RNA–Protein interactions for RNA: ENST00000507476.5

LINC01088-203, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3 BASIC

Gene LINC01088, Length 785 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-203ENST00000507476 JRKO75564 520 aa4.4□□□□□ -1.71
LINC01088-203ENST00000507476 OR52Z1P0C646 297 aa4.4□□□□□ -1.71
LINC01088-203ENST00000507476 CHATP28329 748 aa4.4□□□□□ -1.71
LINC01088-203ENST00000507476 MAGEA4P43358 317 aa4.4□□□□□ -1.71
LINC01088-203ENST00000507476 KCNJ1P48048 391 aa4.4□□□□□ -1.71
LINC01088-203ENST00000507476 NAGLUP54802 743 aa4.4□□□□□ -1.71
LINC01088-203ENST00000507476 CDH13P55290 713 aa4.4□□□□□ -1.71
LINC01088-203ENST00000507476 TAS2R40P59535 323 aa4.4□□□□□ -1.71
LINC01088-203ENST00000507476 SIRPAP78324 504 aa4.4□□□□□ -1.71
LINC01088-203ENST00000507476 MRPS34P82930 218 aaKnown RBP4.4□□□□□ -1.71
LINC01088-203ENST00000507476 KRT24Q2M2I5 525 aa4.4□□□□□ -1.71
LINC01088-203ENST00000507476 HFEQ30201 348 aa4.4□□□□□ -1.71
LINC01088-203ENST00000507476 MAJINQ3KP22 176 aa4.4□□□□□ -1.71
LINC01088-203ENST00000507476 TMEM30BQ3MIR4 351 aa4.4□□□□□ -1.71
LINC01088-203ENST00000507476 C15orf39Q6ZRI6 1047 aa4.4□□□□□ -1.71
LINC01088-203ENST00000507476 ABI3BPQ7Z7G0 1075 aa4.4□□□□□ -1.71
LINC01088-203ENST00000507476 TMEM173Q86WV6 379 aaPredicted RBP4.4□□□□□ -1.71
LINC01088-203ENST00000507476 TMEM219Q86XT9 240 aa4.4□□□□□ -1.71
LINC01088-203ENST00000507476 FOXRED2Q8IWF2 684 aa4.4□□□□□ -1.71
LINC01088-203ENST00000507476 CHERPQ8IWX8 916 aaKnown RBP4.4□□□□□ -1.71
LINC01088-203ENST00000507476 SPEM1Q8N4L4 309 aa4.4□□□□□ -1.71
LINC01088-203ENST00000507476 OR14L1PQ8NHC6 308 aa4.4□□□□□ -1.71
LINC01088-203ENST00000507476 C9orf43Q8TAL5 461 aaPredicted RBP4.4□□□□□ -1.71
LINC01088-203ENST00000507476 FAM76AQ8TAV0 307 aa4.4□□□□□ -1.71
LINC01088-203ENST00000507476 SPSB1Q96BD6 273 aa4.4□□□□□ -1.71
LINC01088-203ENST00000507476 ARSGQ96EG1 525 aa4.4□□□□□ -1.71
LINC01088-203ENST00000507476 RRNAD1Q96FB5 475 aaKnown RBP4.4□□□□□ -1.71
LINC01088-203ENST00000507476 NSMCE2Q96MF7 247 aa4.4□□□□□ -1.71
LINC01088-203ENST00000507476 PKP2Q99959 881 aa4.4□□□□□ -1.71
LINC01088-203ENST00000507476 KATNB1Q9BVA0 655 aa4.4□□□□□ -1.71
LINC01088-203ENST00000507476 CARD6Q9BX69 1037 aa4.4□□□□□ -1.71
LINC01088-203ENST00000507476 GLIS2Q9BZE0 524 aaPredicted RBP4.4□□□□□ -1.71
LINC01088-203ENST00000507476 GPR88Q9GZN0 384 aa4.4□□□□□ -1.71
LINC01088-203ENST00000507476 RNPEPL1Q9HAU8 725 aa4.4□□□□□ -1.71
LINC01088-203ENST00000507476 CYP39A1Q9NYL5 469 aa4.4□□□□□ -1.71
LINC01088-203ENST00000507476 SPG21Q9NZD8 308 aa4.4□□□□□ -1.71
LINC01088-203ENST00000507476 RALYQ9UKM9 306 aaKnown RBP4.4□□□□□ -1.71
LINC01088-203ENST00000507476 SNX6Q9UNH7 406 aa4.4□□□□□ -1.71
LINC01088-203ENST00000507476 ERVK-11Q9UQG0 969 aa4.4□□□□□ -1.71
LINC01088-203ENST00000507476 PCDHGA5Q9Y5G8 931 aa4.4□□□□□ -1.71
LINC01088-203ENST00000507476 PCDHGA1Q9Y5H4 931 aa4.4□□□□□ -1.71
LINC01088-203ENST00000507476 TRBV2A0A0J9YWF9 115 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 SERINC4A6NH21 518 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 TMEM110-MUSTN1A8MSY1 372 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 AP3B1O00203 1094 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 SLC30A4O14863 429 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 AKAP3O75969 853 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 PGLSO95336 258 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 GH1P01241 217 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 ABHD2P08910 425 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 CCDC159P0C7I6 412 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 C8orf89P0DMQ9 161 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 TOP1P11387 765 aaKnown RBP4.39□□□□□ -1.71
LINC01088-203ENST00000507476 ADRA2CP18825 462 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 NR1D1P20393 614 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 EDN2P20800 178 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 AHCYP23526 432 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 SFNP31947 248 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 FMO5P49326 533 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 GPR143P51810 404 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 CLDN2P57739 230 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 ACSM1Q08AH1 577 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 COX10Q12887 443 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 TRA2AQ13595 282 aaKnown RBP eCLIP4.39□□□□□ -1.71
LINC01088-203ENST00000507476 USP41Q3LFD5 358 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 LRRC23Q53EV4 343 aaPredicted RBP4.39□□□□□ -1.71
LINC01088-203ENST00000507476 FASTKD1Q53R41 847 aaKnown RBP4.39□□□□□ -1.71
LINC01088-203ENST00000507476 BOLA3Q53S33 107 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 LRRC73Q5JTD7 316 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 LRIF1Q5T3J3 769 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 LRRC8EQ6NSJ5 796 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 PSRC1Q6PGN9 363 aaPredicted RBP4.39□□□□□ -1.71
LINC01088-203ENST00000507476 TAF8Q7Z7C8 310 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 LDB1Q86U70 411 aaPredicted RBP4.39□□□□□ -1.71
LINC01088-203ENST00000507476 CCDC83Q8IWF9 413 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 UXS1Q8NBZ7 420 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 SLC24A4Q8NFF2 622 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 OR52K2Q8NGK3 314 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 SLC20A1Q8WUM9 679 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 TUBGCP3Q96CW5 907 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 CFAP36Q96G28 342 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 SMC6Q96SB8 1091 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 HAUS8Q9BT25 410 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 DDX47Q9H0S4 455 aaKnown RBP4.39□□□□□ -1.71
LINC01088-203ENST00000507476 KCNK15Q9H427 330 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 MINDY3Q9H8M7 445 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 NGBQ9NPG2 151 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 PRMT8Q9NR22 394 aaPredicted RBP4.39□□□□□ -1.71
LINC01088-203ENST00000507476 TMOD2Q9NZR1 351 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 SPASTQ9UBP0 616 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 POLLQ9UGP5 575 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 POU2F3Q9UKI9 436 aa4.39□□□□□ -1.71
LINC01088-203ENST00000507476 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.39□□□□□ -1.71
LINC01088-203ENST00000507476 C1orf226A1L170 272 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 ERICH4A6NGS2 130 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 SDR42E2A6NKP2 422 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 PES1O00541 588 aaKnown RBP4.38□□□□□ -1.71
LINC01088-203ENST00000507476 TTI1O43156 1089 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 ST8SIA3O43173 380 aa4.38□□□□□ -1.71
LINC01088-203ENST00000507476 TSPAN1O60635 241 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms