RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 DLG3Q92796 817 aa31.73■■■□□ 2.67
SSSCA1-205ENST00000527920 ABHD17AQ96GS6 310 aa31.73■■■□□ 2.67
SSSCA1-205ENST00000527920 ZNF285Q96NJ3 590 aa31.73■■■□□ 2.67
SSSCA1-205ENST00000527920 MKRN2OSH3BPM6 223 aa31.72■■■□□ 2.67
SSSCA1-205ENST00000527920 GFYI3L273 518 aa31.72■■■□□ 2.67
SSSCA1-205ENST00000527920 TTI1O43156 1089 aa31.72■■■□□ 2.67
SSSCA1-205ENST00000527920 CTSBP07858 339 aa31.72■■■□□ 2.67
SSSCA1-205ENST00000527920 ARSFP54793 590 aa31.72■■■□□ 2.67
SSSCA1-205ENST00000527920 DCDP81605 110 aaKnown RBP31.72■■■□□ 2.67
SSSCA1-205ENST00000527920 TCTE1Q5JU00 501 aa31.72■■■□□ 2.67
SSSCA1-205ENST00000527920 YOD1Q5VVQ6 348 aaPredicted RBP31.72■■■□□ 2.67
SSSCA1-205ENST00000527920 LRRC8EQ6NSJ5 796 aa31.72■■■□□ 2.67
SSSCA1-205ENST00000527920 CERS2Q96G23 380 aa31.72■■■□□ 2.67
SSSCA1-205ENST00000527920 SNF8Q96H20 258 aa31.72■■■□□ 2.67
SSSCA1-205ENST00000527920 PLAC1Q9HBJ0 212 aa31.72■■■□□ 2.67
SSSCA1-205ENST00000527920 TXLNGQ9NUQ3 528 aa31.72■■■□□ 2.67
SSSCA1-205ENST00000527920 IRAK4Q9NWZ3 460 aa31.72■■■□□ 2.67
SSSCA1-205ENST00000527920 J3QKU1 62 aa31.71■■■□□ 2.67
SSSCA1-205ENST00000527920 NDC80O14777 642 aa31.71■■■□□ 2.67
SSSCA1-205ENST00000527920 SUV39H1O43463 412 aa31.71■■■□□ 2.67
SSSCA1-205ENST00000527920 SLC28A2O43868 658 aa31.71■■■□□ 2.67
SSSCA1-205ENST00000527920 PSMB5P28074 263 aa31.71■■■□□ 2.67
SSSCA1-205ENST00000527920 SKIV2L2P42285 1042 aaKnown RBP31.71■■■□□ 2.67
SSSCA1-205ENST00000527920 CUL1Q13616 776 aa31.71■■■□□ 2.67
SSSCA1-205ENST00000527920 FRG1Q14331 258 aaKnown RBP31.71■■■□□ 2.67
SSSCA1-205ENST00000527920 HIF1AQ16665 826 aa31.71■■■□□ 2.67
SSSCA1-205ENST00000527920 UGT3A1Q6NUS8 523 aa31.71■■■□□ 2.67
SSSCA1-205ENST00000527920 CYHR1Q6ZMK1 362 aa31.71■■■□□ 2.67
SSSCA1-205ENST00000527920 MIPEPQ99797 713 aa31.71■■■□□ 2.67
SSSCA1-205ENST00000527920 TRIM51Q9BSJ1 452 aa31.71■■■□□ 2.67
SSSCA1-205ENST00000527920 ITGA8P53708 1063 aa31.7■■■□□ 2.67
SSSCA1-205ENST00000527920 ARL4CP56559 192 aa31.7■■■□□ 2.67
SSSCA1-205ENST00000527920 FASTKQ14296 549 aaKnown RBP31.7■■■□□ 2.67
SSSCA1-205ENST00000527920 STEAP4Q687X5 459 aa31.7■■■□□ 2.67
SSSCA1-205ENST00000527920 PKP4Q99569 1192 aa31.7■■■□□ 2.67
SSSCA1-205ENST00000527920 ANKMY1Q9P2S6 941 aa31.7■■■□□ 2.67
SSSCA1-205ENST00000527920 DHCR7Q9UBM7 475 aaKnown RBP31.7■■■□□ 2.67
SSSCA1-205ENST00000527920 ZC3H7BQ9UGR2 993 aaKnown RBP31.7■■■□□ 2.67
SSSCA1-205ENST00000527920 TRMT6Q9UJA5 497 aaKnown RBP31.7■■■□□ 2.67
SSSCA1-205ENST00000527920 TEX264Q9Y6I9 313 aa31.7■■■□□ 2.67
SSSCA1-205ENST00000527920 TP73O15350 636 aa31.69■■■□□ 2.66
SSSCA1-205ENST00000527920 SRPX2O60687 465 aaPredicted RBP31.69■■■□□ 2.66
SSSCA1-205ENST00000527920 GABRB3P28472 473 aa31.69■■■□□ 2.66
SSSCA1-205ENST00000527920 CMPK1P30085 196 aa31.69■■■□□ 2.66
SSSCA1-205ENST00000527920 ELK3P41970 407 aa31.69■■■□□ 2.66
SSSCA1-205ENST00000527920 CBLBQ13191 982 aa31.69■■■□□ 2.66
SSSCA1-205ENST00000527920 LACTB2Q53H82 288 aaPredicted RBP31.69■■■□□ 2.66
SSSCA1-205ENST00000527920 TCTN3Q6NUS6 607 aa31.69■■■□□ 2.66
SSSCA1-205ENST00000527920 PRICKLE2Q7Z3G6 844 aa31.69■■■□□ 2.66
SSSCA1-205ENST00000527920 SELENOSQ9BQE4 189 aa31.69■■■□□ 2.66
SSSCA1-205ENST00000527920 TAS2R13Q9NYV9 303 aa31.69■■■□□ 2.66
SSSCA1-205ENST00000527920 OR2A25A4D2G3 310 aa31.68■■■□□ 2.66
SSSCA1-205ENST00000527920 FITM1A5D6W6 292 aa31.68■■■□□ 2.66
SSSCA1-205ENST00000527920 ZBTB14O43829 449 aa31.68■■■□□ 2.66
SSSCA1-205ENST00000527920 CTSVO60911 334 aa31.68■■■□□ 2.66
SSSCA1-205ENST00000527920 KLF7O75840 302 aaPredicted RBP31.68■■■□□ 2.66
SSSCA1-205ENST00000527920 SLC16A8O95907 504 aa31.68■■■□□ 2.66
SSSCA1-205ENST00000527920 PNLIPRP1P54315 467 aa31.68■■■□□ 2.66
SSSCA1-205ENST00000527920 NFKB2Q00653 900 aa31.68■■■□□ 2.66
SSSCA1-205ENST00000527920 GRM7Q14831 915 aa31.68■■■□□ 2.66
SSSCA1-205ENST00000527920 NKAIN1Q4KMZ8 207 aa31.68■■■□□ 2.66
SSSCA1-205ENST00000527920 C1orf189Q5VU69 101 aa31.68■■■□□ 2.66
SSSCA1-205ENST00000527920 ATG14Q6ZNE5 492 aa31.68■■■□□ 2.66
SSSCA1-205ENST00000527920 RNF44Q7L0R7 432 aa31.68■■■□□ 2.66
SSSCA1-205ENST00000527920 CPNE9Q8IYJ1 553 aa31.68■■■□□ 2.66
SSSCA1-205ENST00000527920 WDR83Q9BRX9 315 aaKnown RBP31.68■■■□□ 2.66
SSSCA1-205ENST00000527920 CORO1CQ9ULV4 474 aaPredicted RBP31.68■■■□□ 2.66
SSSCA1-205ENST00000527920 CHMP2BQ9UQN3 213 aa31.68■■■□□ 2.66
SSSCA1-205ENST00000527920 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP31.68■■■□□ 2.66
SSSCA1-205ENST00000527920 A0A1B0GX78 115 aa31.67■■■□□ 2.66
SSSCA1-205ENST00000527920 EFCAB8A8MWE9 144 aa31.67■■■□□ 2.66
SSSCA1-205ENST00000527920 ONECUT2O95948 504 aa31.67■■■□□ 2.66
SSSCA1-205ENST00000527920 RPA3P35244 121 aaPredicted RBP31.67■■■□□ 2.66
SSSCA1-205ENST00000527920 TIAL1Q01085 375 aaKnown RBP eCLIP31.67■■■□□ 2.66
SSSCA1-205ENST00000527920 ZNF480Q8WV37 535 aa31.67■■■□□ 2.66
SSSCA1-205ENST00000527920 KRT12Q99456 494 aa31.67■■■□□ 2.66
SSSCA1-205ENST00000527920 IFT80Q9P2H3 777 aaPredicted RBP31.67■■■□□ 2.66
SSSCA1-205ENST00000527920 GPN3Q9UHW5 284 aaPredicted RBP31.67■■■□□ 2.66
SSSCA1-205ENST00000527920 TLK1Q9UKI8 766 aa31.67■■■□□ 2.66
SSSCA1-205ENST00000527920 CCNDBP1O95273 360 aa31.66■■■□□ 2.66
SSSCA1-205ENST00000527920 AHSGP02765 367 aa31.66■■■□□ 2.66
SSSCA1-205ENST00000527920 RGS4P49798 205 aa31.66■■■□□ 2.66
SSSCA1-205ENST00000527920 TEDDM1Q5T9Z0 273 aa31.66■■■□□ 2.66
SSSCA1-205ENST00000527920 MRPL14Q6P1L8 145 aaKnown RBP31.66■■■□□ 2.66
SSSCA1-205ENST00000527920 PWWP2AQ96N64 755 aa31.66■■■□□ 2.66
SSSCA1-205ENST00000527920 NDNQ99608 321 aa31.66■■■□□ 2.66
SSSCA1-205ENST00000527920 DPH7Q9BTV6 452 aa31.66■■■□□ 2.66
SSSCA1-205ENST00000527920 ANAPC2Q9UJX6 822 aa31.66■■■□□ 2.66
SSSCA1-205ENST00000527920 FER1L5A0AVI2 2057 aa31.66■■■□□ 2.66
SSSCA1-205ENST00000527920 E7ENX8 843 aa31.65■■■□□ 2.66
SSSCA1-205ENST00000527920 E7ESA3 106 aa31.65■■■□□ 2.66
SSSCA1-205ENST00000527920 CARSP49589 748 aaKnown RBP31.65■■■□□ 2.66
SSSCA1-205ENST00000527920 TAP2Q03519 686 aa31.65■■■□□ 2.66
SSSCA1-205ENST00000527920 PRDX1Q06830 199 aaKnown RBP31.65■■■□□ 2.66
SSSCA1-205ENST00000527920 PIWIL4Q7Z3Z4 852 aaKnown RBP31.65■■■□□ 2.66
SSSCA1-205ENST00000527920 RAB43Q86YS6 212 aa31.65■■■□□ 2.66
SSSCA1-205ENST00000527920 TTC29Q8NA56 475 aaPredicted RBP31.65■■■□□ 2.66
SSSCA1-205ENST00000527920 BBOF1Q8ND07 529 aa31.65■■■□□ 2.66
SSSCA1-205ENST00000527920 FKBP10Q96AY3 582 aa31.65■■■□□ 2.66
SSSCA1-205ENST00000527920 CFAP36Q96G28 342 aa31.65■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms