RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 RFPL1O75677 317 aa12.46□□□□□ -0.41
SMPD1-202ENST00000526280 KLHL2O95198 593 aa12.46□□□□□ -0.41
SMPD1-202ENST00000526280 GUCA1CO95843 209 aa12.46□□□□□ -0.41
SMPD1-202ENST00000526280 FOLR1P15328 257 aa12.46□□□□□ -0.41
SMPD1-202ENST00000526280 PSMB5P28074 263 aa12.46□□□□□ -0.41
SMPD1-202ENST00000526280 RBMS1P29558 406 aaKnown RBP12.46□□□□□ -0.41
SMPD1-202ENST00000526280 ARL4DP49703 201 aa12.46□□□□□ -0.41
SMPD1-202ENST00000526280 MAPK10P53779 464 aa12.46□□□□□ -0.41
SMPD1-202ENST00000526280 SH3BP2P78314 561 aa12.46□□□□□ -0.41
SMPD1-202ENST00000526280 IRF9Q00978 393 aa12.46□□□□□ -0.41
SMPD1-202ENST00000526280 CYP4F3Q08477 520 aa12.46□□□□□ -0.41
SMPD1-202ENST00000526280 RASA2Q15283 850 aa12.46□□□□□ -0.41
SMPD1-202ENST00000526280 OR4D1Q15615 310 aa12.46□□□□□ -0.41
SMPD1-202ENST00000526280 ZIC1Q15915 447 aa12.46□□□□□ -0.41
SMPD1-202ENST00000526280 FAM83EQ2M2I3 478 aa12.46□□□□□ -0.41
SMPD1-202ENST00000526280 ZXDCQ2QGD7 858 aaPredicted RBP12.46□□□□□ -0.41
SMPD1-202ENST00000526280 KIAA1614Q5VZ46 1190 aa12.46□□□□□ -0.41
SMPD1-202ENST00000526280 AGTRAPQ6RW13 159 aa12.46□□□□□ -0.41
SMPD1-202ENST00000526280 FAM129CQ86XR2 697 aa12.46□□□□□ -0.41
SMPD1-202ENST00000526280 FAM20CQ8IXL6 584 aa12.46□□□□□ -0.41
SMPD1-202ENST00000526280 OR2L3Q8NG85 312 aa12.46□□□□□ -0.41
SMPD1-202ENST00000526280 KCTD4Q8WVF5 259 aa12.46□□□□□ -0.41
SMPD1-202ENST00000526280 ATL1Q8WXF7 558 aa12.46□□□□□ -0.41
SMPD1-202ENST00000526280 FBXL8Q96CD0 374 aa12.46□□□□□ -0.41
SMPD1-202ENST00000526280 GPR78Q96P69 363 aa12.46□□□□□ -0.41
SMPD1-202ENST00000526280 TAAR9Q96RI9 348 aa12.46□□□□□ -0.41
SMPD1-202ENST00000526280 B3GNT4Q9C0J1 378 aa12.46□□□□□ -0.41
SMPD1-202ENST00000526280 CHRNA10Q9GZZ6 450 aa12.46□□□□□ -0.41
SMPD1-202ENST00000526280 KLHL25Q9H0H3 589 aa12.46□□□□□ -0.41
SMPD1-202ENST00000526280 ATG10Q9H0Y0 220 aa12.46□□□□□ -0.41
SMPD1-202ENST00000526280 VPS11Q9H270 941 aa12.46□□□□□ -0.41
SMPD1-202ENST00000526280 ASCL3Q9NQ33 180 aa12.46□□□□□ -0.41
SMPD1-202ENST00000526280 SLC39A1Q9NY26 324 aa12.46□□□□□ -0.41
SMPD1-202ENST00000526280 DKK4Q9UBT3 224 aa12.46□□□□□ -0.41
SMPD1-202ENST00000526280 EPG5Q9HCE0 2579 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 CCDC189A1A4V9 331 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 CDRT15L2A8MXV6 281 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 H3BQF6 201 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 POLR3GO15318 223 aaPredicted RBP12.45□□□□□ -0.42
SMPD1-202ENST00000526280 NVLO15381 856 aaKnown RBP12.45□□□□□ -0.42
SMPD1-202ENST00000526280 MAP3K7O43318 606 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 PRAMEF10O60809 474 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 CAPNS1P04632 268 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 ANXA5P08758 320 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 EBLN1P0CF75 366 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 COL6A2P12110 1019 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 TFEBP19484 476 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 RPA3P35244 121 aaPredicted RBP12.45□□□□□ -0.42
SMPD1-202ENST00000526280 KCNC1P48547 511 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 ERVPABLB-1P60509 514 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 NAE1Q13564 534 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 TSTA3Q13630 321 aaPredicted RBP12.45□□□□□ -0.42
SMPD1-202ENST00000526280 KCNAB1Q14722 419 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 ACAP2Q15057 778 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 TERF2Q15554 542 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 TGFBIQ15582 683 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 CDKL4Q5MAI5 379 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 TMTC4Q5T4D3 741 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 FRA10AC1Q70Z53 315 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 GPSM1Q86YR5 675 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 PLD6Q8N2A8 252 aaKnown RBP12.45□□□□□ -0.42
SMPD1-202ENST00000526280 C19orf47Q8N9M1 422 aaKnown RBP12.45□□□□□ -0.42
SMPD1-202ENST00000526280 OR56A3Q8NH54 315 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 OR2W6PQ8NHA6 318 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 STAG3L4Q8TBR4 150 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 EPS8L3Q8TE67 593 aaKnown RBP12.45□□□□□ -0.42
SMPD1-202ENST00000526280 MZB1Q8WU39 189 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 USP7Q93009 1102 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 ZUFSPQ96AP4 578 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 TCTN2Q96GX1 697 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 OR6C1Q96RD1 312 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 MIPEPQ99797 713 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 ACAT2Q9BWD1 397 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 SGPP1Q9BX95 441 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 PCBD2Q9H0N5 130 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 ALG9Q9H6U8 611 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 PDE7BQ9NP56 450 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 SOHLH2Q9NX45 425 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 EURLQ9NYK6 297 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 TBK1Q9UHD2 729 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 PCDHGA7Q9Y5G6 932 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 PCDHGA3Q9Y5H0 932 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 KLK4Q9Y5K2 254 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 FRYQ5TBA9 3013 aa12.45□□□□□ -0.42
SMPD1-202ENST00000526280 FREM2Q5SZK8 3169 aa12.44□□□□□ -0.42
SMPD1-202ENST00000526280 C1QTNF9BB2RNN3 333 aa12.44□□□□□ -0.42
SMPD1-202ENST00000526280 TARM1B6A8C7 271 aa12.44□□□□□ -0.42
SMPD1-202ENST00000526280 C9orf172C9J069 976 aa12.44□□□□□ -0.42
SMPD1-202ENST00000526280 POLR1CO15160 346 aaPredicted RBP12.44□□□□□ -0.42
SMPD1-202ENST00000526280 CDH16O75309 829 aa12.44□□□□□ -0.42
SMPD1-202ENST00000526280 MSL3P1P0C860 447 aa12.44□□□□□ -0.42
SMPD1-202ENST00000526280 C1QTNF9P0C862 333 aa12.44□□□□□ -0.42
SMPD1-202ENST00000526280 MAGP20916 626 aa12.44□□□□□ -0.42
SMPD1-202ENST00000526280 CCND1P24385 295 aa12.44□□□□□ -0.42
SMPD1-202ENST00000526280 CMPK1P30085 196 aa12.44□□□□□ -0.42
SMPD1-202ENST00000526280 GRIA3P42263 894 aa12.44□□□□□ -0.42
SMPD1-202ENST00000526280 SLCO1A2P46721 670 aa12.44□□□□□ -0.42
SMPD1-202ENST00000526280 HNMTP50135 292 aa12.44□□□□□ -0.42
SMPD1-202ENST00000526280 RAB15P59190 212 aa12.44□□□□□ -0.42
SMPD1-202ENST00000526280 TBPL1P62380 186 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms