RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	SCN1B	Q07699	218 aa		10.87	□□□□□ -0.67
PDCD6-210	ENST00000513582	SMARCB1	Q12824	385 aa		10.87	□□□□□ -0.67
PDCD6-210	ENST00000513582	PRKG2	Q13237	762 aa		10.87	□□□□□ -0.67
PDCD6-210	ENST00000513582	SEMA3A	Q14563	771 aa		10.87	□□□□□ -0.67
PDCD6-210	ENST00000513582	CARD16	Q5EG05	197 aa		10.87	□□□□□ -0.67
PDCD6-210	ENST00000513582	KANK2	Q63ZY3	851 aa		10.87	□□□□□ -0.67
PDCD6-210	ENST00000513582	GPR153	Q6NV75	609 aa		10.87	□□□□□ -0.67
PDCD6-210	ENST00000513582	FAM131A	Q6UXB0	335 aa		10.87	□□□□□ -0.67
PDCD6-210	ENST00000513582	KIAA1324	Q6UXG2	1013 aa	Known RBP	10.87	□□□□□ -0.67
PDCD6-210	ENST00000513582	CCDC71	Q8IV32	467 aa	Predicted RBP	10.87	□□□□□ -0.67
PDCD6-210	ENST00000513582	SLC44A2	Q8IWA5	706 aa	Predicted RBP	10.87	□□□□□ -0.67
PDCD6-210	ENST00000513582	C2CD4A	Q8NCU7	369 aa	Predicted RBP	10.87	□□□□□ -0.67
PDCD6-210	ENST00000513582	SETD6	Q8TBK2	473 aa		10.87	□□□□□ -0.67
PDCD6-210	ENST00000513582	PROKR1	Q8TCW9	393 aa		10.87	□□□□□ -0.67
PDCD6-210	ENST00000513582	MCCC1	Q96RQ3	725 aa	Predicted RBP	10.87	□□□□□ -0.67
PDCD6-210	ENST00000513582	CNPPD1	Q9BV87	410 aa		10.87	□□□□□ -0.67
PDCD6-210	ENST00000513582	SPATA9	Q9BWV2	254 aa		10.87	□□□□□ -0.67
PDCD6-210	ENST00000513582	WASH6P	Q9NQA3	447 aa		10.87	□□□□□ -0.67
PDCD6-210	ENST00000513582	PIGV	Q9NUD9	493 aa		10.87	□□□□□ -0.67
PDCD6-210	ENST00000513582	B3GNT2	Q9NY97	397 aa		10.87	□□□□□ -0.67
PDCD6-210	ENST00000513582	A3GALT2	U3KPV4	340 aa		10.87	□□□□□ -0.67
PDCD6-210	ENST00000513582		H3BM21	787 aa		10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	STS	P08842	583 aa		10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	ITGAM	P11215	1152 aa		10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	SLC19A1	P41440	591 aa		10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	B2M	P61769	119 aa		10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	UBE3A	Q05086	875 aa		10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	MFSD13A	Q14CX5	517 aa		10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	MED22	Q15528	200 aa		10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	PIK3R6	Q5UE93	754 aa		10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	VWA5B2	Q8N398	1253 aa		10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	CLHC1	Q8NHS4	586 aa		10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	VANGL1	Q8TAA9	524 aa	Predicted RBP	10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	SLC35F5	Q8WV83	523 aa		10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	ISG20	Q96AZ6	181 aa	Known RBP	10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	SIPA1	Q96FS4	1042 aa		10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	TTLL2	Q9BWV7	592 aa		10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	RERGL	Q9H628	205 aa		10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	GPR83	Q9NYM4	423 aa		10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	PDP1	Q9P0J1	537 aa	Predicted RBP	10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	UBQLN1	Q9UMX0	589 aa	Known RBP	10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	ANKRD31	Q8N7Z5	1873 aa		10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	OR51F1	A6NGY5	319 aa		10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	TREH	O43280	583 aa		10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	PTH	P01270	115 aa		10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	EVI2B	P34910	448 aa		10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	TALDO1	P37837	337 aa		10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	MXD1	Q05195	221 aa		10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	CAPN13	Q6MZZ7	669 aa	Predicted RBP	10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	FAM171B	Q6P995	826 aa		10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	KLHL17	Q6TDP4	642 aa		10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	CXCL17	Q6UXB2	119 aa		10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	COMMD7	Q86VX2	200 aa		10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	PGBD5	Q8N414	524 aa		10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	OR2T11	Q8NH01	316 aa		10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	L3HYPDH	Q96EM0	354 aa		10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	MAGEB10	Q96LZ2	347 aa	Predicted RBP	10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	TBL1Y	Q9BQ87	522 aa		10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	TTPAL	Q9BTX7	342 aa		10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	FZD8	Q9H461	694 aa		10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	TRIM45	Q9H8W5	580 aa	Predicted RBP	10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	LIN7B	Q9HAP6	207 aa		10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	SP110	Q9HB58	689 aa		10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	MCUB	Q9NWR8	336 aa		10.86	□□□□□ -0.67
PDCD6-210	ENST00000513582	SMIM28	A0A1B0GU29	152 aa		10.85	□□□□□ -0.67
PDCD6-210	ENST00000513582	SUPT3H	B4E1H0	165 aa		10.85	□□□□□ -0.67
PDCD6-210	ENST00000513582	SLC22A5	O76082	557 aa		10.85	□□□□□ -0.67
PDCD6-210	ENST00000513582	MLYCD	O95822	493 aa		10.85	□□□□□ -0.67
PDCD6-210	ENST00000513582	KIR2DL3	P43628	341 aa		10.85	□□□□□ -0.67
PDCD6-210	ENST00000513582	RGS6	P49758	472 aa		10.85	□□□□□ -0.67
PDCD6-210	ENST00000513582	ARHGDIA	P52565	204 aa		10.85	□□□□□ -0.67
PDCD6-210	ENST00000513582	RPP38	P78345	283 aa	Known RBP	10.85	□□□□□ -0.67
PDCD6-210	ENST00000513582	ZNF79	Q15937	498 aa		10.85	□□□□□ -0.67
PDCD6-210	ENST00000513582	TYW3	Q6IPR3	259 aa	Known RBP	10.85	□□□□□ -0.67
PDCD6-210	ENST00000513582	SLC27A1	Q6PCB7	646 aa		10.85	□□□□□ -0.67
PDCD6-210	ENST00000513582	SCAMP5	Q8TAC9	235 aa		10.85	□□□□□ -0.67
PDCD6-210	ENST00000513582	CENPI	Q92674	756 aa	Predicted RBP	10.85	□□□□□ -0.67
PDCD6-210	ENST00000513582	C12orf42	Q96LP6	360 aa		10.85	□□□□□ -0.67
PDCD6-210	ENST00000513582	IL1RAP	Q9NPH3	570 aa		10.85	□□□□□ -0.67
PDCD6-210	ENST00000513582	KRT84	Q9NSB2	600 aa		10.85	□□□□□ -0.67
PDCD6-210	ENST00000513582	SNTG1	Q9NSN8	517 aa		10.85	□□□□□ -0.67
PDCD6-210	ENST00000513582	ING3	Q9NXR8	418 aa		10.85	□□□□□ -0.67
PDCD6-210	ENST00000513582	ALG5	Q9Y673	324 aa		10.85	□□□□□ -0.67
PDCD6-210	ENST00000513582	ELOVL7	A1L3X0	281 aa		10.85	□□□□□ -0.67
PDCD6-210	ENST00000513582	FAM234B	A2RU67	622 aa		10.85	□□□□□ -0.67
PDCD6-210	ENST00000513582	SMIM30	A4D0T7	59 aa		10.85	□□□□□ -0.67
PDCD6-210	ENST00000513582	NT5C1B-RDH14	C9J2C7	533 aa		10.85	□□□□□ -0.67
PDCD6-210	ENST00000513582	TOR1A	O14656	332 aa		10.85	□□□□□ -0.67
PDCD6-210	ENST00000513582	CCR1	P32246	355 aa		10.85	□□□□□ -0.67
PDCD6-210	ENST00000513582	PRIM2	P49643	509 aa		10.85	□□□□□ -0.67
PDCD6-210	ENST00000513582	CLCN7	P51798	805 aa		10.85	□□□□□ -0.67
PDCD6-210	ENST00000513582	AFF1	P51825	1210 aa	Known RBP	10.85	□□□□□ -0.67
PDCD6-210	ENST00000513582	OAZ1	P54368	228 aa		10.85	□□□□□ -0.67
PDCD6-210	ENST00000513582	CXCR4	P61073	352 aa		10.85	□□□□□ -0.67
PDCD6-210	ENST00000513582	MRPL28	Q13084	256 aa	Known RBP	10.85	□□□□□ -0.67
PDCD6-210	ENST00000513582	PTPRCAP	Q14761	206 aa		10.85	□□□□□ -0.67
PDCD6-210	ENST00000513582	IGSF11	Q5DX21	431 aa		10.85	□□□□□ -0.67
PDCD6-210	ENST00000513582	PLET1	Q6UQ28	207 aa		10.85	□□□□□ -0.67
PDCD6-210	ENST00000513582	CFAP77	Q6ZQR2	320 aa		10.85	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms