RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 TRIP13Q15645 432 aaPredicted RBP5.62□□□□□ -1.51
RNF4-217ENST00000511892 KYNUQ16719 465 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 UGT8Q16880 541 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 FAM153CQ494X1 144 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 SYTL3Q4VX76 610 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 C4orf48Q5BLP8 95 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 DNAJC21Q5F1R6 531 aaKnown RBP5.62□□□□□ -1.51
RNF4-217ENST00000511892 TMTC4Q5T4D3 741 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 AGBL2Q5U5Z8 902 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 FAM69BQ5VUD6 431 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 ANKRD22Q5VYY1 191 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 IZUMO3Q5VZ72 239 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 ZNF385CQ66K41 422 aaPredicted RBP5.62□□□□□ -1.51
RNF4-217ENST00000511892 LRRC8BQ6P9F7 803 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 CES3Q6UWW8 571 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 LYPD8Q6UX82 237 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 GSTA5Q7RTV2 222 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 CAND1Q86VP6 1230 aaKnown RBP5.62□□□□□ -1.51
RNF4-217ENST00000511892 FAM20CQ8IXL6 584 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 TBC1D21Q8IYX1 336 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 CNPY4Q8N129 248 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 MPP5Q8N3R9 675 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 LINC01555Q8NAE3 123 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 OR8K5Q8NH50 307 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 FAM76AQ8TAV0 307 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 FBXO25Q8TCJ0 367 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 CPT1BQ92523 772 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 MR1Q95460 341 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.62□□□□□ -1.512e-6■■■■■ 54.9
RNF4-217ENST00000511892 MFSD3Q96ES6 412 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 BIRC8Q96P09 236 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 ZIM3Q96PE6 472 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 TRIM56Q9BRZ2 755 aaKnown RBP5.62□□□□□ -1.51
RNF4-217ENST00000511892 KIFC1Q9BW19 673 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 GPR87Q9BY21 358 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 TRIM55Q9BYV6 548 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 ROPN1BQ9BZX4 212 aaPredicted RBP5.62□□□□□ -1.51
RNF4-217ENST00000511892 TRIM4Q9C037 500 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 IL22Q9GZX6 179 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 CHRNA10Q9GZZ6 450 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 STMN4Q9H169 189 aaPredicted RBP5.62□□□□□ -1.51
RNF4-217ENST00000511892 CHST8Q9H2A9 424 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 PPCSQ9HAB8 311 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 ROPN1Q9HAT0 212 aaPredicted RBP5.62□□□□□ -1.51
RNF4-217ENST00000511892 FANCEQ9HB96 536 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 MRM3Q9HC36 420 aaKnown RBP5.62□□□□□ -1.51
RNF4-217ENST00000511892 SYTL2Q9HCH5 934 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 ZNF71Q9NQZ8 489 aaPredicted RBP5.62□□□□□ -1.51
RNF4-217ENST00000511892 PCMTD2Q9NV79 361 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 OR6C2Q9NZP2 312 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 CIDEBQ9UHD4 219 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 POLG2Q9UHN1 485 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 TLK1Q9UKI8 766 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 POLHQ9Y253 713 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 FARSAQ9Y285 508 aaKnown RBP5.62□□□□□ -1.51
RNF4-217ENST00000511892 ASF1AQ9Y294 204 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 TDRKHQ9Y2W6 561 aaKnown RBP5.62□□□□□ -1.51
RNF4-217ENST00000511892 NEU2Q9Y3R4 380 aa5.62□□□□□ -1.51
RNF4-217ENST00000511892 HEMK1Q9Y5R4 338 aaPredicted RBP5.62□□□□□ -1.51
RNF4-217ENST00000511892 CENPEQ02224 2701 aa5.61□□□□□ -1.51
RNF4-217ENST00000511892 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.61□□□□□ -1.51
RNF4-217ENST00000511892 A0A0J9YY10 115 aa5.61□□□□□ -1.51
RNF4-217ENST00000511892 KRT87PA6NCN2 255 aa5.61□□□□□ -1.51
RNF4-217ENST00000511892 DNALI1O14645 258 aaPredicted RBP5.61□□□□□ -1.51
RNF4-217ENST00000511892 PRMT5O14744 637 aaPredicted RBP5.61□□□□□ -1.51
RNF4-217ENST00000511892 ZNF749O43361 778 aa5.61□□□□□ -1.51
RNF4-217ENST00000511892 PRICKLE3O43900 615 aaPredicted RBP5.61□□□□□ -1.51
RNF4-217ENST00000511892 DNAJB5O75953 348 aa5.61□□□□□ -1.51
RNF4-217ENST00000511892 TMEM63AO94886 807 aa5.61□□□□□ -1.51
RNF4-217ENST00000511892 VAPBO95292 243 aa5.61□□□□□ -1.51
RNF4-217ENST00000511892 WISP1O95388 367 aa5.61□□□□□ -1.51
RNF4-217ENST00000511892 KRT14P02533 472 aa5.61□□□□□ -1.51
RNF4-217ENST00000511892 PDGFAP04085 211 aa5.61□□□□□ -1.51
RNF4-217ENST00000511892 F7P08709 466 aaPredicted RBP5.61□□□□□ -1.51
RNF4-217ENST00000511892 ABHD2P08910 425 aa5.61□□□□□ -1.51
RNF4-217ENST00000511892 RAB40ALP0C0E4 278 aa5.61□□□□□ -1.51
RNF4-217ENST00000511892 CYP2A7P20853 494 aa5.61□□□□□ -1.51
RNF4-217ENST00000511892 RPS3P23396 243 aaKnown RBP eCLIP5.61□□□□□ -1.51
RNF4-217ENST00000511892 IVDP26440 423 aa5.61□□□□□ -1.51
RNF4-217ENST00000511892 PKLRP30613 574 aa5.61□□□□□ -1.51
RNF4-217ENST00000511892 TTPAP49638 278 aa5.61□□□□□ -1.51
RNF4-217ENST00000511892 VPS41P49754 854 aa5.61□□□□□ -1.51
RNF4-217ENST00000511892 RAB28P51157 221 aa5.61□□□□□ -1.51
RNF4-217ENST00000511892 PMS2P54278 862 aa5.61□□□□□ -1.51
RNF4-217ENST00000511892 ITGA1P56199 1179 aa5.61□□□□□ -1.51
RNF4-217ENST00000511892 CDK16Q00536 496 aa5.61□□□□□ -1.51
RNF4-217ENST00000511892 SPTBN1Q01082 2364 aaKnown RBP5.61□□□□□ -1.51
RNF4-217ENST00000511892 GPS1Q13098 491 aa5.61□□□□□ -1.51
RNF4-217ENST00000511892 CBLBQ13191 982 aa5.61□□□□□ -1.51
RNF4-217ENST00000511892 ESPL1Q14674 2120 aa5.61□□□□□ -1.51
RNF4-217ENST00000511892 KIR2DS3Q14952 304 aa5.61□□□□□ -1.51
RNF4-217ENST00000511892 MORF4L2Q15014 288 aa5.61□□□□□ -1.51
RNF4-217ENST00000511892 SLC5A12Q1EHB4 618 aa5.61□□□□□ -1.51
RNF4-217ENST00000511892 TYSND1Q2T9J0 566 aa5.61□□□□□ -1.51
RNF4-217ENST00000511892 DEFB110Q30KQ9 67 aa5.61□□□□□ -1.51
RNF4-217ENST00000511892 PTCHD3Q3KNS1 767 aa5.61□□□□□ -1.51
RNF4-217ENST00000511892 CCSMST1Q4G0I0 132 aa5.61□□□□□ -1.51
RNF4-217ENST00000511892 COLEC12Q5KU26 742 aa5.61□□□□□ -1.51
RNF4-217ENST00000511892 CTSL3PQ5NE16 218 aa5.61□□□□□ -1.51
RNF4-217ENST00000511892 CPZQ66K79 652 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms