RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 PFKLP17858 780 aa10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 PRPH2P23942 346 aa10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 CTSCP53634 463 aa10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 SF1Q15637 639 aaKnown RBP10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 ZBED5Q49AG3 693 aa10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 TMEM259Q4ZIN3 620 aa10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 HENMT1Q5T8I9 393 aaKnown RBP10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 NOXRED1Q6NXP6 359 aa10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 ELMSAN1Q6PJG2 1045 aa10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 TMEM179BQ7Z7N9 219 aa10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 ZDHHC13Q8IUH4 622 aa10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 RASGRP3Q8IV61 690 aa10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 LEMD2Q8NC56 503 aa10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 ITCHQ96J02 903 aa10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 ZSWIM3Q96MP5 696 aa10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 C5orf42Q9H799 3197 aa10.45□□□□□ -0.74
RAB11FIP1-204ENST00000522774 CARNS1A5YM72 827 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 C16orf96A6NNT2 1141 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 SLC16A5O15375 505 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 TSPAN6O43657 245 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 JUPP14923 745 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 PREPP48147 710 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 AP1S2P56377 157 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 ZNF77Q15935 545 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 TMEM132CQ8N3T6 1108 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 OR7A2PQ8NGA2 310 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 TESCQ96BS2 214 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 ISOC1Q96CN7 298 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 HHIPQ96QV1 700 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 MBOAT4Q96T53 435 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 SAGE1Q9NXZ1 904 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 IFT80Q9P2H3 777 aaPredicted RBP10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 MTCL1Q9Y4B5 1905 aaKnown RBP10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 CFAP99D6REC4 459 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 E7EQ34 232 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 RETP07949 1114 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 CYP2A6P11509 494 aaPredicted RBP10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 POLR2EP19388 210 aaKnown RBP10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 POLR2IP36954 125 aaKnown RBP10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 PIGAP37287 484 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 EPHA5P54756 1037 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 IRF8Q02556 426 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 DDX39BQ13838 428 aaKnown RBP10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 CCNYL2Q5T2Q4 361 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 ADNP2Q6IQ32 1131 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 DOK6Q6PKX4 331 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 SPESP1Q6UW49 350 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 KCTD8Q6ZWB6 473 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 GPR180Q86V85 440 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 ERI1Q8IV48 349 aaKnown RBP10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 DDHD1Q8NEL9 900 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 OR52E4Q8NGH9 312 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 ASZ1Q8WWH4 475 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 FBXL8Q96CD0 374 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 PAWRQ96IZ0 340 aaKnown RBP10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 MTERF1Q99551 399 aaKnown RBP10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 AMBRA1Q9C0C7 1298 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 RMND5AQ9H871 391 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 POLR1BQ9H9Y6 1135 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 ERVK-11Q9UQG0 969 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 ITM2BQ9Y287 266 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 KIAA0100Q14667 2235 aaKnown RBP10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 A0A1W2PQ67 120 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 TMX2-CTNND1H3BSU7 103 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 RFXANKO14593 260 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 PER2O15055 1255 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 SLCO2B1O94956 709 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 GSTM1P09488 218 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 CDK4P11802 303 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 PRKACGP22612 351 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 BDKRB1P46663 353 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 DCDC1P59894 354 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 ESRRGP62508 458 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 GSTM4Q03013 218 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 RAB39AQ14964 217 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 UGT8Q16880 541 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 CES5AQ6NT32 575 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 THOC6Q86W42 341 aaKnown RBP10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 RAVER1Q8IY67 606 aaKnown RBP10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 RASGEF1AQ8N9B8 481 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 SGCDQ92629 289 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 OSBPL10Q9BXB5 764 aa10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 REXO4Q9GZR2 422 aaKnown RBP10.44□□□□□ -0.74
RAB11FIP1-204ENST00000522774 NPIPB8E9PQR5 432 aa10.43□□□□□ -0.74
RAB11FIP1-204ENST00000522774 GNGT2O14610 69 aa10.43□□□□□ -0.74
RAB11FIP1-204ENST00000522774 EFCAB14O75071 495 aa10.43□□□□□ -0.74
RAB11FIP1-204ENST00000522774 SH3BGRLO75368 114 aa10.43□□□□□ -0.74
RAB11FIP1-204ENST00000522774 FTH1P02794 183 aa10.43□□□□□ -0.74
RAB11FIP1-204ENST00000522774 IL7RP16871 459 aa10.43□□□□□ -0.74
RAB11FIP1-204ENST00000522774 MAPK1P28482 360 aa10.43□□□□□ -0.74
RAB11FIP1-204ENST00000522774 HLCSP50747 726 aa10.43□□□□□ -0.74
RAB11FIP1-204ENST00000522774 PPP2R2BQ00005 443 aa10.43□□□□□ -0.74
RAB11FIP1-204ENST00000522774 NAE1Q13564 534 aa10.43□□□□□ -0.74
RAB11FIP1-204ENST00000522774 CBX2Q14781 532 aaPredicted RBP10.43□□□□□ -0.74
RAB11FIP1-204ENST00000522774 XKR6Q5GH73 641 aa10.43□□□□□ -0.74
RAB11FIP1-204ENST00000522774 NEK10Q6ZWH5 1172 aa10.43□□□□□ -0.74
RAB11FIP1-204ENST00000522774 KIAA0907Q7Z7F0 614 aaPredicted RBP10.43□□□□□ -0.74
RAB11FIP1-204ENST00000522774 TRAM1L1Q8N609 369 aa10.43□□□□□ -0.74
RAB11FIP1-204ENST00000522774 DNAJB8Q8NHS0 232 aa10.43□□□□□ -0.74
RAB11FIP1-204ENST00000522774 ING5Q8WYH8 240 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms