RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 P2RY2P41231 377 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 CLCNKAP51800 687 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 GFPT1Q06210 699 aaPredicted RBP1.57□□□□□ -2.16
CD44-212ENST00000524922 PDGFRLQ15198 375 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 CDC37Q16543 378 aaPredicted RBP1.57□□□□□ -2.16
CD44-212ENST00000524922 ZNF876PQ49A33 203 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 SPOUT1Q5T280 376 aaKnown RBP1.57□□□□□ -2.16
CD44-212ENST00000524922 CCNYL2Q5T2Q4 361 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 SYCP2LQ5T4T6 812 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 ZNF280DQ6N043 979 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 TRNP1Q6NT89 227 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 SEPT14Q6ZU15 432 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 LPCAT2Q7L5N7 544 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 TRMT11Q7Z4G4 463 aaKnown RBP1.57□□□□□ -2.16
CD44-212ENST00000524922 FAM228AQ86W67 206 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 KMT5CQ86Y97 462 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 CCDC146Q8IYE0 955 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 HACE1Q8IYU2 909 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 ZNF248Q8NDW4 579 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 BEST2Q8NFU1 509 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 CADM4Q8NFZ8 388 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 ZNF461Q8TAF7 563 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 MAGEC3Q8TD91 643 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 FGF11Q92914 225 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 OTULINQ96BN8 352 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 RHBDF1Q96CC6 855 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 ERLEC1Q96DZ1 483 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 ELP4Q96EB1 424 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 DYNLL2Q96FJ2 89 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 GAD1Q99259 594 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 LZTS2Q9BRK4 669 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 PYGO2Q9BRQ0 406 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 LRRC1Q9BTT6 524 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 BARHL1Q9BZE3 327 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 ARRDC1-AS1Q9H2J1 176 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 LMAN1LQ9HAT1 526 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 PLCB1Q9NQ66 1216 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 TBC1D22BQ9NU19 505 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 AGPAT5Q9NUQ2 364 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 TBC1D13Q9NVG8 400 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 TMEM181Q9P2C4 612 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 ZNF624Q9P2J8 865 aaPredicted RBP1.57□□□□□ -2.16
CD44-212ENST00000524922 MTRRQ9UBK8 725 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 HSPB7Q9UBY9 170 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 ANAPC2Q9UJX6 822 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 KLK13Q9UKR3 277 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 PADI1Q9ULC6 663 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 TBX20Q9UMR3 447 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 STX8Q9UNK0 236 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 PA2G4Q9UQ80 394 aaKnown RBP1.57□□□□□ -2.16
CD44-212ENST00000524922 EXOC6BQ9Y2D4 811 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 OR2W1Q9Y3N9 320 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 UBIAD1Q9Y5Z9 338 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 KIAA1217Q5T5P2 1943 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 PLXND1Q9Y4D7 1925 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 POLEQ07864 2286 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 TTC41PQ6P2S7 1318 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 CSPG4Q6UVK1 2322 aa1.57□□□□□ -2.16
CD44-212ENST00000524922 CABIN1Q9Y6J0 2220 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 MYH8P13535 1937 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 PCDH15Q96QU1 1955 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 GSTTP1A0A1W2PQM5 241 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 TYW5A2RUC4 315 aaKnown RBP1.56□□□□□ -2.16
CD44-212ENST00000524922 TSPY2A6NKD2 308 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 PALM2-AKAP2B1ALY0 433 aaPredicted RBP1.56□□□□□ -2.16
CD44-212ENST00000524922 C10orf142B7Z368 130 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 SPECC1L-ADORA2AF8WAN1 911 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 K7ENP7 123 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 GPAA1O43292 621 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 TRAPPC3O43617 180 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 DKC1O60832 514 aaKnown RBP eCLIP1.56□□□□□ -2.16
CD44-212ENST00000524922 ATP9AO75110 1047 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 INHBAP08476 426 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 GNSP15586 552 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 GNB3P16520 340 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 CD58P19256 250 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 CD82P27701 267 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 ADSSP30520 456 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 SFNP31947 248 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 NUDT1P36639 197 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 GRK6P43250 576 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 TDO2P48775 406 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 SLC11A1P49279 550 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 FMO5P49326 533 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 AARSP49588 968 aaKnown RBP eCLIP1.56□□□□□ -2.16
CD44-212ENST00000524922 HARS2P49590 506 aaKnown RBP1.56□□□□□ -2.16
CD44-212ENST00000524922 GPC3P51654 580 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 ATXN3P54252 364 aaPredicted RBP1.56□□□□□ -2.16
CD44-212ENST00000524922 HDAC4P56524 1084 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 ISL1P61371 349 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 RPL24P83731 157 aaKnown RBP1.56□□□□□ -2.16
CD44-212ENST00000524922 TFAP4Q01664 338 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 POU5F1Q01860 360 aaKnown RBP1.56□□□□□ -2.16
CD44-212ENST00000524922 GOLGA8FQ08AF8 430 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 IKQ13123 557 aaPredicted RBP1.56□□□□□ -2.16
CD44-212ENST00000524922 EIF3IQ13347 325 aaKnown RBP1.56□□□□□ -2.16
CD44-212ENST00000524922 SF3A2Q15428 464 aaKnown RBP1.56□□□□□ -2.16
CD44-212ENST00000524922 QRICH1Q2TAL8 776 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 ITPRIPL2Q3MIP1 535 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 WDR38Q5JTN6 314 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms