RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 CTNNA1P35221 906 aaKnown RBP2.91□□□□□ -1.94
CHD1-207ENST00000511628 NKX2-1P43699 371 aaPredicted RBP2.91□□□□□ -1.94
CHD1-207ENST00000511628 KCNJ1P48048 391 aa2.91□□□□□ -1.94
CHD1-207ENST00000511628 KCNJ10P78508 379 aa2.91□□□□□ -1.94
CHD1-207ENST00000511628 CUL3Q13618 768 aa2.91□□□□□ -1.94
CHD1-207ENST00000511628 PTK6Q13882 451 aa2.91□□□□□ -1.94
CHD1-207ENST00000511628 VEZF1Q14119 521 aa2.91□□□□□ -1.94
CHD1-207ENST00000511628 RRS1Q15050 365 aaKnown RBP2.91□□□□□ -1.94
CHD1-207ENST00000511628 UGT3A2Q3SY77 523 aa2.91□□□□□ -1.94
CHD1-207ENST00000511628 NHSL2Q5HYW2 709 aa2.91□□□□□ -1.94
CHD1-207ENST00000511628 WDR38Q5JTN6 314 aa2.91□□□□□ -1.94
CHD1-207ENST00000511628 FAM91A1Q658Y4 838 aa2.91□□□□□ -1.94
CHD1-207ENST00000511628 ZNF790Q6PG37 636 aa2.91□□□□□ -1.94
CHD1-207ENST00000511628 C15orf39Q6ZRI6 1047 aa2.91□□□□□ -1.94
CHD1-207ENST00000511628 PIWIL3Q7Z3Z3 882 aaKnown RBP2.91□□□□□ -1.94
CHD1-207ENST00000511628 TRPT1Q86TN4 253 aaKnown RBP2.91□□□□□ -1.94
CHD1-207ENST00000511628 TMEM139Q8IV31 216 aa2.91□□□□□ -1.94
CHD1-207ENST00000511628 GPALPP1Q8IXQ4 340 aa2.91□□□□□ -1.94
CHD1-207ENST00000511628 SIX6OS1Q8N1H7 587 aa2.91□□□□□ -1.94
CHD1-207ENST00000511628 THAP8Q8NA92 274 aa2.91□□□□□ -1.94
CHD1-207ENST00000511628 OR2T12Q8NG77 320 aa2.91□□□□□ -1.94
CHD1-207ENST00000511628 HEXDCQ8WVB3 486 aa2.91□□□□□ -1.94
CHD1-207ENST00000511628 PIGBQ92521 554 aa2.91□□□□□ -1.94
CHD1-207ENST00000511628 FAM162AQ96A26 154 aa2.91□□□□□ -1.94
CHD1-207ENST00000511628 ZNF524Q96C55 264 aa2.91□□□□□ -1.94
CHD1-207ENST00000511628 LGALS12Q96DT0 336 aa2.91□□□□□ -1.94
CHD1-207ENST00000511628 SGK494Q96LW2 274 aa2.91□□□□□ -1.94
CHD1-207ENST00000511628 MYADMQ96S97 322 aa2.91□□□□□ -1.94
CHD1-207ENST00000511628 PSD2Q9BQI7 771 aa2.91□□□□□ -1.94
CHD1-207ENST00000511628 FERMT1Q9BQL6 677 aa2.91□□□□□ -1.94
CHD1-207ENST00000511628 EGLN1Q9GZT9 426 aa2.91□□□□□ -1.94
CHD1-207ENST00000511628 Q9H8V8 135 aa2.91□□□□□ -1.94
CHD1-207ENST00000511628 CDH20Q9HBT6 801 aa2.91□□□□□ -1.94
CHD1-207ENST00000511628 SLC52A3Q9NQ40 469 aa2.91□□□□□ -1.94
CHD1-207ENST00000511628 OLFML3Q9NRN5 406 aa2.91□□□□□ -1.94
CHD1-207ENST00000511628 COQ3Q9NZJ6 369 aa2.91□□□□□ -1.94
CHD1-207ENST00000511628 ZNF624Q9P2J8 865 aaPredicted RBP2.91□□□□□ -1.94
CHD1-207ENST00000511628 HTR3EA5X5Y0 456 aa2.9□□□□□ -1.95
CHD1-207ENST00000511628 C5orf52A6NGY3 159 aa2.9□□□□□ -1.95
CHD1-207ENST00000511628 DNM1LO00429 736 aa2.9□□□□□ -1.95
CHD1-207ENST00000511628 PSMD14O00487 310 aa2.9□□□□□ -1.95
CHD1-207ENST00000511628 ST8SIA3O43173 380 aa2.9□□□□□ -1.95
CHD1-207ENST00000511628 ATP6AP2O75787 350 aa2.9□□□□□ -1.95
CHD1-207ENST00000511628 PLA2G4BP0C869 781 aa2.9□□□□□ -1.95
CHD1-207ENST00000511628 ZNF883P0CG24 379 aa2.9□□□□□ -1.95
CHD1-207ENST00000511628 ACAT1P24752 427 aaKnown RBP2.9□□□□□ -1.95
CHD1-207ENST00000511628 PSMB4P28070 264 aa2.9□□□□□ -1.95
CHD1-207ENST00000511628 COPB2P35606 906 aa2.9□□□□□ -1.95
CHD1-207ENST00000511628 NAGLUP54802 743 aa2.9□□□□□ -1.95
CHD1-207ENST00000511628 CDH11P55287 796 aa2.9□□□□□ -1.95
CHD1-207ENST00000511628 CLDN15P56746 228 aa2.9□□□□□ -1.95
CHD1-207ENST00000511628 C17orf67Q0P5P2 114 aa2.9□□□□□ -1.95
CHD1-207ENST00000511628 TAZQ16635 292 aa2.9□□□□□ -1.95
CHD1-207ENST00000511628 ITPRIPL2Q3MIP1 535 aa2.9□□□□□ -1.95
CHD1-207ENST00000511628 MCMDC2Q4G0Z9 681 aa2.9□□□□□ -1.95
CHD1-207ENST00000511628 LACTB2Q53H82 288 aaPredicted RBP2.9□□□□□ -1.95
CHD1-207ENST00000511628 XKR3Q5GH77 459 aa2.9□□□□□ -1.95
CHD1-207ENST00000511628 DCAF10Q5QP82 559 aa2.9□□□□□ -1.95
CHD1-207ENST00000511628 ELFN2Q5R3F8 820 aa2.9□□□□□ -1.95
CHD1-207ENST00000511628 SUSD4Q5VX71 490 aa2.9□□□□□ -1.95
CHD1-207ENST00000511628 RBMS3Q6XE24 437 aaKnown RBP2.9□□□□□ -1.95
CHD1-207ENST00000511628 STXBP4Q6ZWJ1 553 aa2.9□□□□□ -1.95
CHD1-207ENST00000511628 OTOAQ7RTW8 1153 aa2.9□□□□□ -1.95
CHD1-207ENST00000511628 PLD3Q8IV08 490 aa2.9□□□□□ -1.95
CHD1-207ENST00000511628 MMD2Q8IY49 270 aa2.9□□□□□ -1.95
CHD1-207ENST00000511628 APCDD1Q8J025 514 aa2.9□□□□□ -1.95
CHD1-207ENST00000511628 OR1J1Q8NGS3 322 aa2.9□□□□□ -1.95
CHD1-207ENST00000511628 GDAP1Q8TB36 358 aa2.9□□□□□ -1.95
CHD1-207ENST00000511628 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.9□□□□□ -1.95
CHD1-207ENST00000511628 SLC47A1Q96FL8 570 aa2.9□□□□□ -1.95
CHD1-207ENST00000511628 VMP1Q96GC9 406 aa2.9□□□□□ -1.95
CHD1-207ENST00000511628 CCDC114Q96M63 670 aa2.9□□□□□ -1.95
CHD1-207ENST00000511628 FAM20AQ96MK3 541 aa2.9□□□□□ -1.95
CHD1-207ENST00000511628 LITAFQ99732 161 aa2.9□□□□□ -1.95
CHD1-207ENST00000511628 CCDC3Q9BQI4 270 aa2.9□□□□□ -1.95
CHD1-207ENST00000511628 RTP3Q9BQQ7 232 aa2.9□□□□□ -1.95
CHD1-207ENST00000511628 FN3KQ9H479 309 aa2.9□□□□□ -1.95
CHD1-207ENST00000511628 LMAN1LQ9HAT1 526 aa2.9□□□□□ -1.95
CHD1-207ENST00000511628 ZBTB20Q9HC78 741 aaPredicted RBP2.9□□□□□ -1.95
CHD1-207ENST00000511628 RAB9BQ9NP90 201 aa2.9□□□□□ -1.95
CHD1-207ENST00000511628 A0A0U1RQK1 487 aa2.89□□□□□ -1.95
CHD1-207ENST00000511628 ZNF320A2RRD8 509 aa2.89□□□□□ -1.95
CHD1-207ENST00000511628 CASTOR2A6NHX0 329 aa2.89□□□□□ -1.95
CHD1-207ENST00000511628 ERI2A8K979 691 aaKnown RBP2.89□□□□□ -1.95
CHD1-207ENST00000511628 CCL24O00175 119 aa2.89□□□□□ -1.95
CHD1-207ENST00000511628 PLOD2O00469 737 aa2.89□□□□□ -1.95
CHD1-207ENST00000511628 WDR46O15213 610 aaKnown RBP2.89□□□□□ -1.95
CHD1-207ENST00000511628 SLC22A2O15244 555 aa2.89□□□□□ -1.95
CHD1-207ENST00000511628 SELENOFO60613 162 aa2.89□□□□□ -1.95
CHD1-207ENST00000511628 PRAF2O60831 178 aa2.89□□□□□ -1.95
CHD1-207ENST00000511628 NME6O75414 186 aaPredicted RBP2.89□□□□□ -1.95
CHD1-207ENST00000511628 TSHBP01222 138 aa2.89□□□□□ -1.95
CHD1-207ENST00000511628 EPCAMP16422 314 aa2.89□□□□□ -1.95
CHD1-207ENST00000511628 EEF1B2P24534 225 aaKnown RBP2.89□□□□□ -1.95
CHD1-207ENST00000511628 TIA1P31483 386 aaKnown RBP eCLIP2.89□□□□□ -1.95
CHD1-207ENST00000511628 SLC6A6P31641 620 aa2.89□□□□□ -1.95
CHD1-207ENST00000511628 MNDAP41218 407 aa2.89□□□□□ -1.95
CHD1-207ENST00000511628 WNT5AP41221 380 aa2.89□□□□□ -1.95
CHD1-207ENST00000511628 TAF6P49848 677 aa2.89□□□□□ -1.95
CHD1-207ENST00000511628 RPS18P62269 152 aaKnown RBP2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms