RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 ZNF140P52738 457 aaPredicted RBP9.95□□□□□ -0.82
COPB1-207ENST00000529866 HADHBP55084 474 aaKnown RBP9.95□□□□□ -0.82
COPB1-207ENST00000529866 CSNK1G2P78368 415 aa9.95□□□□□ -0.82
COPB1-207ENST00000529866 OLIG2Q13516 323 aa9.95□□□□□ -0.82
COPB1-207ENST00000529866 KRTCAP3Q53RY4 240 aa9.95□□□□□ -0.82
COPB1-207ENST00000529866 ATG9BQ674R7 924 aa9.95□□□□□ -0.82
COPB1-207ENST00000529866 ITPRIPL1Q6GPH6 555 aa9.95□□□□□ -0.82
COPB1-207ENST00000529866 TAS2R42Q7RTR8 314 aa9.95□□□□□ -0.82
COPB1-207ENST00000529866 SERPINA9Q86WD7 417 aa9.95□□□□□ -0.82
COPB1-207ENST00000529866 CA5BP1Q8WTZ4 195 aa9.95□□□□□ -0.82
COPB1-207ENST00000529866 PSMF1Q92530 271 aa9.95□□□□□ -0.82
COPB1-207ENST00000529866 ELMO1Q92556 727 aa9.95□□□□□ -0.82
COPB1-207ENST00000529866 LRRC45Q96CN5 670 aa9.95□□□□□ -0.82
COPB1-207ENST00000529866 QKIQ96PU8 341 aaKnown RBP eCLIP9.95□□□□□ -0.827e-9■■■■■ 37.3
COPB1-207ENST00000529866 FERMT1Q9BQL6 677 aa9.95□□□□□ -0.82
COPB1-207ENST00000529866 ENKD1Q9H0I2 346 aa9.95□□□□□ -0.82
COPB1-207ENST00000529866 FAM96AQ9H5X1 160 aa9.95□□□□□ -0.82
COPB1-207ENST00000529866 ZNF304Q9HCX3 659 aa9.95□□□□□ -0.82
COPB1-207ENST00000529866 ENAMQ9NRM1 1142 aa9.95□□□□□ -0.82
COPB1-207ENST00000529866 C14orf105Q9NVL8 296 aa9.95□□□□□ -0.82
COPB1-207ENST00000529866 DDX56Q9NY93 547 aaKnown RBP9.95□□□□□ -0.82
COPB1-207ENST00000529866 INTUQ9ULD6 942 aa9.95□□□□□ -0.82
COPB1-207ENST00000529866 KLHL20Q9Y2M5 609 aa9.95□□□□□ -0.82
COPB1-207ENST00000529866 ALG6Q9Y672 507 aa9.95□□□□□ -0.82
COPB1-207ENST00000529866 ANKRD12Q6UB98 2062 aa9.95□□□□□ -0.82
COPB1-207ENST00000529866 ABCA4P78363 2273 aa9.94□□□□□ -0.82
COPB1-207ENST00000529866 DOCK10Q96BY6 2186 aa9.94□□□□□ -0.82
COPB1-207ENST00000529866 A0A1W2PQ72 361 aa9.94□□□□□ -0.82
COPB1-207ENST00000529866 FAM227AF5H4B4 570 aa9.94□□□□□ -0.82
COPB1-207ENST00000529866 F8W8V4 182 aa9.94□□□□□ -0.82
COPB1-207ENST00000529866 PRPF4O43172 522 aaKnown RBP eCLIP9.94□□□□□ -0.826e-8■■■■■ 28.1
COPB1-207ENST00000529866 PSTPIP1O43586 416 aa9.94□□□□□ -0.82
COPB1-207ENST00000529866 SRPX2O60687 465 aaPredicted RBP9.94□□□□□ -0.82
COPB1-207ENST00000529866 FKBP9O95302 570 aa9.94□□□□□ -0.82
COPB1-207ENST00000529866 AGTP01019 485 aa9.94□□□□□ -0.82
COPB1-207ENST00000529866 TPM1P09493 284 aa9.94□□□□□ -0.82
COPB1-207ENST00000529866 ICAM2P13598 275 aa9.94□□□□□ -0.82
COPB1-207ENST00000529866 HOXB4P17483 251 aaPredicted RBP9.94□□□□□ -0.82
COPB1-207ENST00000529866 FBLP22087 321 aaKnown RBP9.94□□□□□ -0.82
COPB1-207ENST00000529866 SLC1A1P43005 524 aa9.94□□□□□ -0.82
COPB1-207ENST00000529866 EMP2P54851 167 aa9.94□□□□□ -0.82
COPB1-207ENST00000529866 EEF1A2Q05639 463 aaKnown RBP9.94□□□□□ -0.82
COPB1-207ENST00000529866 DNAJC21Q5F1R6 531 aaKnown RBP9.94□□□□□ -0.82
COPB1-207ENST00000529866 ZNF766Q5HY98 468 aa9.94□□□□□ -0.82
COPB1-207ENST00000529866 Q6ZPB1 254 aaPredicted RBP9.94□□□□□ -0.82
COPB1-207ENST00000529866 SPPL2CQ8IUH8 684 aa9.94□□□□□ -0.82
COPB1-207ENST00000529866 MMP21Q8N119 569 aa9.94□□□□□ -0.82
COPB1-207ENST00000529866 CLDN19Q8N6F1 224 aa9.94□□□□□ -0.82
COPB1-207ENST00000529866 ACBD4Q8NC06 268 aa9.94□□□□□ -0.82
COPB1-207ENST00000529866 CHDHQ8NE62 594 aaPredicted RBP9.94□□□□□ -0.82
COPB1-207ENST00000529866 ADAMTS18Q8TE60 1221 aa9.94□□□□□ -0.82
COPB1-207ENST00000529866 PHF10Q8WUB8 498 aaKnown RBP9.94□□□□□ -0.82
COPB1-207ENST00000529866 P3H4Q92791 437 aa9.94□□□□□ -0.82
COPB1-207ENST00000529866 GPR137Q96N19 417 aa9.94□□□□□ -0.82
COPB1-207ENST00000529866 ZNF285Q96NJ3 590 aa9.94□□□□□ -0.82
COPB1-207ENST00000529866 MESP1Q9BRJ9 268 aa9.94□□□□□ -0.82
COPB1-207ENST00000529866 GBA3Q9H227 469 aa9.94□□□□□ -0.82
COPB1-207ENST00000529866 SMARCAL1Q9NZC9 954 aa9.94□□□□□ -0.82
COPB1-207ENST00000529866 COQ3Q9NZJ6 369 aa9.94□□□□□ -0.82
COPB1-207ENST00000529866 FEZ2Q9UHY8 353 aaPredicted RBP9.94□□□□□ -0.82
COPB1-207ENST00000529866 AAR2Q9Y312 384 aaKnown RBP9.94□□□□□ -0.82
COPB1-207ENST00000529866 ACANP16112 2415 aa9.94□□□□□ -0.82
COPB1-207ENST00000529866 IGLV3-12A0A075B6K2 115 aa9.93□□□□□ -0.82
COPB1-207ENST00000529866 IGHV1-45A0A0A0MS14 117 aa9.93□□□□□ -0.82
COPB1-207ENST00000529866 TRBV5-4A0A0C4DH59 114 aa9.93□□□□□ -0.82
COPB1-207ENST00000529866 HYKKA2RU49 373 aa9.93□□□□□ -0.82
COPB1-207ENST00000529866 FAM221AA4D161 298 aa9.93□□□□□ -0.82
COPB1-207ENST00000529866 FOXO6A8MYZ6 492 aa9.93□□□□□ -0.82
COPB1-207ENST00000529866 HACD1B0YJ81 288 aa9.93□□□□□ -0.82
COPB1-207ENST00000529866 IDSB3KWA1 339 aa9.93□□□□□ -0.82
COPB1-207ENST00000529866 RASGRF2O14827 1237 aa9.93□□□□□ -0.82
COPB1-207ENST00000529866 TTI1O43156 1089 aa9.93□□□□□ -0.82
COPB1-207ENST00000529866 ERVK-10P10266 1014 aa9.93□□□□□ -0.82
COPB1-207ENST00000529866 ABOP16442 354 aa9.93□□□□□ -0.82
COPB1-207ENST00000529866 PTMSP20962 102 aa9.93□□□□□ -0.82
COPB1-207ENST00000529866 GRIA3P42263 894 aa9.93□□□□□ -0.82
COPB1-207ENST00000529866 MAGEA1P43355 309 aa9.93□□□□□ -0.82
COPB1-207ENST00000529866 VSX2P58304 361 aaPredicted RBP9.93□□□□□ -0.82
COPB1-207ENST00000529866 PPP2R2AP63151 447 aa9.93□□□□□ -0.82
COPB1-207ENST00000529866 PMP22Q01453 160 aa9.93□□□□□ -0.82
COPB1-207ENST00000529866 ALDH6A1Q02252 535 aaKnown RBP9.93□□□□□ -0.82
COPB1-207ENST00000529866 SRSF11Q05519 484 aaKnown RBP9.93□□□□□ -0.82
COPB1-207ENST00000529866 ZNF33BQ06732 778 aa9.93□□□□□ -0.82
COPB1-207ENST00000529866 PRPSAP1Q14558 356 aa9.93□□□□□ -0.82
COPB1-207ENST00000529866 BRD3Q15059 726 aa9.93□□□□□ -0.82
COPB1-207ENST00000529866 CDSNQ15517 529 aa9.93□□□□□ -0.82
COPB1-207ENST00000529866 SF1Q15637 639 aaKnown RBP9.93□□□□□ -0.82
COPB1-207ENST00000529866 MUM1Q2TAK8 710 aa9.93□□□□□ -0.82
COPB1-207ENST00000529866 WASHC2DQ5SRD0 308 aa9.93□□□□□ -0.82
COPB1-207ENST00000529866 AADACL2Q6P093 401 aa9.93□□□□□ -0.82
COPB1-207ENST00000529866 FIGLAQ6QHK4 219 aa9.93□□□□□ -0.82
COPB1-207ENST00000529866 RANBP10Q6VN20 620 aa9.93□□□□□ -0.82
COPB1-207ENST00000529866 ARHGEF18Q6ZSZ5 1173 aa9.93□□□□□ -0.82
COPB1-207ENST00000529866 NEK10Q6ZWH5 1172 aa9.93□□□□□ -0.82
COPB1-207ENST00000529866 CNGA4Q8IV77 575 aa9.93□□□□□ -0.82
COPB1-207ENST00000529866 KATNAL2Q8IYT4 538 aa9.93□□□□□ -0.82
COPB1-207ENST00000529866 ZUFSPQ96AP4 578 aa9.93□□□□□ -0.82
COPB1-207ENST00000529866 PPP1R2P1Q96PQ5 205 aa9.93□□□□□ -0.82
COPB1-207ENST00000529866 FAM118BQ9BPY3 351 aa9.93□□□□□ -0.82
COPB1-207ENST00000529866 APOL2Q9BQE5 337 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms