RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 CES5AQ6NT32 575 aa16.76■□□□□ 0.27
TRAPPC11-204ENST00000505676 TMEM132CQ8N3T6 1108 aa16.76■□□□□ 0.27
TRAPPC11-204ENST00000505676 OR9A1PQ8NGU1 263 aa16.76■□□□□ 0.27
TRAPPC11-204ENST00000505676 SETD7Q8WTS6 366 aaKnown RBP16.76■□□□□ 0.27
TRAPPC11-204ENST00000505676 CENPNQ96H22 339 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC11-204ENST00000505676 HHIPQ96QV1 700 aa16.76■□□□□ 0.27
TRAPPC11-204ENST00000505676 C9orf16Q9BUW7 83 aa16.76■□□□□ 0.27
TRAPPC11-204ENST00000505676 GORASP2Q9H8Y8 452 aa16.76■□□□□ 0.27
TRAPPC11-204ENST00000505676 SLC28A3Q9HAS3 691 aa16.76■□□□□ 0.27
TRAPPC11-204ENST00000505676 AGPAT4Q9NRZ5 378 aa16.76■□□□□ 0.27
TRAPPC11-204ENST00000505676 ATXN10Q9UBB4 475 aa16.76■□□□□ 0.27
TRAPPC11-204ENST00000505676 EGFL7Q9UHF1 273 aa16.76■□□□□ 0.27
TRAPPC11-204ENST00000505676 TSC22D4Q9Y3Q8 395 aa16.76■□□□□ 0.27
TRAPPC11-204ENST00000505676 DYRK1BQ9Y463 629 aa16.76■□□□□ 0.27
TRAPPC11-204ENST00000505676 MAGEA10P43363 369 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC11-204ENST00000505676 CHN2P52757 468 aa16.76■□□□□ 0.27
TRAPPC11-204ENST00000505676 DGKQP52824 942 aa16.76■□□□□ 0.27
TRAPPC11-204ENST00000505676 CAMK2GQ13555 558 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC11-204ENST00000505676 DOC2AQ14183 400 aa16.76■□□□□ 0.27
TRAPPC11-204ENST00000505676 CYP51A1Q16850 503 aa16.76■□□□□ 0.27
TRAPPC11-204ENST00000505676 SPIN4Q56A73 249 aa16.76■□□□□ 0.27
TRAPPC11-204ENST00000505676 SPANXN4Q5MJ08 99 aa16.76■□□□□ 0.27
TRAPPC11-204ENST00000505676 PIP5KL1Q5T9C9 394 aa16.76■□□□□ 0.27
TRAPPC11-204ENST00000505676 PPP4R4Q6NUP7 873 aa16.76■□□□□ 0.27
TRAPPC11-204ENST00000505676 SYCE2Q6PIF2 218 aa16.76■□□□□ 0.27
TRAPPC11-204ENST00000505676 CFAP206Q8IYR0 622 aa16.76■□□□□ 0.27
TRAPPC11-204ENST00000505676 UBE2E3Q969T4 207 aa16.76■□□□□ 0.27
TRAPPC11-204ENST00000505676 MYCBPQ99417 103 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC11-204ENST00000505676 SGPP1Q9BX95 441 aa16.76■□□□□ 0.27
TRAPPC11-204ENST00000505676 CERS4Q9HA82 394 aa16.76■□□□□ 0.27
TRAPPC11-204ENST00000505676 SIRT5Q9NXA8 310 aa16.76■□□□□ 0.27
TRAPPC11-204ENST00000505676 DLGAP2Q9P1A6 1054 aa16.76■□□□□ 0.27
TRAPPC11-204ENST00000505676 COQ6Q9Y2Z9 468 aa16.76■□□□□ 0.27
TRAPPC11-204ENST00000505676 SLC16A8O95907 504 aa16.75■□□□□ 0.27
TRAPPC11-204ENST00000505676 CDH1P12830 882 aa16.75■□□□□ 0.27
TRAPPC11-204ENST00000505676 SDC1P18827 310 aa16.75■□□□□ 0.27
TRAPPC11-204ENST00000505676 TRPC1P48995 793 aa16.75■□□□□ 0.27
TRAPPC11-204ENST00000505676 POLE2P56282 527 aa16.75■□□□□ 0.27
TRAPPC11-204ENST00000505676 CYP4F3Q08477 520 aa16.75■□□□□ 0.27
TRAPPC11-204ENST00000505676 MTAPQ13126 283 aa16.75■□□□□ 0.27
TRAPPC11-204ENST00000505676 RUNDC3AQ59EK9 446 aa16.75■□□□□ 0.27
TRAPPC11-204ENST00000505676 NOXRED1Q6NXP6 359 aa16.75■□□□□ 0.27
TRAPPC11-204ENST00000505676 LPCAT2Q7L5N7 544 aa16.75■□□□□ 0.27
TRAPPC11-204ENST00000505676 PHC3Q8NDX5 983 aa16.75■□□□□ 0.27
TRAPPC11-204ENST00000505676 MED8Q96G25 268 aa16.75■□□□□ 0.27
TRAPPC11-204ENST00000505676 PPM1MQ96MI6 270 aa16.75■□□□□ 0.27
TRAPPC11-204ENST00000505676 FAM192AQ9GZU8 254 aa16.75■□□□□ 0.27
TRAPPC11-204ENST00000505676 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC11-204ENST00000505676 AURKCQ9UQB9 309 aa16.75■□□□□ 0.27
TRAPPC11-204ENST00000505676 AP4B1Q9Y6B7 739 aa16.75■□□□□ 0.27
TRAPPC11-204ENST00000505676 STON1Q9Y6Q2 735 aa16.75■□□□□ 0.27
TRAPPC11-204ENST00000505676 TXNDC9O14530 226 aa16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 POP7O75817 140 aaKnown RBP16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 SCELO95171 688 aa16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 ANXA6P08133 673 aa16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 GGT1P19440 569 aa16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 PBLDP30039 288 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 BDKRB1P46663 353 aa16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 METAP1P53582 386 aa16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 PHEXP78562 749 aa16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 CNTN1Q12860 1018 aa16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 TMTC4Q5T4D3 741 aa16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 GLYATQ6IB77 296 aa16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 CAPRIN2Q6IMN6 1127 aaKnown RBP16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 MED27Q6P2C8 311 aa16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 PNCKQ6P2M8 343 aa16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 MTSS1LQ765P7 747 aa16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 GPR180Q86V85 440 aa16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 RIMKLAQ8IXN7 391 aa16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 OXR1Q8N573 874 aa16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 CXorf40BQ96DE9 158 aa16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 MTFMTQ96DP5 389 aaKnown RBP16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 RIPOR3Q96MK2 946 aa16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 IGFLR1Q9H665 355 aa16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 SLAMF8Q9P0V8 285 aa16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 PPT2Q9UMR5 302 aa16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 TRBV5-3A0A0A0MS03 114 aa16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 FAM220BPB1ANY3 271 aa16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 FOXE1O00358 373 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 PI15O43692 258 aa16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 PBX2P40425 430 aa16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 ACSM2AQ08AH3 577 aa16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 ARHGAP19Q14CB8 494 aa16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 CST6Q15828 149 aa16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 HIST2H2ACQ16777 129 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 ACSM2BQ68CK6 577 aa16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 HIST2H2AA3Q6FI13 130 aa16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 IFNEQ86WN2 208 aa16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 OR2T12Q8NG77 320 aa16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 RAD51AP1Q96B01 352 aa16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 TMEM74Q96NL1 305 aa16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 GBP5Q96PP8 586 aa16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 TRMT61BQ9BVS5 477 aaKnown RBP16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 UGT2B28Q9BY64 529 aa16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 SGK2Q9HBY8 427 aa16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 FAM120CQ9NX05 1096 aaKnown RBP16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 GULP1Q9UBP9 304 aa16.74■□□□□ 0.27
TRAPPC11-204ENST00000505676 E7EQ34 232 aa16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 PRAMEF4O60810 478 aa16.73■□□□□ 0.27
TRAPPC11-204ENST00000505676 ZNF8P17098 575 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms