RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 CD86P42081 329 aa8.43□□□□□ -1.06
TRAPPC9-212ENST00000521944 NSG1P42857 185 aa8.43□□□□□ -1.06
TRAPPC9-212ENST00000521944 NSFP46459 744 aaKnown RBP8.43□□□□□ -1.06
TRAPPC9-212ENST00000521944 NR0B1P51843 470 aaKnown RBP8.43□□□□□ -1.06
TRAPPC9-212ENST00000521944 MAMLD1Q13495 774 aa8.43□□□□□ -1.06
TRAPPC9-212ENST00000521944 GTF2H3Q13889 308 aa8.43□□□□□ -1.06
TRAPPC9-212ENST00000521944 DPYSL2Q16555 572 aa8.43□□□□□ -1.06
TRAPPC9-212ENST00000521944 ZNF658BQ4V348 819 aaPredicted RBP8.43□□□□□ -1.06
TRAPPC9-212ENST00000521944 TFDP3Q5H9I0 405 aa8.43□□□□□ -1.06
TRAPPC9-212ENST00000521944 EMC4Q5J8M3 183 aa8.43□□□□□ -1.06
TRAPPC9-212ENST00000521944 FNBP1LQ5T0N5 605 aa8.43□□□□□ -1.06
TRAPPC9-212ENST00000521944 SPINK14Q6IE38 97 aa8.43□□□□□ -1.06
TRAPPC9-212ENST00000521944 NEK10Q6ZWH5 1172 aa8.43□□□□□ -1.06
TRAPPC9-212ENST00000521944 AMIGO1Q86WK6 493 aa8.43□□□□□ -1.06
TRAPPC9-212ENST00000521944 PSTKQ8IV42 348 aaKnown RBP8.43□□□□□ -1.06
TRAPPC9-212ENST00000521944 GHDCQ8N2G8 530 aa8.43□□□□□ -1.06
TRAPPC9-212ENST00000521944 CNTD1Q8N815 330 aa8.43□□□□□ -1.06
TRAPPC9-212ENST00000521944 DDHD1Q8NEL9 900 aa8.43□□□□□ -1.06
TRAPPC9-212ENST00000521944 OR2L2Q8NH16 312 aa8.43□□□□□ -1.06
TRAPPC9-212ENST00000521944 GDAP1Q8TB36 358 aa8.43□□□□□ -1.06
TRAPPC9-212ENST00000521944 STT3BQ8TCJ2 826 aa8.43□□□□□ -1.06
TRAPPC9-212ENST00000521944 NSMCE1Q8WV22 266 aa8.43□□□□□ -1.06
TRAPPC9-212ENST00000521944 N4BP2L2Q92802 583 aaPredicted RBP8.43□□□□□ -1.06
TRAPPC9-212ENST00000521944 SEC16BQ96JE7 1060 aa8.43□□□□□ -1.06
TRAPPC9-212ENST00000521944 NPAS2Q99743 824 aa8.43□□□□□ -1.06
TRAPPC9-212ENST00000521944 CRB3Q9BUF7 120 aa8.43□□□□□ -1.06
TRAPPC9-212ENST00000521944 KLHL1Q9NR64 748 aa8.43□□□□□ -1.06
TRAPPC9-212ENST00000521944 FANCLQ9NW38 375 aa8.43□□□□□ -1.06
TRAPPC9-212ENST00000521944 EURLQ9NYK6 297 aa8.43□□□□□ -1.06
TRAPPC9-212ENST00000521944 FAM8A1Q9UBU6 413 aa8.43□□□□□ -1.06
TRAPPC9-212ENST00000521944 TRPS1Q9UHF7 1281 aa8.43□□□□□ -1.06
TRAPPC9-212ENST00000521944 C3orf18Q9UK00 162 aa8.43□□□□□ -1.06
TRAPPC9-212ENST00000521944 PLCL2Q9UPR0 1127 aa8.43□□□□□ -1.06
TRAPPC9-212ENST00000521944 ICKQ9UPZ9 632 aa8.43□□□□□ -1.06
TRAPPC9-212ENST00000521944 KLHL20Q9Y2M5 609 aa8.43□□□□□ -1.06
TRAPPC9-212ENST00000521944 MAU2Q9Y6X3 613 aa8.43□□□□□ -1.06
TRAPPC9-212ENST00000521944 MGAM2Q2M2H8 2515 aa8.43□□□□□ -1.06
TRAPPC9-212ENST00000521944 A6NHS1 94 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 SOWAHDA6NJG2 315 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 FAM229AH3BQW9 127 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 MAP2K7O14733 419 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 DSCR3O14972 297 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 EPHB6O15197 1021 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 CRLF1O75462 422 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 ZGLP1P0C6A0 271 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 PSMA2P25787 234 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 PEBP1P30086 187 aaKnown RBP8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 CD96P40200 585 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 JAM2P57087 298 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 NKX6-1P78426 367 aaPredicted RBP8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 GALNT2Q10471 571 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 PRKG2Q13237 762 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 TUBA3CQ13748 450 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 BECN1Q14457 450 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 GPRC6AQ5T6X5 926 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 TUBA3EQ6PEY2 450 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 DCUN1D2Q6PH85 259 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 NAPRTQ6XQN6 538 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 UNC5AQ6ZN44 842 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 DET1Q7L5Y6 550 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 CD163Q86VB7 1156 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 CXorf67Q86X51 503 aaPredicted RBP8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 LIX1LQ8IVB5 337 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 MCATQ8IVS2 390 aaKnown RBP8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 SUN3Q8TAQ9 357 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 FAM57AQ8TBR7 257 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 RND1Q92730 232 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 CCDC34Q96HJ3 373 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 IMMP1LQ96LU5 166 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 TTC25Q96NG3 672 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 FERD3LQ96RJ6 166 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 GANQ9H2C0 597 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 OR52A5Q9H2C5 316 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 NDST4Q9H3R1 872 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 CLSTN2Q9H4D0 955 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 PLEKHF2Q9H8W4 249 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 ZWILCHQ9H900 591 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 RAD18Q9NS91 495 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 CUTCQ9NTM9 273 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 SEPT11Q9NVA2 429 aaKnown RBP8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 ANKRD10Q9NXR5 420 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 CRIM1Q9NZV1 1036 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 NXT1Q9UKK6 140 aaKnown RBP8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 TTLL3Q9Y4R7 772 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 ABCA1O95477 2261 aa8.42□□□□□ -1.06
TRAPPC9-212ENST00000521944 IGLV3-12A0A075B6K2 115 aa8.41□□□□□ -1.06
TRAPPC9-212ENST00000521944 A0A1B0GTH9 108 aa8.41□□□□□ -1.06
TRAPPC9-212ENST00000521944 TMEM191CA6NGB0 347 aa8.41□□□□□ -1.06
TRAPPC9-212ENST00000521944 A6NNC1 897 aa8.41□□□□□ -1.06
TRAPPC9-212ENST00000521944 H3BRJ5 948 aa8.41□□□□□ -1.06
TRAPPC9-212ENST00000521944 TTI1O43156 1089 aa8.41□□□□□ -1.06
TRAPPC9-212ENST00000521944 SLC35G4P0C7Q5 338 aa8.41□□□□□ -1.06
TRAPPC9-212ENST00000521944 CD53P19397 219 aa8.41□□□□□ -1.06
TRAPPC9-212ENST00000521944 PDHA2P29803 388 aa8.41□□□□□ -1.06
TRAPPC9-212ENST00000521944 KLK7P49862 253 aa8.41□□□□□ -1.06
TRAPPC9-212ENST00000521944 ZNF165P49910 485 aa8.41□□□□□ -1.06
TRAPPC9-212ENST00000521944 ZNF135P52742 658 aaPredicted RBP8.41□□□□□ -1.06
TRAPPC9-212ENST00000521944 NUP107P57740 925 aa8.41□□□□□ -1.06
TRAPPC9-212ENST00000521944 EEF1A2Q05639 463 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms