RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 VARS2Q5ST30 1063 aaKnown RBP11□□□□□ -0.65
TCOF1-211ENST00000513346 ZNF678Q5SXM1 525 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 PIK3R6Q5UE93 754 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 PDE12Q6L8Q7 609 aaKnown RBP11□□□□□ -0.65
TCOF1-211ENST00000513346 MACC1Q6ZN28 852 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 OR10G2Q8NGC3 310 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 RANBP9Q96S59 729 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 CERS4Q9HA82 394 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 AASSQ9UDR5 926 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 POU2F3Q9UKI9 436 aa11□□□□□ -0.65
TCOF1-211ENST00000513346 RPL36Q9Y3U8 105 aaKnown RBP11□□□□□ -0.65
TCOF1-211ENST00000513346 URB1O60287 2271 aaKnown RBP11□□□□□ -0.65
TCOF1-211ENST00000513346 CCNDBP1O95273 360 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 C1RP00736 705 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 TNNI3P19429 210 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 CORO1AP31146 461 aaKnown RBP10.99□□□□□ -0.65
TCOF1-211ENST00000513346 HSPA7P48741 367 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 RPS3AP61247 264 aaKnown RBP10.99□□□□□ -0.65
TCOF1-211ENST00000513346 CD47Q08722 323 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 SOWAHAQ2M3V2 549 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 CCSAPQ6IQ19 270 aaPredicted RBP10.99□□□□□ -0.65
TCOF1-211ENST00000513346 KDM1BQ8NB78 822 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 OR6K2Q8NGY2 324 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 FAM83DQ9H4H8 585 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 TMPRSS4Q9NRS4 437 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 CMAHPQ9Y471 501 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 C4AP0C0L4 1744 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 C4BP0C0L5 1744 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 NEDD8-MDP1E9PL57 170 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 SGTAO43765 313 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 ADH1CP00326 375 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 OGNP20774 298 aaKnown RBP10.99□□□□□ -0.65
TCOF1-211ENST00000513346 TGFBR2P37173 567 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 RABGGTBP53611 331 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 DIO3P55073 304 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 TEAD4Q15561 434 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 IFI44LQ53G44 452 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 FAM46CQ5VWP2 391 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 DEF8Q6ZN54 512 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 CPNE9Q8IYJ1 553 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 TOR1AIP2Q8NFQ8 470 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 OR4A15Q8NGL6 344 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 RTP4Q96DX8 246 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 TM9SF3Q9HD45 589 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 AGPAT4Q9NRZ5 378 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 TMEM181Q9P2C4 612 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 KCNE2Q9Y6J6 123 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 A0A0G2JPF8 293 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 ANKDD1BA6NHY2 528 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 A8MU76 341 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 MAGEB17A8MXT2 336 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 HNRNPCL3B7ZW38 293 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 KPNA5O15131 536 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 STK16O75716 305 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 IFNW1P05000 195 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 PFKMP08237 780 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 HNRNPCL4P0DMR1 293 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 PRG2P13727 222 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 HTR7P34969 479 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 CHRNA4P43681 627 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 RIPPLY1Q0D2K3 151 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 GRB14Q14449 540 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 TSC22D1Q15714 1073 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 RNASE12Q5GAN4 147 aaKnown RBP10.99□□□□□ -0.65
TCOF1-211ENST00000513346 WDTC1Q8N5D0 677 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 ZNF675Q8TD23 568 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 C11orf84Q9BUA3 381 aaPredicted RBP10.99□□□□□ -0.65
TCOF1-211ENST00000513346 FBXW11Q9UKB1 542 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 PCDHGB6Q9Y5F9 930 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 NRP1O14786 923 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 CLDN9O95484 217 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 SLC35E2BP0CK96 405 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 EPORP19235 508 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 CAPZA2P47755 286 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 LEPRP48357 1165 aaKnown RBP10.99□□□□□ -0.65
TCOF1-211ENST00000513346 GJA9P57773 515 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 AKIRIN2Q53H80 203 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 LYSMD3Q7Z3D4 306 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 TMEM135Q86UB9 458 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 COPS8Q99627 209 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 ATPIF1Q9UII2 106 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 EMCNQ9ULC0 261 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 POFUT2Q9Y2G5 429 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 DHRS7Q9Y394 339 aa10.99□□□□□ -0.65
TCOF1-211ENST00000513346 KERAO60938 352 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 PEPDP12955 493 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 YBEYP58557 167 aaPredicted RBP10.98□□□□□ -0.65
TCOF1-211ENST00000513346 DSC2Q02487 901 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 PAFAH1B3Q15102 231 aaKnown RBP10.98□□□□□ -0.65
TCOF1-211ENST00000513346 COQ5Q5HYK3 327 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 ATAT1Q5SQI0 421 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 AGAP6Q5VW22 663 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 C15orf39Q6ZRI6 1047 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 OR6Q1Q8NGQ2 317 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 NDNFQ8TB73 568 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 UFD1Q92890 307 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 AGAP4Q96P64 663 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 PDCD10Q9BUL8 212 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 SPATA5L1Q9BVQ7 753 aa10.98□□□□□ -0.65
TCOF1-211ENST00000513346 STRA6Q9BX79 667 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms