RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 ENTHD1Q8IYW4 607 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 DEPDC4Q8N2C3 294 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 BRSK1Q8TDC3 778 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 SMARCD1Q96GM5 515 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 PPP1R16BQ96T49 567 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 CPPED1Q9BRF8 314 aaPredicted RBP15.5■□□□□ 0.07
SCLT1-208ENST00000506368 CLMPQ9H6B4 373 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 SLC25A37Q9NYZ2 338 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 PDP1Q9P0J1 537 aaPredicted RBP15.5■□□□□ 0.07
SCLT1-208ENST00000506368 SNX7Q9UNH6 387 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 COMMD10Q9Y6G5 202 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 IRAK2O43187 625 aa15.49■□□□□ 0.07
SCLT1-208ENST00000506368 PCDHGA12O60330 932 aa15.49■□□□□ 0.07
SCLT1-208ENST00000506368 WDR47O94967 919 aa15.49■□□□□ 0.07
SCLT1-208ENST00000506368 ARHGEF15O94989 841 aa15.49■□□□□ 0.07
SCLT1-208ENST00000506368 PEX11BO96011 259 aa15.49■□□□□ 0.07
SCLT1-208ENST00000506368 OTCP00480 354 aa15.49■□□□□ 0.07
SCLT1-208ENST00000506368 ATXN1LP0C7T5 689 aaKnown RBP15.49■□□□□ 0.07
SCLT1-208ENST00000506368 CYP4B1P13584 511 aa15.49■□□□□ 0.07
SCLT1-208ENST00000506368 MAGP20916 626 aa15.49■□□□□ 0.07
SCLT1-208ENST00000506368 PRKACBP22694 351 aa15.49■□□□□ 0.07
SCLT1-208ENST00000506368 ALDH9A1P49189 494 aa15.49■□□□□ 0.07
SCLT1-208ENST00000506368 RPP38P78345 283 aaKnown RBP15.49■□□□□ 0.07
SCLT1-208ENST00000506368 IL1RL1Q01638 556 aa15.49■□□□□ 0.07
SCLT1-208ENST00000506368 SCN1BQ07699 218 aa15.49■□□□□ 0.07
SCLT1-208ENST00000506368 MAP2K5Q13163 448 aa15.49■□□□□ 0.07
SCLT1-208ENST00000506368 ASAH1Q13510 395 aa15.49■□□□□ 0.07
SCLT1-208ENST00000506368 SMN1Q16637 294 aaKnown RBP15.49■□□□□ 0.07
SCLT1-208ENST00000506368 CARD16Q5EG05 197 aa15.49■□□□□ 0.07
SCLT1-208ENST00000506368 NOMO2Q5JPE7 1267 aa15.49■□□□□ 0.07
SCLT1-208ENST00000506368 HABP4Q5JVS0 413 aaKnown RBP15.49■□□□□ 0.07
SCLT1-208ENST00000506368 NXNL2Q5VZ03 156 aa15.49■□□□□ 0.07
SCLT1-208ENST00000506368 SLC51BQ86UW2 128 aa15.49■□□□□ 0.07
SCLT1-208ENST00000506368 GPSM1Q86YR5 675 aa15.49■□□□□ 0.07
SCLT1-208ENST00000506368 MSRB3Q8IXL7 192 aa15.49■□□□□ 0.07
SCLT1-208ENST00000506368 RAVER1Q8IY67 606 aaKnown RBP15.49■□□□□ 0.07
SCLT1-208ENST00000506368 OR8H2Q8N162 312 aa15.49■□□□□ 0.07
SCLT1-208ENST00000506368 DNAJC22Q8N4W6 341 aa15.49■□□□□ 0.07
SCLT1-208ENST00000506368 TEX26Q8N6G2 289 aa15.49■□□□□ 0.07
SCLT1-208ENST00000506368 SH3RF2Q8TEC5 729 aa15.49■□□□□ 0.07
SCLT1-208ENST00000506368 DNASE1L2Q92874 299 aa15.49■□□□□ 0.07
SCLT1-208ENST00000506368 TBCDQ9BTW9 1192 aa15.49■□□□□ 0.07
SCLT1-208ENST00000506368 CXCL16Q9H2A7 254 aa15.49■□□□□ 0.07
SCLT1-208ENST00000506368 REEP1Q9H902 201 aa15.49■□□□□ 0.07
SCLT1-208ENST00000506368 DNAH12Q6ZR08 3092 aa15.49■□□□□ 0.07
SCLT1-208ENST00000506368 NYNRINQ9P2P1 1898 aaKnown RBP15.49■□□□□ 0.07
SCLT1-208ENST00000506368 MKI67P46013 3256 aaKnown RBP15.49■□□□□ 0.07
SCLT1-208ENST00000506368 ERVH48-1M5A8F1 160 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 BTN3A1O00481 513 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 VPS26AO75436 327 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 SEMG1P04279 462 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 CAPN1P07384 714 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 ELNP15502 786 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 POLR2CP19387 275 aaPredicted RBP15.48■□□□□ 0.07
SCLT1-208ENST00000506368 ATN1P54259 1190 aaPredicted RBP15.48■□□□□ 0.07
SCLT1-208ENST00000506368 ITGA1P56199 1179 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 ERVPABLB-1P60509 514 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 PPP1R8Q12972 351 aaKnown RBP15.48■□□□□ 0.07
SCLT1-208ENST00000506368 CAMK2GQ13555 558 aaPredicted RBP15.48■□□□□ 0.07
SCLT1-208ENST00000506368 GTF2H3Q13889 308 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 SUZ12Q15022 739 aaKnown RBP15.48■□□□□ 0.07
SCLT1-208ENST00000506368 ZNF792Q3KQV3 632 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 FAM174BQ3ZCQ3 159 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 SCIMPQ6UWF3 145 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 GCNT7Q6ZNI0 430 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 MSANTD1Q6ZTZ1 278 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 SERPINA11Q86U17 422 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 UMODL1-AS1Q8N2C9 162 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 ATG16L2Q8NAA4 619 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 DENND6BQ8NEG7 585 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 EPYCQ99645 322 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 CSNK1G1Q9HCP0 422 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 VNN3Q9NY84 501 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 SRRDQ9UH36 339 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 PCDHB5Q9Y5E4 795 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 HHLA1C9JL84 531 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 C9P02748 559 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 PTX3P26022 381 aaPredicted RBP15.48■□□□□ 0.07
SCLT1-208ENST00000506368 PCDH1Q08174 1060 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 TNK1Q13470 666 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 C5orf22Q49AR2 442 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 CREB3L2Q70SY1 520 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 CEP68Q76N32 757 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 RDH10Q8IZV5 341 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 ZMIZ2Q8NF64 920 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 EDEM1Q92611 657 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 ITCHQ96J02 903 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 TRNT1Q96Q11 434 aaKnown RBP15.48■□□□□ 0.07
SCLT1-208ENST00000506368 TTYH2Q9BSA4 534 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 RHNO1Q9BSD3 238 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 SIK2Q9H0K1 926 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 MIR1-1HGQ9H1L0 117 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 IKZF5Q9H5V7 419 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 NT5MQ9NPB1 228 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 TOR4AQ9NXH8 423 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 CD274Q9NZQ7 290 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 IKZF3Q9UKT9 509 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 NUP50Q9UKX7 468 aa15.48■□□□□ 0.07
SCLT1-208ENST00000506368 SAMHD1Q9Y3Z3 626 aaKnown RBP15.48■□□□□ 0.07
SCLT1-208ENST00000506368 LOC100506127A0A0U1RQW1 187 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms