RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 CCDC88CQ9P219 2028 aa-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 PLXNB1O43157 2135 aa-1.34□□□□□ -2.62
RNU6-539P-201ENST00000516665 DOCK9Q9BZ29 2069 aa-1.35□□□□□ -2.62
RNU6-539P-201ENST00000516665 CABIN1Q9Y6J0 2220 aa-1.35□□□□□ -2.63
RNU6-539P-201ENST00000516665 MICAL3Q7RTP6 2002 aa-1.35□□□□□ -2.63
RNU6-539P-201ENST00000516665 SEC16AO15027 2179 aa-1.35□□□□□ -2.63
RNU6-539P-201ENST00000516665 IGHV3-35A0A0C4DH35 117 aa-1.35□□□□□ -2.63
RNU6-539P-201ENST00000516665 RRN3P2A6NIE6 340 aa-1.35□□□□□ -2.63
RNU6-539P-201ENST00000516665 ACSL3O95573 720 aa-1.35□□□□□ -2.63
RNU6-539P-201ENST00000516665 OPRD1P41143 372 aa-1.35□□□□□ -2.63
RNU6-539P-201ENST00000516665 RPS9P46781 194 aaKnown RBP-1.35□□□□□ -2.63
RNU6-539P-201ENST00000516665 GPR143P51810 404 aa-1.35□□□□□ -2.63
RNU6-539P-201ENST00000516665 EIF5P55010 431 aaKnown RBP-1.35□□□□□ -2.63
RNU6-539P-201ENST00000516665 CD81P60033 236 aa-1.35□□□□□ -2.63
RNU6-539P-201ENST00000516665 SORDQ00796 357 aa-1.35□□□□□ -2.63
RNU6-539P-201ENST00000516665 MAD2L1Q13257 205 aaPredicted RBP-1.35□□□□□ -2.63
RNU6-539P-201ENST00000516665 BIRC3Q13489 604 aa-1.35□□□□□ -2.63
RNU6-539P-201ENST00000516665 EDRF1Q3B7T1 1238 aa-1.35□□□□□ -2.63
RNU6-539P-201ENST00000516665 TBRG1Q3YBR2 411 aa-1.35□□□□□ -2.63
RNU6-539P-201ENST00000516665 SMARCD3Q6STE5 483 aa-1.35□□□□□ -2.63
RNU6-539P-201ENST00000516665 QSOX2Q6ZRP7 698 aa-1.35□□□□□ -2.63
RNU6-539P-201ENST00000516665 PM20D2Q8IYS1 436 aa-1.35□□□□□ -2.63
RNU6-539P-201ENST00000516665 TTC5Q8N0Z6 440 aa-1.35□□□□□ -2.63
RNU6-539P-201ENST00000516665 GPR137CQ8N3F9 429 aa-1.35□□□□□ -2.63
RNU6-539P-201ENST00000516665 SLC5A8Q8N695 610 aa-1.35□□□□□ -2.63
RNU6-539P-201ENST00000516665 PTGR2Q8N8N7 351 aaPredicted RBP-1.35□□□□□ -2.63
RNU6-539P-201ENST00000516665 KIAA0895Q8NCT3 520 aa-1.35□□□□□ -2.63
RNU6-539P-201ENST00000516665 OR52P1PQ8NH57 321 aa-1.35□□□□□ -2.63
RNU6-539P-201ENST00000516665 SLC22A18Q96BI1 424 aa-1.35□□□□□ -2.63
RNU6-539P-201ENST00000516665 SLC41A2Q96JW4 573 aa-1.35□□□□□ -2.63
RNU6-539P-201ENST00000516665 SLC22A12Q96S37 553 aa-1.35□□□□□ -2.63
RNU6-539P-201ENST00000516665 FAM110AQ9BQ89 295 aa-1.35□□□□□ -2.63
RNU6-539P-201ENST00000516665 PI4K2AQ9BTU6 479 aa-1.35□□□□□ -2.63
RNU6-539P-201ENST00000516665 LRRC27Q9C0I9 530 aa-1.35□□□□□ -2.63
RNU6-539P-201ENST00000516665 EPS15L1Q9UBC2 864 aa-1.35□□□□□ -2.63
RNU6-539P-201ENST00000516665 ZNF346Q9UL40 294 aaKnown RBP-1.35□□□□□ -2.63
RNU6-539P-201ENST00000516665 L1RE1Q9UN81 338 aa-1.35□□□□□ -2.63
RNU6-539P-201ENST00000516665 ROS1P08922 2347 aa-1.35□□□□□ -2.63
RNU6-539P-201ENST00000516665 RLFQ13129 1914 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 CCT8L1PA6NM43 557 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 DNPH1O43598 174 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 CDK2AP2O75956 126 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 GLP2RO95838 553 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 HCKP08631 526 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 KRTAP2-3P0C7H8 128 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 IRF1P10914 325 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 FGFR2P21802 821 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 HSD3B2P26439 372 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 BLKP51451 505 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 RIDAP52758 137 aaKnown RBP-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 HMGCS2P54868 508 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 EVA1CP58658 441 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 ITKQ08881 620 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 NAE1Q13564 534 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 PRSS8Q16651 343 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 UPP1Q16831 310 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 TRIM60Q495X7 471 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 GALNTL6Q49A17 601 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 DCST2Q5T1A1 773 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 TSPO2Q5TGU0 170 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 SIGIRRQ6IA17 410 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 SYNE3Q6ZMZ3 975 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 ZBTB46Q86UZ6 589 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 CARM1Q86X55 608 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 RPAP2Q8IXW5 612 aaPredicted RBP-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 CPXM2Q8N436 756 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 ZCCHC9Q8N567 271 aaKnown RBP-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 PPP4R1Q8TF05 950 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 KCNE4Q8WWG9 221 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 MTMR8Q96EF0 704 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 TVP23CQ96ET8 276 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 CCT8L2Q96SF2 557 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 NPLQ9BXD5 320 aaPredicted RBP-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 KRTAP2-4Q9BYR9 128 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 KRTAP2-1Q9BYU5 128 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 USP44Q9H0E7 712 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 CPVLQ9H3G5 476 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 BPIFA1Q9NP55 256 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 CA5BQ9Y2D0 317 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 EID1Q9Y6B2 187 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 DGKBQ9Y6T7 804 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 ZSWIM8A7E2V4 1837 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 NAV3Q8IVL0 2385 aa-1.36□□□□□ -2.63
RNU6-539P-201ENST00000516665 IL16Q14005 1332 aa-1.37□□□□□ -2.63
RNU6-539P-201ENST00000516665 SALL1Q9NSC2 1324 aa-1.37□□□□□ -2.63
RNU6-539P-201ENST00000516665 LRP1Q07954 4544 aaKnown RBP-1.37□□□□□ -2.63
RNU6-539P-201ENST00000516665 TRGV8A0A0C4DH27 118 aa-1.37□□□□□ -2.63
RNU6-539P-201ENST00000516665 A0A1W2PRB8 838 aa-1.37□□□□□ -2.63
RNU6-539P-201ENST00000516665 PABPN1LA6NDY0 278 aaKnown RBP-1.37□□□□□ -2.63
RNU6-539P-201ENST00000516665 E9PI62 339 aa-1.37□□□□□ -2.63
RNU6-539P-201ENST00000516665 ZNF749O43361 778 aa-1.37□□□□□ -2.63
RNU6-539P-201ENST00000516665 ECE2O60344 883 aa-1.37□□□□□ -2.63
RNU6-539P-201ENST00000516665 GLRA3O75311 464 aa-1.37□□□□□ -2.63
RNU6-539P-201ENST00000516665 KATNA1O75449 491 aa-1.37□□□□□ -2.63
RNU6-539P-201ENST00000516665 DDHD2O94830 711 aa-1.37□□□□□ -2.63
RNU6-539P-201ENST00000516665 SNUPNO95149 360 aaKnown RBP-1.37□□□□□ -2.63
RNU6-539P-201ENST00000516665 KCNK5O95279 499 aa-1.37□□□□□ -2.63
RNU6-539P-201ENST00000516665 IGHG3P01860 377 aa-1.37□□□□□ -2.63
RNU6-539P-201ENST00000516665 H1F0P07305 194 aaKnown RBP-1.37□□□□□ -2.63
RNU6-539P-201ENST00000516665 HNF1BP35680 557 aa-1.37□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms