RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 OR4N4Q8N0Y3 316 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 SHISA5Q8N114 240 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 METTL27Q8N6F8 245 aaPredicted RBP4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 C19orf47Q8N9M1 422 aaKnown RBP4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 SNX31Q8N9S9 440 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 AGBL5Q8NDL9 886 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 ZNF740Q8NDX6 193 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 OR2L3Q8NG85 312 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 OR2A1Q8NGT9 310 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 OR1L3Q8NH93 324 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 WDR36Q8NI36 951 aaKnown RBP4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 MAGEC3Q8TD91 643 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 MZB1Q8WU39 189 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 KLHL6Q8WZ60 621 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 SMPDL3AQ92484 453 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 GATA6Q92908 595 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 KIAA1191Q96A73 305 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 PHF21BQ96EK2 531 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 LIN37Q96GY3 246 aaPredicted RBP4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 PDLIM5Q96HC4 596 aaKnown RBP4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 HIST1H2AHQ96KK5 128 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 UBXN10Q96LJ8 280 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 CCDC138Q96M89 665 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 PRAP1Q96NZ9 151 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 NSUN5Q96P11 429 aaKnown RBP4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 GPR78Q96P69 363 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 DCBLD2Q96PD2 775 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 ZIM3Q96PE6 472 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 OR4K3Q96R72 315 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 ATOH8Q96SQ7 321 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 RUFY1Q96T51 708 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 CMKLR1Q99788 373 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 HIST1H2AJQ99878 128 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 CCDC77Q9BR77 488 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 H2AFJQ9BTM1 129 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 TMEM121BQ9BXQ6 578 aaPredicted RBP4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 TRIM54Q9BYV2 358 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 DERL2Q9GZP9 239 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 SPNS1Q9H2V7 528 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 ZNF768Q9H5H4 540 aaKnown RBP4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 AKIRIN1Q9H9L7 192 aaPredicted RBP4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 POLR1BQ9H9Y6 1135 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 NMRAL1Q9HBL8 299 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 POPDC3Q9HBV1 291 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 MRPS30Q9NP92 439 aaKnown RBP4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 CCDC177Q9NQR7 707 aaPredicted RBP4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 INTS7Q9NVH2 962 aaKnown RBP4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 IRAK4Q9NWZ3 460 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 SIDT1Q9NXL6 827 aaKnown RBP4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 WWOXQ9NZC7 414 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 OR6C2Q9NZP2 312 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 SPATA7Q9P0W8 599 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 KLHL42Q9P2K6 505 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 XPR1Q9UBH6 696 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 EPHA6Q9UF33 1036 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 LNPEPQ9UIQ6 1025 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 ZNF180Q9UJW8 692 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 SLC22A14Q9Y267 594 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 MSRB2Q9Y3D2 182 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 NEUROG3Q9Y4Z2 214 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 OARD1Q9Y530 152 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 B3GALT1Q9Y5Z6 326 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 ASCC3Q8N3C0 2202 aaKnown RBP4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 PI4KAP42356 2102 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 GVINP1Q7Z2Y8 2422 aa4.43□□□□□ -1.7
CHMP4A-202ENST00000524955 IQANK1A0A1B0GTG1 560 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 FAM221BA6H8Z2 402 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 E7EQ34 232 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 PPP6CO00743 305 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 FFAR3O14843 346 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 CLGNO14967 610 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 POLR1CO15160 346 aaPredicted RBP4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 SLC16A5O15375 505 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 GPR42O15529 346 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 LCMT2O60294 686 aaKnown RBP4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 KDM1AO60341 852 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 PRAMEF4O60810 478 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 KERAO60938 352 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 KATNA1O75449 491 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 KIAA0754O94854 1291 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 KLHL2O95198 593 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 MED26O95402 600 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 ZBTB11O95625 1053 aaPredicted RBP4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 S100BP04271 92 aaPredicted RBP4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 SERPIND1P05546 499 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 ANXA5P08758 320 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 ERGP11308 486 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 CDK4P11802 303 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 MTHFD2P13995 350 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 GFAPP14136 432 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 KRT4P19013 534 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 ITPKBP27987 946 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 RBMS1P29558 406 aaKnown RBP4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 EEF1DP29692 281 aaKnown RBP4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 CMPK1P30085 196 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 EIF2S3P41091 472 aaKnown RBP4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 HNF4AP41235 474 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 MAGEA12P43365 314 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 CCR10P46092 362 aa4.42□□□□□ -1.7
CHMP4A-202ENST00000524955 GABRA4P48169 554 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms