1P22736 598 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 SLC6A2P23975 617 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 POLR2IP36954 125 aaKnown RBP11.26□□□□□ -0.61
USP35-207ENST00000530546 MAPK10P53779 464 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 IFITM3Q01628 133 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 CHRNEQ04844 493 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 AASDHQ4L235 1098 aaPredicted RBP11.26□□□□□ -0.61
USP35-207ENST00000530546 LDLRAP1Q5SW96 308 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 XAF1Q6GPH4 301 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 ARMC8Q8IUR7 673 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 LACC1Q8IV20 430 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 KIAA2013Q8IYS2 634 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 SPPL3Q8TCT6 385 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 ISG20Q96AZ6 181 aaKnown RBP11.26□□□□□ -0.61
USP35-207ENST00000530546 ULK4Q96C45 1275 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 RHBDF1Q96CC6 855 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 LYSMD1Q96S90 227 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 CD244Q9BZW8 370 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 LHPPQ9H008 270 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 MARCH7Q9H992 704 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 ARL15Q9NXU5 204 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 KCTD5Q9NXV2 234 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 ENPP5Q9UJA9 477 aa11.26□□□□□ -0.61
USP35-207ENST00000530546 DHRS12A0PJE2 317 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 LOC730098B7Z3J9 87 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 LEFTY1O75610 366 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 PSMA4P25789 261 aaKnown RBP11.25□□□□□ -0.61
USP35-207ENST00000530546 SPINT3P49223 89 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 DGKQP52824 942 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 RPL38P63173 70 aaKnown RBP11.25□□□□□ -0.61
USP35-207ENST00000530546 RFTN2Q52LD8 501 aaPredicted RBP11.25□□□□□ -0.61
USP35-207ENST00000530546 FBXO46Q6PJ61 603 aaPredicted RBP11.25□□□□□ -0.61
USP35-207ENST00000530546 Q6ZVL8 140 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 DSG4Q86SJ6 1040 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 OFCC1Q8IZS5 231 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 BEND7Q8N7W2 519 aaPredicted RBP11.25□□□□□ -0.61
USP35-207ENST00000530546 CHAC2Q8WUX2 184 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 RAD9AQ99638 391 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 ZFP14Q9HCL3 533 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 INTS7Q9NVH2 962 aaKnown RBP11.25□□□□□ -0.61
USP35-207ENST00000530546 PRKAG2Q9UGJ0 569 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 TMPRSS11EQ9UL52 423 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 USP22Q9UPT9 525 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 ERVW-1Q9UQF0 538 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 TMA7Q9Y2S6 64 aaKnown RBP11.25□□□□□ -0.61
USP35-207ENST00000530546 TESMINQ9Y4I5 508 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 ISPDA4D126 451 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 ACOX3O15254 700 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 SCO2O43819 266 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 UGT2B11O75310 529 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 BCAS1O75363 584 aaPredicted RBP11.25□□□□□ -0.61
USP35-207ENST00000530546 NCK1P16333 377 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 EEF1B2P24534 225 aaKnown RBP11.25□□□□□ -0.61
USP35-207ENST00000530546 RPIAP49247 311 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 PLA2G16P53816 162 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 RCAN2Q14206 197 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 SIGIRRQ6IA17 410 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 SULT1C3Q6IMI6 304 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 CRTC3Q6UUV7 619 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 HSD11B1LQ7Z5J1 315 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 VRK3Q8IV63 474 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 ZCCHC7Q8N3Z6 543 aaKnown RBP11.25□□□□□ -0.61
USP35-207ENST00000530546 MFSD4AQ8N468 514 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 PROKR1Q8TCW9 393 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 PYCR2Q96C36 320 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 MCCC1Q96RQ3 725 aaPredicted RBP11.25□□□□□ -0.61
USP35-207ENST00000530546 OR2B2Q9GZK3 357 aa11.25□□□□□ -0.61
USP35-207ENST00000530546 SLC52A3Q9NQ40 469 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms