RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 PRR23CQ6ZRP0 262 aa21.46■■□□□ 1.03
PTP4A3-204ENST00000521578 GPSM1Q86YR5 675 aa21.46■■□□□ 1.03
PTP4A3-204ENST00000521578 CPNE9Q8IYJ1 553 aa21.46■■□□□ 1.03
PTP4A3-204ENST00000521578 ZNF548Q8NEK5 533 aaPredicted RBP21.46■■□□□ 1.03
PTP4A3-204ENST00000521578 LKAAEAR1Q8TD35 194 aa21.46■■□□□ 1.03
PTP4A3-204ENST00000521578 C3orf30Q96M34 536 aa21.46■■□□□ 1.03
PTP4A3-204ENST00000521578 EDEM2Q9BV94 578 aa21.46■■□□□ 1.03
PTP4A3-204ENST00000521578 NMRK1Q9NWW6 199 aa21.46■■□□□ 1.03
PTP4A3-204ENST00000521578 FAM186AA6NE01 2351 aa21.46■■□□□ 1.03
PTP4A3-204ENST00000521578 ZNF292O60281 2723 aa21.46■■□□□ 1.03
PTP4A3-204ENST00000521578 SORBS2O94875 1100 aaKnown RBP21.46■■□□□ 1.03
PTP4A3-204ENST00000521578 TRIM16O95361 564 aa21.46■■□□□ 1.03
PTP4A3-204ENST00000521578 DGKAP23743 735 aa21.46■■□□□ 1.03
PTP4A3-204ENST00000521578 ACADVLP49748 655 aa21.46■■□□□ 1.03
PTP4A3-204ENST00000521578 CDC16Q13042 620 aa21.46■■□□□ 1.03
PTP4A3-204ENST00000521578 ART3Q13508 389 aa21.46■■□□□ 1.03
PTP4A3-204ENST00000521578 FASTKQ14296 549 aaKnown RBP21.46■■□□□ 1.03
PTP4A3-204ENST00000521578 SLC30A9Q6PML9 568 aa21.46■■□□□ 1.03
PTP4A3-204ENST00000521578 AMZ2Q86W34 360 aa21.46■■□□□ 1.03
PTP4A3-204ENST00000521578 GATAD2AQ86YP4 633 aa21.46■■□□□ 1.03
PTP4A3-204ENST00000521578 TWIST2Q8WVJ9 160 aa21.46■■□□□ 1.03
PTP4A3-204ENST00000521578 NAF1Q96HR8 494 aaKnown RBP21.46■■□□□ 1.03
PTP4A3-204ENST00000521578 AQP9O43315 295 aa21.45■■□□□ 1.02
PTP4A3-204ENST00000521578 MLYCDO95822 493 aa21.45■■□□□ 1.02
PTP4A3-204ENST00000521578 EPHA8P29322 1005 aaPredicted RBP21.45■■□□□ 1.02
PTP4A3-204ENST00000521578 CCT8P50990 548 aa21.45■■□□□ 1.02
PTP4A3-204ENST00000521578 IRX1P78414 480 aaPredicted RBP21.45■■□□□ 1.02
PTP4A3-204ENST00000521578 ILF3Q12906 894 aaKnown RBP eCLIP21.45■■□□□ 1.02
PTP4A3-204ENST00000521578 ELOCQ15369 112 aa21.45■■□□□ 1.02
PTP4A3-204ENST00000521578 AASDHQ4L235 1098 aaPredicted RBP21.45■■□□□ 1.02
PTP4A3-204ENST00000521578 PIGGQ5H8A4 983 aa21.45■■□□□ 1.02
PTP4A3-204ENST00000521578 TAF8Q7Z7C8 310 aa21.45■■□□□ 1.02
PTP4A3-204ENST00000521578 NRROSQ86YC3 692 aa21.45■■□□□ 1.02
PTP4A3-204ENST00000521578 DNAJC9Q8WXX5 260 aa21.45■■□□□ 1.02
PTP4A3-204ENST00000521578 CCM2Q9BSQ5 444 aa21.45■■□□□ 1.02
PTP4A3-204ENST00000521578 MRPL1Q9BYD6 325 aaKnown RBP21.45■■□□□ 1.02
PTP4A3-204ENST00000521578 OSGEPL1Q9H4B0 414 aa21.45■■□□□ 1.02
PTP4A3-204ENST00000521578 AKTIPQ9H8T0 292 aa21.45■■□□□ 1.02
PTP4A3-204ENST00000521578 WDR41Q9HAD4 459 aa21.45■■□□□ 1.02
PTP4A3-204ENST00000521578 NUDT4Q9NZJ9 180 aa21.45■■□□□ 1.02
PTP4A3-204ENST00000521578 PCTPQ9UKL6 214 aa21.45■■□□□ 1.02
PTP4A3-204ENST00000521578 ZFC3H1O60293 1989 aaKnown RBP21.45■■□□□ 1.02
PTP4A3-204ENST00000521578 VPS4BO75351 444 aa21.44■■□□□ 1.02
PTP4A3-204ENST00000521578 FTH1P02794 183 aa21.44■■□□□ 1.02
PTP4A3-204ENST00000521578 ATP6V1C1P21283 382 aa21.44■■□□□ 1.02
PTP4A3-204ENST00000521578 ACTR1BP42025 376 aa21.44■■□□□ 1.02
PTP4A3-204ENST00000521578 FOXA1P55317 472 aa21.44■■□□□ 1.02
PTP4A3-204ENST00000521578 ACTR1AP61163 376 aa21.44■■□□□ 1.02
PTP4A3-204ENST00000521578 LRP8Q14114 963 aa21.44■■□□□ 1.02
PTP4A3-204ENST00000521578 GK5Q6ZS86 529 aa21.44■■□□□ 1.02
PTP4A3-204ENST00000521578 SLC25A45Q8N413 288 aa21.44■■□□□ 1.02
PTP4A3-204ENST00000521578 GPBAR1Q8TDU6 330 aa21.44■■□□□ 1.02
PTP4A3-204ENST00000521578 LINC00615Q96LM1 132 aaPredicted RBP21.44■■□□□ 1.02
PTP4A3-204ENST00000521578 CDRT15Q96T59 188 aa21.44■■□□□ 1.02
PTP4A3-204ENST00000521578 TIMM29Q9BSF4 260 aa21.44■■□□□ 1.02
PTP4A3-204ENST00000521578 SARS2Q9NP81 518 aaKnown RBP21.44■■□□□ 1.02
PTP4A3-204ENST00000521578 GULP1Q9UBP9 304 aa21.44■■□□□ 1.02
PTP4A3-204ENST00000521578 DNMT3AQ9Y6K1 912 aaPredicted RBP21.44■■□□□ 1.02
PTP4A3-204ENST00000521578 GVINP1Q7Z2Y8 2422 aa21.44■■□□□ 1.02
PTP4A3-204ENST00000521578 CDX4O14627 284 aaPredicted RBP21.43■■□□□ 1.02
PTP4A3-204ENST00000521578 PIP5K1BO14986 540 aa21.43■■□□□ 1.02
PTP4A3-204ENST00000521578 ACADSP16219 412 aa21.43■■□□□ 1.02
PTP4A3-204ENST00000521578 NFE2L1Q14494 772 aa21.43■■□□□ 1.02
PTP4A3-204ENST00000521578 AGKQ53H12 422 aa21.43■■□□□ 1.02
PTP4A3-204ENST00000521578 EFL1Q7Z2Z2 1120 aaKnown RBP21.43■■□□□ 1.02
PTP4A3-204ENST00000521578 LILRA3Q8N6C8 439 aaPredicted RBP21.43■■□□□ 1.02
PTP4A3-204ENST00000521578 EFCAB3Q8N7B9 438 aa21.43■■□□□ 1.02
PTP4A3-204ENST00000521578 PPFIBP2Q8ND30 876 aa21.43■■□□□ 1.02
PTP4A3-204ENST00000521578 SAP25Q8TEE9 199 aa21.43■■□□□ 1.02
PTP4A3-204ENST00000521578 ELMO1Q92556 727 aa21.43■■□□□ 1.02
PTP4A3-204ENST00000521578 CCDC124Q96CT7 223 aaKnown RBP21.43■■□□□ 1.02
PTP4A3-204ENST00000521578 GSDMCQ9BYG8 508 aa21.43■■□□□ 1.02
PTP4A3-204ENST00000521578 TUBB1Q9H4B7 451 aa21.43■■□□□ 1.02
PTP4A3-204ENST00000521578 DOLKQ9UPQ8 538 aa21.43■■□□□ 1.02
PTP4A3-204ENST00000521578 ARHGEF17Q96PE2 2063 aaPredicted RBP21.43■■□□□ 1.02
PTP4A3-204ENST00000521578 PTPRZ1P23471 2315 aaPredicted RBP21.43■■□□□ 1.02
PTP4A3-204ENST00000521578 MGAT4DA6NG13 374 aa21.43■■□□□ 1.02
PTP4A3-204ENST00000521578 KPNA5O15131 536 aa21.43■■□□□ 1.02
PTP4A3-204ENST00000521578 YKT6O15498 198 aa21.43■■□□□ 1.02
PTP4A3-204ENST00000521578 FFAR2O15552 330 aa21.43■■□□□ 1.02
PTP4A3-204ENST00000521578 GDF9O60383 454 aa21.43■■□□□ 1.02
PTP4A3-204ENST00000521578 SNX2O60749 519 aa21.43■■□□□ 1.02
PTP4A3-204ENST00000521578 ESRRBO95718 433 aa21.43■■□□□ 1.02
PTP4A3-204ENST00000521578 VCLP18206 1134 aa21.43■■□□□ 1.02
PTP4A3-204ENST00000521578 BOP1Q14137 746 aaKnown RBP21.43■■□□□ 1.02
PTP4A3-204ENST00000521578 TGFBIQ15582 683 aa21.43■■□□□ 1.02
PTP4A3-204ENST00000521578 MUM1Q2TAK8 710 aa21.43■■□□□ 1.02
PTP4A3-204ENST00000521578 TTLL9Q3SXZ7 439 aa21.43■■□□□ 1.02
PTP4A3-204ENST00000521578 TCHHL1Q5QJ38 904 aaPredicted RBP21.43■■□□□ 1.02
PTP4A3-204ENST00000521578 FAM83HQ6ZRV2 1179 aaPredicted RBP21.43■■□□□ 1.02
PTP4A3-204ENST00000521578 CFAP206Q8IYR0 622 aa21.43■■□□□ 1.02
PTP4A3-204ENST00000521578 OR2L2Q8NH16 312 aa21.43■■□□□ 1.02
PTP4A3-204ENST00000521578 NPAS2Q99743 824 aa21.43■■□□□ 1.02
PTP4A3-204ENST00000521578 SLC25A23Q9BV35 468 aa21.43■■□□□ 1.02
PTP4A3-204ENST00000521578 SEMA4BQ9NPR2 832 aaPredicted RBP21.43■■□□□ 1.02
PTP4A3-204ENST00000521578 TMEM9BQ9NQ34 198 aa21.43■■□□□ 1.02
PTP4A3-204ENST00000521578 SPATS2LQ9NUQ6 558 aaKnown RBP21.43■■□□□ 1.02
PTP4A3-204ENST00000521578 CD274Q9NZQ7 290 aa21.43■■□□□ 1.02
PTP4A3-204ENST00000521578 KLHL42Q9P2K6 505 aa21.43■■□□□ 1.02
PTP4A3-204ENST00000521578 ATP6AP2A0A1C7CYW4 349 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms