RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 DRG2P55039 364 aaKnown RBP2.88□□□□□ -1.95
NEDD4-208ENST00000508342 ITGA1P56199 1179 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 VAMP2P63027 116 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 SERINC3Q13530 473 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 PKP1Q13835 747 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 DPYSQ14117 519 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 GBX1Q14549 363 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 PLK5Q496M5 336 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 ATP6AP1LQ52LC2 224 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 ANKRD39Q53RE8 183 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 KRTCAP3Q53RY4 240 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 FGD3Q5JSP0 725 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 PRAMEF14Q5SWL7 426 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 LRRC66Q68CR7 880 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 CDC73Q6P1J9 531 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 GFRALQ6UXV0 394 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 UNQ6126/PRO20091Q6UXV3 157 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF574Q6ZN55 896 aaPredicted RBP2.88□□□□□ -1.95
NEDD4-208ENST00000508342 FAM220AQ7Z4H9 259 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 EXOC3L1Q86VI1 746 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 TMC8Q8IU68 726 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 IRF2BP1Q8IU81 584 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 IZUMO1Q8IYV9 350 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 MCOLN2Q8IZK6 566 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 AGBL5Q8NDL9 886 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 OR2AP1Q8NGE2 309 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 METTL6Q8TCB7 284 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 CPT1BQ92523 772 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 MTERF3Q96E29 417 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 MRGPRX1Q96LB2 322 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF641Q96N77 438 aaPredicted RBP2.88□□□□□ -1.95
NEDD4-208ENST00000508342 AIF1LQ9BQI0 150 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 ZPBPQ9BS86 351 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 PACSIN1Q9BY11 444 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 RNF38Q9H0F5 515 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 OCEL1Q9H607 264 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 EXD2Q9NVH0 621 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 PIH1D1Q9NWS0 290 aaKnown RBP2.88□□□□□ -1.95
NEDD4-208ENST00000508342 HS3ST3A1Q9Y663 406 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 SHROOM3Q8TF72 1996 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 SEC16AO15027 2179 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 GRID2O43424 1007 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 SEC22BO75396 215 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 SYNGR4O95473 234 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF682O95780 498 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 CSF2P04141 144 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 PIRTP0C851 137 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 NR2F1P10589 423 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 CD44P16070 742 aaKnown RBP2.88□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF30P17039 623 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 RCVRNP35243 200 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 SLC26A3P40879 764 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 CCNFP41002 786 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 BUD31P41223 144 aaPredicted RBP2.88□□□□□ -1.95
NEDD4-208ENST00000508342 CLCNKAP51800 687 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 VSX2P58304 361 aaPredicted RBP2.88□□□□□ -1.95
NEDD4-208ENST00000508342 SLC7A5Q01650 507 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 MAPK7Q13164 816 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF621Q6ZSS3 439 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 USP30Q70CQ3 517 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 GPRIN1Q7Z2K8 1008 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 LYSMD3Q7Z3D4 306 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 STK32CQ86UX6 486 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 TMPRSS12Q86WS5 348 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 GPSM1Q86YR5 675 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 MICU2Q8IYU8 434 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 CPXM2Q8N436 756 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 RTL3Q8N8U3 475 aaKnown RBP2.88□□□□□ -1.95
NEDD4-208ENST00000508342 FAM45AQ8TCE6 357 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 IGSF8Q969P0 613 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 EFHD2Q96C19 240 aaPredicted RBP2.88□□□□□ -1.95
NEDD4-208ENST00000508342 FAM120BQ96EK7 910 aaKnown RBP2.88□□□□□ -1.95
NEDD4-208ENST00000508342 PRICKLE1Q96MT3 831 aaPredicted RBP2.88□□□□□ -1.95
NEDD4-208ENST00000508342 SMOQ99835 787 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 IKZF4Q9H2S9 585 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 SOX17Q9H6I2 414 aaPredicted RBP2.88□□□□□ -1.95
NEDD4-208ENST00000508342 ANKHQ9HCJ1 492 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 TMEM248Q9NWD8 314 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 WASF2Q9Y6W5 498 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 FAM187AA6NFU0 413 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 PATE3B3GLJ2 98 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 ADAMTS3O15072 1205 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 RAD1O60671 282 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 ATP1A3P13637 1013 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 CEACAM1P13688 526 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 UGT1A5P35504 534 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 ACVRL1P37023 503 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 HSPA13P48723 471 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 TTPAP49638 278 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 ST13P50502 369 aaKnown RBP2.88□□□□□ -1.95
NEDD4-208ENST00000508342 CCR5P51681 352 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 CTBP2P56545 445 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 RAC1P63000 192 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 CSNK2BP67870 215 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 SRYQ05066 204 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 PPIDQ08752 370 aaKnown RBP2.88□□□□□ -1.95
NEDD4-208ENST00000508342 DYNC1I2Q13409 638 aaKnown RBP2.88□□□□□ -1.95
NEDD4-208ENST00000508342 C9orf64Q5T6V5 341 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 RNASEH2BQ5TBB1 312 aaKnown RBP2.88□□□□□ -1.95
NEDD4-208ENST00000508342 FOXR2Q6PJQ5 311 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms