RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 ECHDC3Q96DC8 303 aa4.94□□□□□ -1.62
SDC2-204ENST00000519914 RMND5BQ96G75 393 aaPredicted RBP4.94□□□□□ -1.62
SDC2-204ENST00000519914 IGSF21Q96ID5 467 aa4.94□□□□□ -1.62
SDC2-204ENST00000519914 FCRL1Q96LA6 429 aa4.94□□□□□ -1.62
SDC2-204ENST00000519914 TEX37Q96LM6 180 aa4.94□□□□□ -1.62
SDC2-204ENST00000519914 PRPF18Q99633 342 aaKnown RBP4.94□□□□□ -1.62
SDC2-204ENST00000519914 KCTD14Q9BQ13 255 aaPredicted RBP4.94□□□□□ -1.62
SDC2-204ENST00000519914 SLC39A3Q9BRY0 314 aa4.94□□□□□ -1.62
SDC2-204ENST00000519914 TMEM79Q9BSE2 394 aa4.94□□□□□ -1.62
SDC2-204ENST00000519914 FEM1AQ9BSK4 669 aa4.94□□□□□ -1.62
SDC2-204ENST00000519914 HTATIP2Q9BUP3 242 aa4.94□□□□□ -1.62
SDC2-204ENST00000519914 ADI1Q9BV57 179 aa4.94□□□□□ -1.62
SDC2-204ENST00000519914 SLC29A3Q9BZD2 475 aa4.94□□□□□ -1.62
SDC2-204ENST00000519914 NOL11Q9H8H0 719 aaKnown RBP4.94□□□□□ -1.62
SDC2-204ENST00000519914 NANOGQ9H9S0 305 aa4.94□□□□□ -1.62
SDC2-204ENST00000519914 SEMA4BQ9NPR2 832 aaPredicted RBP4.94□□□□□ -1.62
SDC2-204ENST00000519914 USE1Q9NZ43 259 aa4.94□□□□□ -1.62
SDC2-204ENST00000519914 GALPQ9UBC7 116 aa4.94□□□□□ -1.62
SDC2-204ENST00000519914 GIMAP2Q9UG22 337 aa4.94□□□□□ -1.62
SDC2-204ENST00000519914 GNPTGQ9UJJ9 305 aa4.94□□□□□ -1.62
SDC2-204ENST00000519914 ANAPC2Q9UJX6 822 aa4.94□□□□□ -1.62
SDC2-204ENST00000519914 APPL1Q9UKG1 709 aa4.94□□□□□ -1.62
SDC2-204ENST00000519914 CDH7Q9ULB5 785 aa4.94□□□□□ -1.62
SDC2-204ENST00000519914 FAM50BQ9Y247 325 aa4.94□□□□□ -1.62
SDC2-204ENST00000519914 BTRCQ9Y297 605 aa4.94□□□□□ -1.62
SDC2-204ENST00000519914 MAN2B2Q9Y2E5 1009 aa4.94□□□□□ -1.62
SDC2-204ENST00000519914 CARD8Q9Y2G2 431 aa4.94□□□□□ -1.62
SDC2-204ENST00000519914 YIPF1Q9Y548 306 aa4.94□□□□□ -1.62
SDC2-204ENST00000519914 PTGDR2Q9Y5Y4 395 aa4.94□□□□□ -1.62
SDC2-204ENST00000519914 ACTL7AQ9Y615 435 aa4.94□□□□□ -1.62
SDC2-204ENST00000519914 MRPL42Q9Y6G3 142 aaKnown RBP4.94□□□□□ -1.62
SDC2-204ENST00000519914 AK5Q9Y6K8 562 aa4.94□□□□□ -1.62
SDC2-204ENST00000519914 BPTFQ12830 3046 aa4.94□□□□□ -1.62
SDC2-204ENST00000519914 A0A1W2PQ67 120 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 TMEM247A6NEH6 219 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 TBKBP1A7MCY6 615 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 UPK1AO00322 258 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 PLOD2O00469 737 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 GIPC1O14908 333 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 TAPBPO15533 448 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 SYNCRIPO60506 623 aaKnown RBP4.93□□□□□ -1.62
SDC2-204ENST00000519914 CBFA2T3O75081 653 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 ZNF821O75541 412 aaPredicted RBP4.93□□□□□ -1.62
SDC2-204ENST00000519914 CRCPO75575 148 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 OR4F21O95013 312 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 CSPG5O95196 566 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 CPNE6O95741 557 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 MT-CO1P00395 513 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 MPC1LP0DKB6 136 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 CKMT2P17540 419 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 GGT1P19440 569 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 CHRM3P20309 590 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 ITGALP20701 1170 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 DGKAP23743 735 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 ACRV1P26436 265 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 OXTRP30559 389 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 SLC5A2P31639 672 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 OR1D2P34982 312 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 CAPGP40121 348 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 NRIP1P48552 1158 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 HTR6P50406 440 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 ARPP19P56211 112 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 C21orf58P58505 322 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 RHOAP61586 193 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 YBX1P67809 324 aaKnown RBP4.93□□□□□ -1.62
SDC2-204ENST00000519914 SLC7A9P82251 487 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 ECT2LQ008S8 904 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 GRSF1Q12849 480 aaKnown RBP eCLIP4.93□□□□□ -1.62
SDC2-204ENST00000519914 EPS8Q12929 822 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 NFATC2Q13469 925 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 GTF2H2Q13888 395 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 BOP1Q14137 746 aaKnown RBP4.93□□□□□ -1.62
SDC2-204ENST00000519914 CAPRIN1Q14444 709 aaKnown RBP4.93□□□□□ -1.62
SDC2-204ENST00000519914 RBBP7Q16576 425 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 NRF1Q16656 503 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 GEN1Q17RS7 908 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 ZBED5Q49AG3 693 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 ZRANB3Q5FWF4 1079 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 LRIF1Q5T3J3 769 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 ZDHHC20Q5W0Z9 365 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 GTF2H2CQ6P1K8 395 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 IYDQ6PHW0 289 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 CYP20A1Q6UW02 462 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 PRSS55Q6UWB4 352 aaPredicted RBP4.93□□□□□ -1.62
SDC2-204ENST00000519914 LAYNQ6UX15 382 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 C22orf34Q6ZV56 151 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 HTR3DQ70Z44 454 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 SERPINA9Q86WD7 417 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 CALHM3Q86XJ0 350 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 SPPL2CQ8IUH8 684 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 TCEAL8Q8IYN2 117 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 FAM9CQ8IZT9 166 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 MYO1HQ8N1T3 1032 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 TCAIMQ8N3R3 496 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 CBR4Q8N4T8 237 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 SNX31Q8N9S9 440 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 FNDC5Q8NAU1 212 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 PJA1Q8NG27 643 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 OR4F6Q8NGB9 312 aa4.93□□□□□ -1.62
SDC2-204ENST00000519914 OR52B6Q8NGF0 335 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms