RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 GPBAR1Q8TDU6 330 aa13.97□□□□□ -0.17
TTC39A-216ENST00000530004 MARK4Q96L34 752 aa13.97□□□□□ -0.17
TTC39A-216ENST00000530004 NCDNQ9UBB6 729 aa13.97□□□□□ -0.17
TTC39A-216ENST00000530004 SPASTQ9UBP0 616 aa13.97□□□□□ -0.17
TTC39A-216ENST00000530004 KCNK6Q9Y257 313 aa13.97□□□□□ -0.17
TTC39A-216ENST00000530004 SLC22A14Q9Y267 594 aa13.97□□□□□ -0.17
TTC39A-216ENST00000530004 VPS13AQ96RL7 3174 aa13.97□□□□□ -0.17
TTC39A-216ENST00000530004 DMDP11532 3685 aa13.97□□□□□ -0.17
TTC39A-216ENST00000530004 A0A1B0GTQ1 180 aa13.96□□□□□ -0.17
TTC39A-216ENST00000530004 DFNA5O60443 496 aa13.96□□□□□ -0.17
TTC39A-216ENST00000530004 SDC3O75056 442 aa13.96□□□□□ -0.17
TTC39A-216ENST00000530004 PIAS2O75928 621 aa13.96□□□□□ -0.17
TTC39A-216ENST00000530004 DNAJC8O75937 253 aaPredicted RBP13.96□□□□□ -0.17
TTC39A-216ENST00000530004 HGFP14210 728 aa13.96□□□□□ -0.17
TTC39A-216ENST00000530004 IMPA1P29218 277 aa13.96□□□□□ -0.17
TTC39A-216ENST00000530004 SPEM2Q0P670 501 aa13.96□□□□□ -0.17
TTC39A-216ENST00000530004 TCEA2Q15560 299 aa13.96□□□□□ -0.17
TTC39A-216ENST00000530004 UNC5DQ6UXZ4 953 aa13.96□□□□□ -0.17
TTC39A-216ENST00000530004 LARP4Q71RC2 724 aaKnown RBP eCLIP13.96□□□□□ -0.17
TTC39A-216ENST00000530004 NRROSQ86YC3 692 aa13.96□□□□□ -0.17
TTC39A-216ENST00000530004 KLHL29Q96CT2 875 aa13.96□□□□□ -0.17
TTC39A-216ENST00000530004 NTMT1Q9BV86 223 aa13.96□□□□□ -0.17
TTC39A-216ENST00000530004 OSGEPL1Q9H4B0 414 aa13.96□□□□□ -0.17
TTC39A-216ENST00000530004 AKTIPQ9H8T0 292 aa13.96□□□□□ -0.17
TTC39A-216ENST00000530004 IL21RQ9HBE5 538 aa13.96□□□□□ -0.17
TTC39A-216ENST00000530004 DNAJC11Q9NVH1 559 aa13.96□□□□□ -0.17
TTC39A-216ENST00000530004 ASF1AQ9Y294 204 aa13.96□□□□□ -0.17
TTC39A-216ENST00000530004 CAPN7Q9Y6W3 813 aa13.96□□□□□ -0.17
TTC39A-216ENST00000530004 LNP1A1A4G5 178 aa13.96□□□□□ -0.18
TTC39A-216ENST00000530004 MYO1CO00159 1063 aa13.96□□□□□ -0.18
TTC39A-216ENST00000530004 IFRD1O00458 451 aaPredicted RBP13.96□□□□□ -0.18
TTC39A-216ENST00000530004 HNRNPCL1O60812 293 aaKnown RBP13.96□□□□□ -0.18
TTC39A-216ENST00000530004 LRP3O75074 770 aa13.96□□□□□ -0.18
TTC39A-216ENST00000530004 CER1O95813 267 aa13.96□□□□□ -0.18
TTC39A-216ENST00000530004 CELA2BP08218 269 aaPredicted RBP13.96□□□□□ -0.18
TTC39A-216ENST00000530004 SLC35G4P0C7Q5 338 aa13.96□□□□□ -0.18
TTC39A-216ENST00000530004 EBLN1P0CF75 366 aa13.96□□□□□ -0.18
TTC39A-216ENST00000530004 RPL10P27635 214 aaKnown RBP13.96□□□□□ -0.18
TTC39A-216ENST00000530004 HMOX2P30519 316 aa13.96□□□□□ -0.18
TTC39A-216ENST00000530004 ACTR1BP42025 376 aa13.96□□□□□ -0.18
TTC39A-216ENST00000530004 RASSF2P50749 326 aa13.96□□□□□ -0.18
TTC39A-216ENST00000530004 CLCNKAP51800 687 aa13.96□□□□□ -0.18
TTC39A-216ENST00000530004 ACTR1AP61163 376 aa13.96□□□□□ -0.18
TTC39A-216ENST00000530004 BNIP3Q12983 259 aa13.96□□□□□ -0.18
TTC39A-216ENST00000530004 KLF10Q13118 480 aa13.96□□□□□ -0.18
TTC39A-216ENST00000530004 NAE1Q13564 534 aa13.96□□□□□ -0.18
TTC39A-216ENST00000530004 ELOCQ15369 112 aa13.96□□□□□ -0.18
TTC39A-216ENST00000530004 SCIMPQ6UWF3 145 aa13.96□□□□□ -0.18
TTC39A-216ENST00000530004 ZNF548Q8NEK5 533 aaPredicted RBP13.96□□□□□ -0.18
TTC39A-216ENST00000530004 OR9A1PQ8NGU1 263 aa13.96□□□□□ -0.18
TTC39A-216ENST00000530004 OR2I1PQ8NGU4 316 aa13.96□□□□□ -0.18
TTC39A-216ENST00000530004 MAGEC3Q8TD91 643 aa13.96□□□□□ -0.18
TTC39A-216ENST00000530004 LMX1AQ8TE12 382 aa13.96□□□□□ -0.18
TTC39A-216ENST00000530004 TFGQ92734 400 aaPredicted RBP13.96□□□□□ -0.18
TTC39A-216ENST00000530004 MED8Q96G25 268 aa13.96□□□□□ -0.18
TTC39A-216ENST00000530004 GTPBP2Q9BX10 602 aaKnown RBP13.96□□□□□ -0.18
TTC39A-216ENST00000530004 GSDMCQ9BYG8 508 aa13.96□□□□□ -0.18
TTC39A-216ENST00000530004 ZNF385DQ9H6B1 395 aa13.96□□□□□ -0.18
TTC39A-216ENST00000530004 ACTR8Q9H981 624 aa13.96□□□□□ -0.18
TTC39A-216ENST00000530004 PFDN4Q9NQP4 134 aa13.96□□□□□ -0.18
TTC39A-216ENST00000530004 SEMA4GQ9NTN9 838 aa13.96□□□□□ -0.18
TTC39A-216ENST00000530004 TRPS1Q9UHF7 1281 aa13.96□□□□□ -0.18
TTC39A-216ENST00000530004 POLG2Q9UHN1 485 aa13.96□□□□□ -0.18
TTC39A-216ENST00000530004 TAGLN3Q9UI15 199 aa13.96□□□□□ -0.18
TTC39A-216ENST00000530004 LNPEPQ9UIQ6 1025 aa13.96□□□□□ -0.18
TTC39A-216ENST00000530004 ACSL5Q9ULC5 683 aa13.96□□□□□ -0.18
TTC39A-216ENST00000530004 RNF11Q9Y3C5 154 aa13.96□□□□□ -0.18
TTC39A-216ENST00000530004 PI4KAP42356 2102 aa13.96□□□□□ -0.18
TTC39A-216ENST00000530004 YKT6O15498 198 aa13.95□□□□□ -0.18
TTC39A-216ENST00000530004 AQP9O43315 295 aa13.95□□□□□ -0.18
TTC39A-216ENST00000530004 CLDN9O95484 217 aa13.95□□□□□ -0.18
TTC39A-216ENST00000530004 EPHA8P29322 1005 aaPredicted RBP13.95□□□□□ -0.18
TTC39A-216ENST00000530004 HTR6P50406 440 aa13.95□□□□□ -0.18
TTC39A-216ENST00000530004 ATXN3P54252 364 aaPredicted RBP13.95□□□□□ -0.18
TTC39A-216ENST00000530004 NHLH1Q02575 133 aa13.95□□□□□ -0.18
TTC39A-216ENST00000530004 SF3A2Q15428 464 aaKnown RBP13.95□□□□□ -0.18
TTC39A-216ENST00000530004 SLC30A9Q6PML9 568 aa13.95□□□□□ -0.18
TTC39A-216ENST00000530004 CHSY3Q70JA7 882 aa13.95□□□□□ -0.18
TTC39A-216ENST00000530004 ASRGL1Q7L266 308 aa13.95□□□□□ -0.18
TTC39A-216ENST00000530004 TAF8Q7Z7C8 310 aa13.95□□□□□ -0.18
TTC39A-216ENST00000530004 THOC6Q86W42 341 aaKnown RBP13.95□□□□□ -0.18
TTC39A-216ENST00000530004 MYLK4Q86YV6 388 aaPredicted RBP13.95□□□□□ -0.18
TTC39A-216ENST00000530004 KIF2BQ8N4N8 673 aa13.95□□□□□ -0.18
TTC39A-216ENST00000530004 CHCHD4Q8N4Q1 142 aa13.95□□□□□ -0.18
TTC39A-216ENST00000530004 CPSF7Q8N684 471 aaKnown RBP13.95□□□□□ -0.18
TTC39A-216ENST00000530004 PPFIBP2Q8ND30 876 aa13.95□□□□□ -0.18
TTC39A-216ENST00000530004 OR5AR1Q8NGP9 310 aa13.95□□□□□ -0.18
TTC39A-216ENST00000530004 TUBGCP3Q96CW5 907 aa13.95□□□□□ -0.18
TTC39A-216ENST00000530004 SLC7A6OSQ96CW6 309 aaPredicted RBP13.95□□□□□ -0.18
TTC39A-216ENST00000530004 INTS7Q9NVH2 962 aaKnown RBP13.95□□□□□ -0.18
TTC39A-216ENST00000530004 UCKL1Q9NWZ5 548 aa13.95□□□□□ -0.18
TTC39A-216ENST00000530004 COPG1Q9Y678 874 aaKnown RBP13.95□□□□□ -0.18
TTC39A-216ENST00000530004 CFAP20Q9Y6A4 193 aaKnown RBP13.95□□□□□ -0.18
TTC39A-216ENST00000530004 LRP4O75096 1905 aa13.95□□□□□ -0.18
TTC39A-216ENST00000530004 ZFC3H1O60293 1989 aaKnown RBP13.95□□□□□ -0.18
TTC39A-216ENST00000530004 PCDH15Q96QU1 1955 aa13.95□□□□□ -0.18
TTC39A-216ENST00000530004 UBDO15205 165 aa13.94□□□□□ -0.18
TTC39A-216ENST00000530004 VPS4BO75351 444 aa13.94□□□□□ -0.18
TTC39A-216ENST00000530004 IDSP22304 550 aa13.94□□□□□ -0.18
TTC39A-216ENST00000530004 CPA2P48052 419 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms