RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 SSX5O60225 188 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 SNX3O60493 162 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 RNASEH1O60930 286 aaKnown RBP3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 ATP6AP2O75787 350 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 WDPCPO95876 746 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 MT-ATP6P00846 226 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 SERPING1P05155 500 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 IGHV4-30-4P0DP06 118 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 CSF2RAP15509 400 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 POLR2CP19387 275 aaPredicted RBP3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 S1PR1P21453 382 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 CORO1AP31146 461 aaKnown RBP3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 HOXD3P31249 432 aaPredicted RBP3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 SFNP31947 248 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 CAMLGP49069 296 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 PLCD1P51178 756 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 EEF1A1P68104 462 aaKnown RBP3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 ROR2Q01974 943 aaKnown RBP3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 SLC34A1Q06495 639 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 PDE7AQ13946 482 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 EEF1A1P5Q5VTE0 462 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 ELMOD2Q8IZ81 293 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 CPSF7Q8N684 471 aaKnown RBP3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 CLEC1AQ8NC01 280 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 CCNYQ8ND76 341 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 C16orf52Q8NHV5 167 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 DPF1Q92782 380 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 PGM2Q96G03 612 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 NSMCE2Q96MF7 247 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 GDAP1L1Q96MZ0 367 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 OR1F2PQ96R84 312 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 CDK19Q9BWU1 502 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 SLC2A11Q9BYW1 496 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 TSPYL1Q9H0U9 437 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 RWDD1Q9H446 243 aaPredicted RBP3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 CUEDC2Q9H467 287 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 ACKR4Q9NPB9 350 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 P4HTMQ9NXG6 502 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 C1RLQ9NZP8 487 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 KLHL9Q9P2J3 617 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 SPASTQ9UBP0 616 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 KCNN3Q9UGI6 736 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 EXOC6BQ9Y2D4 811 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 ATP8B3O60423 1300 aa3.67□□□□□ -1.82
TRAPPC13-208ENST00000505553 A0A0B4J203 849 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 CFAP73A6NFT4 308 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 CASTOR2A6NHX0 329 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 OR6C75A6NL08 312 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 MPHOSPH10O00566 681 aaKnown RBP3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 KCNAB3O43448 404 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 RGS14O43566 566 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 SMPD2O60906 423 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 ZNF18P17022 549 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 ZNF23P17027 643 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 CBLP22681 906 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 CCND2P30279 289 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 GNL1P36915 607 aaPredicted RBP3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 PRPHP41219 470 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 TMPOP42166 694 aaKnown RBP3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 MAGEB1P43366 347 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 RFX2P48378 723 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 RFX5P48382 616 aaPredicted RBP3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 PDX1P52945 283 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 MLLT10P55197 1068 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 CLDN15P56746 228 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 SLC26A5P58743 744 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 RPS18P62269 152 aaKnown RBP3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 KCNJ10P78508 379 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 GALK2Q01415 458 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 DSC1Q08554 894 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 TRAF2Q12933 501 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 RBBP7Q16576 425 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 PRTGQ2VWP7 1150 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 ANKDD1AQ495B1 522 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 ASPRV1Q53RT3 343 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 CCNYL2Q5T2Q4 361 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 FAM46CQ5VWP2 391 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 BTNL8Q6UX41 500 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 MCM10Q7L590 875 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 PTOV1Q86YD1 416 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 GPALPP1Q8IXQ4 340 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 BMPERQ8N8U9 685 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 L3MBTL4Q8NA19 623 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 NOA1Q8NC60 698 aaKnown RBP3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 ZNF540Q8NDQ6 660 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 RNASE8Q8TDE3 154 aaKnown RBP3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 VPS39Q96JC1 886 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 SPATA13Q96N96 652 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 PCYT2Q99447 389 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 NEURL2Q9BR09 285 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 VN1R1Q9GZP7 353 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 MIS12Q9H081 205 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 DDX47Q9H0S4 455 aaKnown RBP3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 DPH5Q9H2P9 285 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 TMEM245Q9H330 911 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 GPR173Q9NS66 373 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 HIF1ANQ9NWT6 349 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 SPHK1Q9NYA1 384 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 PKD2L2Q9NZM6 624 aa3.66□□□□□ -1.82
TRAPPC13-208ENST00000505553 UBQLN2Q9UHD9 624 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms