RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 DPP6P42658 865 aa14.05□□□□□ -0.16
CLN8-204ENST00000519254 DHPSP49366 369 aaPredicted RBP14.05□□□□□ -0.16
CLN8-204ENST00000519254 MTTPP55157 894 aa14.05□□□□□ -0.16
CLN8-204ENST00000519254 ACTR3P61158 418 aa14.05□□□□□ -0.16
CLN8-204ENST00000519254 IRX1P78414 480 aaPredicted RBP14.05□□□□□ -0.16
CLN8-204ENST00000519254 LRP8Q14114 963 aa14.05□□□□□ -0.16
CLN8-204ENST00000519254 ZRSR2Q15696 482 aaKnown RBP14.05□□□□□ -0.16
CLN8-204ENST00000519254 ALG11Q2TAA5 492 aa14.05□□□□□ -0.16
CLN8-204ENST00000519254 ZNF542PQ5EBM4 170 aa14.05□□□□□ -0.16
CLN8-204ENST00000519254 REP15Q6BDI9 236 aa14.05□□□□□ -0.16
CLN8-204ENST00000519254 HPS6Q86YV9 775 aa14.05□□□□□ -0.16
CLN8-204ENST00000519254 BRINP2Q9C0B6 783 aa14.05□□□□□ -0.16
CLN8-204ENST00000519254 ATG10Q9H0Y0 220 aa14.05□□□□□ -0.16
CLN8-204ENST00000519254 DUSP15Q9H1R2 295 aaPredicted RBP14.05□□□□□ -0.16
CLN8-204ENST00000519254 TM9SF3Q9HD45 589 aa14.05□□□□□ -0.16
CLN8-204ENST00000519254 FARSBQ9NSD9 589 aaKnown RBP14.05□□□□□ -0.16
CLN8-204ENST00000519254 PRPF19Q9UMS4 504 aaKnown RBP14.05□□□□□ -0.16
CLN8-204ENST00000519254 BDP1A6H8Y1 2624 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 MANBAO00462 879 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 LSM1O15116 133 aaKnown RBP14.04□□□□□ -0.16
CLN8-204ENST00000519254 NRP2O60462 931 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 PRAMEF4O60810 478 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 GPR37L1O60883 481 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 CLDN9O95484 217 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 CATP04040 527 aaKnown RBP14.04□□□□□ -0.16
CLN8-204ENST00000519254 WNT1P04628 370 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 MAP4P27816 1152 aaKnown RBP14.04□□□□□ -0.16
CLN8-204ENST00000519254 BDKRB1P46663 353 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 RACK1P63244 317 aaKnown RBP14.04□□□□□ -0.16
CLN8-204ENST00000519254 PCM1Q15154 2024 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 ATP6AP1LQ52LC2 224 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 WDR45BQ5MNZ6 344 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 C1orf146Q5VVC0 180 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 PRAMEF9Q5VWM5 478 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 SPDYE1Q8NFV5 336 aaPredicted RBP14.04□□□□□ -0.16
CLN8-204ENST00000519254 GAB3Q8WWW8 586 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 SCARF2Q96GP6 870 aaPredicted RBP14.04□□□□□ -0.16
CLN8-204ENST00000519254 SLC45A3Q96JT2 553 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 CDRT15Q96T59 188 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 TIMM29Q9BSF4 260 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 C1orf50Q9BV19 199 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 SLC29A3Q9BZD2 475 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 DCLRE1BQ9H816 532 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 SLC52A3Q9NQ40 469 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 DNAJC11Q9NVH1 559 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 NDE1Q9NXR1 346 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 SLC22A14Q9Y267 594 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 DNMT3AQ9Y6K1 912 aaPredicted RBP14.04□□□□□ -0.16
CLN8-204ENST00000519254 NCOR1O75376 2440 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 KCNE1BA0A087WTH5 132 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 SPTY2D1-AS1A0A0U1RR47 76 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 TNFRSF10CO14798 259 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 KRT36O76013 467 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 PSMG1O95456 288 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 LMNAP02545 664 aaKnown RBP14.04□□□□□ -0.16
CLN8-204ENST00000519254 ITPKAP23677 461 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 MAPK9P45984 424 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 ZFP36L2P47974 494 aaKnown RBP14.04□□□□□ -0.16
CLN8-204ENST00000519254 EMX2Q04743 252 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 GRIK2Q13002 908 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 FZD2Q14332 565 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 RPS6KA2Q15349 733 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 MMEL1Q495T6 779 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 PIGGQ5H8A4 983 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 C6orf163Q5TEZ5 329 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 BNC2Q6ZN30 1099 aaPredicted RBP14.04□□□□□ -0.16
CLN8-204ENST00000519254 TRIM46Q7Z4K8 759 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 L3MBTL4Q8NA19 623 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 MFSD2AQ8NA29 543 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 USP7Q93009 1102 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 TEX37Q96LM6 180 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 CCDC138Q96M89 665 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 FOPNLQ96NB1 174 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 PKP4Q99569 1192 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 TMEM168Q9H0V1 697 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 ACTR8Q9H981 624 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 STOX2Q9P2F5 926 aaPredicted RBP14.04□□□□□ -0.16
CLN8-204ENST00000519254 CIDEBQ9UHD4 219 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 PACSIN3Q9UKS6 424 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 FBXO4Q9UKT5 387 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 PCDHGA7Q9Y5G6 932 aa14.04□□□□□ -0.16
CLN8-204ENST00000519254 THADAQ6YHU6 1953 aa14.03□□□□□ -0.16
CLN8-204ENST00000519254 A0A1W2PR77 199 aa14.03□□□□□ -0.16
CLN8-204ENST00000519254 C9JVG2 144 aa14.03□□□□□ -0.16
CLN8-204ENST00000519254 H0Y3Z8 333 aa14.03□□□□□ -0.16
CLN8-204ENST00000519254 NR5A2O00482 541 aa14.03□□□□□ -0.16
CLN8-204ENST00000519254 MRASO14807 208 aa14.03□□□□□ -0.16
CLN8-204ENST00000519254 CFLARO15519 480 aa14.03□□□□□ -0.16
CLN8-204ENST00000519254 ULK1O75385 1050 aa14.03□□□□□ -0.16
CLN8-204ENST00000519254 C1orf105O95561 183 aa14.03□□□□□ -0.16
CLN8-204ENST00000519254 SLC35G4P0C7Q5 338 aa14.03□□□□□ -0.16
CLN8-204ENST00000519254 CAPN3P20807 821 aa14.03□□□□□ -0.16
CLN8-204ENST00000519254 AK4P27144 223 aaPredicted RBP14.03□□□□□ -0.16
CLN8-204ENST00000519254 AVPR2P30518 371 aa14.03□□□□□ -0.16
CLN8-204ENST00000519254 CLCNKAP51800 687 aa14.03□□□□□ -0.16
CLN8-204ENST00000519254 PLOD1Q02809 727 aaPredicted RBP14.03□□□□□ -0.16
CLN8-204ENST00000519254 EIF2B5Q13144 721 aaKnown RBP14.03□□□□□ -0.16
CLN8-204ENST00000519254 NR6A1Q15406 480 aa14.03□□□□□ -0.16
CLN8-204ENST00000519254 ZNF423Q2M1K9 1284 aa14.03□□□□□ -0.16
CLN8-204ENST00000519254 GGTA1PQ4G0N0 100 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms