RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 ATG10Q9H0Y0 220 aa8.12□□□□□ -1.11
RNF4-220ENST00000513578 MUC13Q9H3R2 512 aa8.12□□□□□ -1.11
RNF4-220ENST00000513578 ELOVL6Q9H5J4 265 aa8.12□□□□□ -1.11
RNF4-220ENST00000513578 SPATA6Q9NWH7 488 aaPredicted RBP8.12□□□□□ -1.11
RNF4-220ENST00000513578 SPATA7Q9P0W8 599 aa8.12□□□□□ -1.11
RNF4-220ENST00000513578 MMP17Q9ULZ9 603 aa8.12□□□□□ -1.11
RNF4-220ENST00000513578 MAPRE3Q9UPY8 281 aa8.12□□□□□ -1.11
RNF4-220ENST00000513578 TMEM98Q9Y2Y6 226 aa8.12□□□□□ -1.11
RNF4-220ENST00000513578 L3MBTL1Q9Y468 752 aa8.12□□□□□ -1.11
RNF4-220ENST00000513578 LRRC42Q9Y546 428 aa8.12□□□□□ -1.11
RNF4-220ENST00000513578 PCDHGA11Q9Y5H2 935 aa8.12□□□□□ -1.11
RNF4-220ENST00000513578 KCNE2Q9Y6J6 123 aa8.12□□□□□ -1.11
RNF4-220ENST00000513578 CROCCQ5TZA2 2017 aa8.12□□□□□ -1.11
RNF4-220ENST00000513578 ASPDHA6ND91 283 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 CCDC154A6NI56 674 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 CHURC1-FNTBB4DL54 471 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 FXYD1O00168 92 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 TNFRSF10AO00220 468 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 FOXE1O00358 373 aaPredicted RBP8.11□□□□□ -1.11
RNF4-220ENST00000513578 MAN2B1O00754 1011 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 FFAR3O14843 346 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 GPR42O15529 346 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 DNAJA2O60884 412 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 SEC22BO75396 215 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 PDE5AO76074 875 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 ANP32DO95626 131 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 PAK4O96013 591 aaPredicted RBP8.11□□□□□ -1.11
RNF4-220ENST00000513578 IL6P05231 212 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 CEACAM5P06731 702 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 ANPEPP15144 967 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 NPPBP16860 134 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 CD22P20273 847 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 ITPKAP23677 461 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 VARSP26640 1264 aaKnown RBP8.11□□□□□ -1.11
RNF4-220ENST00000513578 IL12AP29459 219 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 PBLDP30039 288 aaPredicted RBP8.11□□□□□ -1.11
RNF4-220ENST00000513578 IGFALSP35858 605 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 VHLP40337 213 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 HALP42357 657 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 CLCNKAP51800 687 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 CLNS1AP54105 237 aaKnown RBP8.11□□□□□ -1.11
RNF4-220ENST00000513578 EEFSECP57772 596 aaKnown RBP8.11□□□□□ -1.11
RNF4-220ENST00000513578 RPL38P63173 70 aaKnown RBP8.11□□□□□ -1.11
RNF4-220ENST00000513578 TAP2Q03519 686 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 BNIP2Q12982 314 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 CCDC6Q16204 474 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 FXNQ16595 210 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 CPSF6Q16630 551 aaKnown RBP eCLIP8.11□□□□□ -1.11
RNF4-220ENST00000513578 CYP2A13Q16696 494 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 VPS26BQ4G0F5 336 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 XKR6Q5GH73 641 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 PAGE2BQ5JRK9 111 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 SWT1Q5T5J6 900 aaKnown RBP8.11□□□□□ -1.11
RNF4-220ENST00000513578 ATG9BQ674R7 924 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 CRTC3Q6UUV7 619 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 TMEM126BQ8IUX1 230 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 SLC15A3Q8IY34 581 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 LAS2Q8IYD9 372 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 TBC1D21Q8IYX1 336 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 SYNPOQ8N3V7 929 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 OR5K2Q8NHB8 316 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 OR14C36Q8NHC7 312 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 ZUFSPQ96AP4 578 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 PYCR2Q96C36 320 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 C11orf24Q96F05 449 aaPredicted RBP8.11□□□□□ -1.11
RNF4-220ENST00000513578 MRGPRX1Q96LB2 322 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 TEX37Q96LM6 180 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 DCBLD2Q96PD2 775 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 GAS2L1Q99501 681 aaPredicted RBP8.11□□□□□ -1.11
RNF4-220ENST00000513578 ZBTB18Q99592 522 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 HAUS8Q9BT25 410 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 APOOQ9BUR5 198 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 C1orf50Q9BV19 199 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 LGR4Q9BXB1 951 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 ACPTQ9BZG2 426 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 PITHD1Q9GZP4 211 aaPredicted RBP8.11□□□□□ -1.11
RNF4-220ENST00000513578 BTBD1Q9H0C5 482 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 PCBD2Q9H0N5 130 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 UBE2ZQ9H832 354 aaPredicted RBP8.11□□□□□ -1.11
RNF4-220ENST00000513578 SGK2Q9HBY8 427 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 FARSBQ9NSD9 589 aaKnown RBP8.11□□□□□ -1.11
RNF4-220ENST00000513578 SLC23A2Q9UGH3 650 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 LIMD1Q9UGP4 676 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 ZNHIT2Q9UHR6 403 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 AP3M1Q9Y2T2 418 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 DYRK1BQ9Y463 629 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 POLR3HQ9Y535 204 aaPredicted RBP8.11□□□□□ -1.11
RNF4-220ENST00000513578 PCDHA9Q9Y5H5 950 aa8.11□□□□□ -1.11
RNF4-220ENST00000513578 PCYT1BQ9Y5K3 369 aaPredicted RBP8.11□□□□□ -1.11
RNF4-220ENST00000513578 LAMA2P24043 3122 aaKnown RBP8.11□□□□□ -1.11
RNF4-220ENST00000513578 PRORSD1PA6NEY8 169 aa8.1□□□□□ -1.11
RNF4-220ENST00000513578 E7EQ34 232 aa8.1□□□□□ -1.11
RNF4-220ENST00000513578 H3BQ06 376 aaPredicted RBP8.1□□□□□ -1.11
RNF4-220ENST00000513578 CACNB4O00305 520 aaPredicted RBP8.1□□□□□ -1.11
RNF4-220ENST00000513578 CASQ2O14958 399 aaPredicted RBP8.1□□□□□ -1.11
RNF4-220ENST00000513578 MAP3K7O43318 606 aa8.1□□□□□ -1.11
RNF4-220ENST00000513578 APBB3O95704 486 aa8.1□□□□□ -1.11
RNF4-220ENST00000513578 C8BP07358 591 aa8.1□□□□□ -1.11
RNF4-220ENST00000513578 C1GALT1C1LP0DN25 315 aa8.1□□□□□ -1.11
RNF4-220ENST00000513578 SRFP11831 508 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms