RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 FAM156AQ8NDB6 213 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 ADPRHL1Q8NDY3 354 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 TMEM104Q8NE00 496 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 OR2L5Q8NG80 312 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 FIBINQ8TAL6 211 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 EDAQ92838 391 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 FBXW5Q969U6 566 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 TMBIM1Q969X1 311 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 FAM162AQ96A26 154 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 ACSF2Q96CM8 615 aaPredicted RBP7.35□□□□□ -1.23
HDAC3-216ENST00000523088 ANAPC16Q96DE5 110 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 C18orf8Q96DM3 657 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 DUS3LQ96G46 650 aaKnown RBP7.35□□□□□ -1.23
HDAC3-216ENST00000523088 CHAMP1Q96JM3 812 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 FOPNLQ96NB1 174 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 PHF12Q96QT6 1004 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 DHRS4Q9BTZ2 278 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 THUMPD3Q9BV44 507 aaKnown RBP7.35□□□□□ -1.23
HDAC3-216ENST00000523088 WWP1Q9H0M0 922 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 S1PR5Q9H228 398 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 FZD8Q9H461 694 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 ETNK1Q9HBU6 452 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 MRPL47Q9HD33 250 aaKnown RBP7.35□□□□□ -1.23
HDAC3-216ENST00000523088 CD320Q9NPF0 282 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 NRIP3Q9NQ35 241 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 ING3Q9NXR8 418 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 HCSTQ9UBK5 93 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 DAPK2Q9UIK4 370 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 APPL1Q9UKG1 709 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 HYOU1Q9Y4L1 999 aa7.35□□□□□ -1.23
HDAC3-216ENST00000523088 PDCD11Q14690 1871 aaKnown RBP7.34□□□□□ -1.23
HDAC3-216ENST00000523088 PIEZO1Q92508 2521 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 A0A0A0MRY4 1105 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 LINC00862A6NCI5 91 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 ARHGAP42A6NI28 874 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 RFPL4AA6NLU0 287 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 ZNF716A6NP11 495 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 EFCAB7A8K855 629 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 KCNU1A8MYU2 1149 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 KPNA7A9QM74 516 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 RFPL4AL1F8VTS6 287 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 ACKR2O00590 384 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 NRP1O14786 923 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 SMAD7O15105 426 aaKnown RBP7.34□□□□□ -1.23
HDAC3-216ENST00000523088 LDLRAD4O15165 306 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 TCAPO15273 167 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 MSI1O43347 362 aaKnown RBP7.34□□□□□ -1.23
HDAC3-216ENST00000523088 KCNAB3O43448 404 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 ASNA1O43681 348 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 CLPXO76031 633 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 GLUD1P00367 558 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 IFNA10P01566 189 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 LTFP02788 710 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 HOXD4P09016 255 aaPredicted RBP7.34□□□□□ -1.23
HDAC3-216ENST00000523088 ZNF735P0CB33 412 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 CKMT1AP12532 417 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 HNF1AP20823 631 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 IMPDH1P20839 514 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 KLRC2P26717 231 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 PSMB6P28072 239 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 MSX2P35548 267 aaPredicted RBP7.34□□□□□ -1.23
HDAC3-216ENST00000523088 PBX3P40426 434 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 OMPP47874 163 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 LIMS1P48059 325 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 VEGFCP49767 419 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 ENTPD1P49961 510 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 SEC24CP53992 1094 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 ZNF91Q05481 1191 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 SIGLEC14Q08ET2 396 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 RASGEF1BQ0VAM2 473 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 MERTKQ12866 999 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 GAGE1Q13065 139 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 PRKAA1Q13131 559 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 TUSC3Q13454 348 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 KRR1Q13601 381 aaKnown RBP7.34□□□□□ -1.23
HDAC3-216ENST00000523088 COL9A2Q14055 689 aaPredicted RBP7.34□□□□□ -1.23
HDAC3-216ENST00000523088 TRAM2Q15035 370 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 ZNHIT3Q15649 155 aaPredicted RBP7.34□□□□□ -1.23
HDAC3-216ENST00000523088 ZNF174Q15697 407 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 TIGD6Q17RP2 521 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.34□□□□□ -1.23
HDAC3-216ENST00000523088 ARMCX4Q5H9R4 360 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 ARL6IP4Q66PJ3 421 aaKnown RBP7.34□□□□□ -1.23
HDAC3-216ENST00000523088 ATG16L1Q676U5 607 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 HEPHL1Q6MZM0 1159 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 PMF1Q6P1K2 205 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 POTEGQ6S5H5 508 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 RNF19BQ6ZMZ0 732 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 USP45Q70EL2 814 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 ERMP1Q7Z2K6 904 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 SNX20Q7Z614 316 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 TFAP2DQ7Z6R9 452 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 METTL23Q86XA0 190 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 TUSC5Q8IXB3 177 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 CENPLQ8N0S6 344 aaPredicted RBP7.34□□□□□ -1.23
HDAC3-216ENST00000523088 AHI1Q8N157 1196 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 KYQ8NBH2 561 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 SMG8Q8ND04 991 aaKnown RBP7.34□□□□□ -1.23
HDAC3-216ENST00000523088 RCBTB1Q8NDN9 531 aa7.34□□□□□ -1.23
HDAC3-216ENST00000523088 VN1R2Q8NFZ6 395 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms