RNA–Protein interactions for RNA: ENST00000511663.5

SH3BP2-220, Transcript of SH3 domain binding protein 2, humanhuman

TSL 5

Gene SH3BP2, Length 966 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-220ENST00000511663 CCDC88CQ9P219 2028 aa18.45■□□□□ 0.54
SH3BP2-220ENST00000511663 LRRK2Q5S007 2527 aa18.44■□□□□ 0.54
SH3BP2-220ENST00000511663 H3BMM5 538 aa18.44■□□□□ 0.54
SH3BP2-220ENST00000511663 EIF2S1P05198 315 aaKnown RBP18.44■□□□□ 0.54
SH3BP2-220ENST00000511663 ERVK-10P10266 1014 aa18.44■□□□□ 0.54
SH3BP2-220ENST00000511663 NMBRP28336 390 aa18.44■□□□□ 0.54
SH3BP2-220ENST00000511663 GCGRP47871 477 aa18.44■□□□□ 0.54
SH3BP2-220ENST00000511663 OR1D4P47884 311 aa18.44■□□□□ 0.54
SH3BP2-220ENST00000511663 CARSP49589 748 aaKnown RBP18.44■□□□□ 0.54
SH3BP2-220ENST00000511663 CRADDP78560 199 aa18.44■□□□□ 0.54
SH3BP2-220ENST00000511663 RNF187Q5TA31 235 aaPredicted RBP18.44■□□□□ 0.54
SH3BP2-220ENST00000511663 HIST2H2BCQ6DN03 193 aa18.44■□□□□ 0.54
SH3BP2-220ENST00000511663 CNSTQ6PJW8 725 aa18.44■□□□□ 0.54
SH3BP2-220ENST00000511663 SHISA6Q6ZSJ9 500 aa18.44■□□□□ 0.54
SH3BP2-220ENST00000511663 PARP9Q8IXQ6 854 aa18.44■□□□□ 0.54
SH3BP2-220ENST00000511663 LHPPQ9H008 270 aa18.44■□□□□ 0.54
SH3BP2-220ENST00000511663 TREX1Q9NSU2 369 aa18.44■□□□□ 0.54
SH3BP2-220ENST00000511663 ZKSCAN5Q9Y2L8 839 aa18.44■□□□□ 0.54
SH3BP2-220ENST00000511663 MAU2Q9Y6X3 613 aa18.44■□□□□ 0.54
SH3BP2-220ENST00000511663 SHANK1Q9Y566 2161 aa18.44■□□□□ 0.54
SH3BP2-220ENST00000511663 COL12A1Q99715 3063 aa18.43■□□□□ 0.54
SH3BP2-220ENST00000511663 A0A0J9YVX5 310 aa18.43■□□□□ 0.54
SH3BP2-220ENST00000511663 FITM1A5D6W6 292 aa18.43■□□□□ 0.54
SH3BP2-220ENST00000511663 SOCS6O14544 535 aa18.43■□□□□ 0.54
SH3BP2-220ENST00000511663 PRICKLE3O43900 615 aaPredicted RBP18.43■□□□□ 0.54
SH3BP2-220ENST00000511663 VAPBO95292 243 aa18.43■□□□□ 0.54
SH3BP2-220ENST00000511663 CHRM3P20309 590 aa18.43■□□□□ 0.54
SH3BP2-220ENST00000511663 CMPK1P30085 196 aa18.43■□□□□ 0.54
SH3BP2-220ENST00000511663 CDC25BP30305 580 aa18.43■□□□□ 0.54
SH3BP2-220ENST00000511663 FMO4P31512 558 aa18.43■□□□□ 0.54
SH3BP2-220ENST00000511663 BDKRB1P46663 353 aa18.43■□□□□ 0.54
SH3BP2-220ENST00000511663 SARNPP82979 210 aaKnown RBP18.43■□□□□ 0.54
SH3BP2-220ENST00000511663 MEI1Q5TIA1 1274 aa18.43■□□□□ 0.54
SH3BP2-220ENST00000511663 PRMT9Q6P2P2 845 aa18.43■□□□□ 0.54
SH3BP2-220ENST00000511663 DRICH1Q6PGQ1 229 aaPredicted RBP18.43■□□□□ 0.54
SH3BP2-220ENST00000511663 KIRREL2Q6UWL6 708 aa18.43■□□□□ 0.54
SH3BP2-220ENST00000511663 METTL27Q8N6F8 245 aaPredicted RBP18.43■□□□□ 0.54
SH3BP2-220ENST00000511663 OR2L3Q8NG85 312 aa18.43■□□□□ 0.54
SH3BP2-220ENST00000511663 HMGCLL1Q8TB92 370 aa18.43■□□□□ 0.54
SH3BP2-220ENST00000511663 PPP4R1Q8TF05 950 aa18.43■□□□□ 0.54
SH3BP2-220ENST00000511663 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.43■□□□□ 0.54
SH3BP2-220ENST00000511663 MIEF2Q96C03 454 aa18.43■□□□□ 0.54
SH3BP2-220ENST00000511663 SPSB2Q99619 263 aa18.43■□□□□ 0.54
SH3BP2-220ENST00000511663 CRB3Q9BUF7 120 aa18.43■□□□□ 0.54
SH3BP2-220ENST00000511663 ZBTB20Q9HC78 741 aaPredicted RBP18.43■□□□□ 0.54
SH3BP2-220ENST00000511663 UTP6Q9NYH9 597 aaKnown RBP18.43■□□□□ 0.54
SH3BP2-220ENST00000511663 SPATA7Q9P0W8 599 aa18.43■□□□□ 0.54
SH3BP2-220ENST00000511663 ZNF282Q9UDV7 671 aaPredicted RBP18.43■□□□□ 0.54
SH3BP2-220ENST00000511663 NFS1Q9Y697 457 aa18.43■□□□□ 0.54
SH3BP2-220ENST00000511663 RP1L1Q8IWN7 2480 aaPredicted RBP18.43■□□□□ 0.54
SH3BP2-220ENST00000511663 PCSK5Q92824 1860 aa18.42■□□□□ 0.54
SH3BP2-220ENST00000511663 PAMP19021 973 aa18.42■□□□□ 0.54
SH3BP2-220ENST00000511663 CDK16Q00536 496 aa18.42■□□□□ 0.54
SH3BP2-220ENST00000511663 HIF1AQ16665 826 aa18.42■□□□□ 0.54
SH3BP2-220ENST00000511663 MUM1Q2TAK8 710 aa18.42■□□□□ 0.54
SH3BP2-220ENST00000511663 ANKRD20A4Q4UJ75 823 aa18.42■□□□□ 0.54
SH3BP2-220ENST00000511663 MAMDC2Q7Z304 686 aaPredicted RBP18.42■□□□□ 0.54
SH3BP2-220ENST00000511663 CUZD1Q86UP6 607 aa18.42■□□□□ 0.54
SH3BP2-220ENST00000511663 THOC3Q96J01 351 aaKnown RBP18.42■□□□□ 0.54
SH3BP2-220ENST00000511663 CNDP1Q96KN2 507 aa18.42■□□□□ 0.54
SH3BP2-220ENST00000511663 ZNF285Q96NJ3 590 aa18.42■□□□□ 0.54
SH3BP2-220ENST00000511663 TCF12Q99081 682 aa18.42■□□□□ 0.54
SH3BP2-220ENST00000511663 YIPF2Q9BWQ6 316 aa18.42■□□□□ 0.54
SH3BP2-220ENST00000511663 ENAMQ9NRM1 1142 aa18.42■□□□□ 0.54
SH3BP2-220ENST00000511663 HOMER3Q9NSC5 361 aa18.42■□□□□ 0.54
SH3BP2-220ENST00000511663 CDC14AQ9UNH5 594 aa18.42■□□□□ 0.54
SH3BP2-220ENST00000511663 PCDHGA10Q9Y5H3 936 aa18.42■□□□□ 0.54
SH3BP2-220ENST00000511663 HS3ST3B1Q9Y662 390 aa18.42■□□□□ 0.54
SH3BP2-220ENST00000511663 RELNP78509 3460 aa18.42■□□□□ 0.54
SH3BP2-220ENST00000511663 E5RI56 91 aa18.41■□□□□ 0.54
SH3BP2-220ENST00000511663 PRPF4O43172 522 aaKnown RBP eCLIP18.41■□□□□ 0.542e-6■□□□□ 8.6
SH3BP2-220ENST00000511663 CTSVO60911 334 aa18.41■□□□□ 0.54
SH3BP2-220ENST00000511663 ALOX12BO75342 701 aa18.41■□□□□ 0.54
SH3BP2-220ENST00000511663 VPS26AO75436 327 aa18.41■□□□□ 0.54
SH3BP2-220ENST00000511663 MGAT1P26572 445 aa18.41■□□□□ 0.54
SH3BP2-220ENST00000511663 PSMB5P28074 263 aa18.41■□□□□ 0.54
SH3BP2-220ENST00000511663 CDC16Q13042 620 aa18.41■□□□□ 0.54
SH3BP2-220ENST00000511663 TSTA3Q13630 321 aaPredicted RBP18.41■□□□□ 0.54
SH3BP2-220ENST00000511663 LRRC8BQ6P9F7 803 aa18.41■□□□□ 0.54
SH3BP2-220ENST00000511663 COX15Q7KZN9 410 aa18.41■□□□□ 0.54
SH3BP2-220ENST00000511663 TMEM151BQ8IW70 566 aa18.41■□□□□ 0.54
SH3BP2-220ENST00000511663 OR2A1Q8NGT9 310 aa18.41■□□□□ 0.54
SH3BP2-220ENST00000511663 CABS1Q96KC9 395 aa18.41■□□□□ 0.54
SH3BP2-220ENST00000511663 ZFYVE21Q9BQ24 234 aa18.41■□□□□ 0.54
SH3BP2-220ENST00000511663 KIFC1Q9BW19 673 aa18.41■□□□□ 0.54
SH3BP2-220ENST00000511663 FAM114A2Q9NRY5 505 aa18.41■□□□□ 0.54
SH3BP2-220ENST00000511663 CTSFQ9UBX1 484 aa18.41■□□□□ 0.54
SH3BP2-220ENST00000511663 TSR3Q9UJK0 312 aaKnown RBP18.41■□□□□ 0.54
SH3BP2-220ENST00000511663 ERRFI1Q9UJM3 462 aaPredicted RBP18.41■□□□□ 0.54
SH3BP2-220ENST00000511663 RUVBL2Q9Y230 463 aaKnown RBP18.41■□□□□ 0.54
SH3BP2-220ENST00000511663 VPS9D1Q9Y2B5 631 aa18.41■□□□□ 0.54
SH3BP2-220ENST00000511663 KLK4Q9Y5K2 254 aa18.41■□□□□ 0.54
SH3BP2-220ENST00000511663 FER1L5A0AVI2 2057 aa18.4■□□□□ 0.54
SH3BP2-220ENST00000511663 ANKRD12Q6UB98 2062 aa18.4■□□□□ 0.54
SH3BP2-220ENST00000511663 VSTM2BA6NLU5 285 aa18.4■□□□□ 0.54
SH3BP2-220ENST00000511663 ZNF839A8K0R7 811 aa18.4■□□□□ 0.54
SH3BP2-220ENST00000511663 MAP2K7O14733 419 aa18.4■□□□□ 0.54
SH3BP2-220ENST00000511663 FGGP02679 453 aa18.4■□□□□ 0.54
SH3BP2-220ENST00000511663 ESR1P03372 595 aa18.4■□□□□ 0.54
SH3BP2-220ENST00000511663 CXCR2P25025 360 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms