RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 GPR85P60893 370 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 IKZF1Q13422 519 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 PLA2G4EQ3MJ16 856 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 PCID2Q5JVF3 399 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 NAPEPLDQ6IQ20 393 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 GALNT5Q7Z7M9 940 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 VWA5B2Q8N398 1253 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 ZNF583Q96ND8 569 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 MRPL45Q9BRJ2 306 aaKnown RBP12.97□□□□□ -0.33
LETM1-203ENST00000505551 TTLL2Q9BWV7 592 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 GTPBP2Q9BX10 602 aaKnown RBP12.97□□□□□ -0.33
LETM1-203ENST00000505551 RIBC2Q9H4K1 309 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 TMEM39AQ9NV64 488 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 STOML2Q9UJZ1 356 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.97□□□□□ -0.33
LETM1-203ENST00000505551 TLR6Q9Y2C9 796 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 GMPPBQ9Y5P6 360 aa12.97□□□□□ -0.33
LETM1-203ENST00000505551 BPTFQ12830 3046 aa12.96□□□□□ -0.33
LETM1-203ENST00000505551 LOC100506127A0A0U1RQW1 187 aa12.96□□□□□ -0.33
LETM1-203ENST00000505551 CCDC182A6NF36 153 aa12.96□□□□□ -0.33
LETM1-203ENST00000505551 B4DXG7 233 aa12.96□□□□□ -0.33
LETM1-203ENST00000505551 PLD2O14939 933 aa12.96□□□□□ -0.33
LETM1-203ENST00000505551 TRIM3O75382 744 aaPredicted RBP12.96□□□□□ -0.33
LETM1-203ENST00000505551 CCNYL3P0C7X3 344 aa12.96□□□□□ -0.33
LETM1-203ENST00000505551 IGFBP6P24592 240 aaPredicted RBP12.96□□□□□ -0.33
LETM1-203ENST00000505551 ASAH1Q13510 395 aa12.96□□□□□ -0.33
LETM1-203ENST00000505551 MAJINQ3KP22 176 aa12.96□□□□□ -0.33
LETM1-203ENST00000505551 ARMCX4Q5H9R4 360 aa12.96□□□□□ -0.33
LETM1-203ENST00000505551 OR52E4Q8NGH9 312 aa12.96□□□□□ -0.33
LETM1-203ENST00000505551 SGK3Q96BR1 496 aa12.96□□□□□ -0.33
LETM1-203ENST00000505551 CEP19Q96LK0 163 aa12.96□□□□□ -0.33
LETM1-203ENST00000505551 KCNA7Q96RP8 456 aa12.96□□□□□ -0.33
LETM1-203ENST00000505551 SERINC2Q96SA4 455 aa12.96□□□□□ -0.33
LETM1-203ENST00000505551 SLC22A4Q9H015 551 aa12.96□□□□□ -0.33
LETM1-203ENST00000505551 OR51E2Q9H255 320 aa12.96□□□□□ -0.33
LETM1-203ENST00000505551 TNKS2Q9H2K2 1166 aa12.96□□□□□ -0.33
LETM1-203ENST00000505551 SDHAF3Q9NRP4 125 aa12.96□□□□□ -0.33
LETM1-203ENST00000505551 LIMD1Q9UGP4 676 aa12.96□□□□□ -0.33
LETM1-203ENST00000505551 MUTYHQ9UIF7 546 aa12.96□□□□□ -0.33
LETM1-203ENST00000505551 GJD2Q9UKL4 321 aa12.96□□□□□ -0.33
LETM1-203ENST00000505551 NDRG4Q9ULP0 352 aaKnown RBP12.96□□□□□ -0.33
LETM1-203ENST00000505551 SNX7Q9UNH6 387 aa12.96□□□□□ -0.33
LETM1-203ENST00000505551 PIN4Q9Y237 131 aaKnown RBP12.96□□□□□ -0.33
LETM1-203ENST00000505551 NEUROG3Q9Y4Z2 214 aa12.96□□□□□ -0.33
LETM1-203ENST00000505551 PCDHB5Q9Y5E4 795 aa12.96□□□□□ -0.33
LETM1-203ENST00000505551 V9GYH0 126 aa12.96□□□□□ -0.33
LETM1-203ENST00000505551 LAMA3Q16787 3333 aa12.96□□□□□ -0.34
LETM1-203ENST00000505551 AGRPO00253 132 aa12.96□□□□□ -0.34
LETM1-203ENST00000505551 DCLK1O15075 740 aa12.96□□□□□ -0.34
LETM1-203ENST00000505551 WBP4O75554 376 aaKnown RBP12.96□□□□□ -0.34
LETM1-203ENST00000505551 CYP4B1P13584 511 aa12.96□□□□□ -0.34
LETM1-203ENST00000505551 MSH3P20585 1137 aa12.96□□□□□ -0.34
LETM1-203ENST00000505551 SNRPD2P62316 118 aaKnown RBP12.96□□□□□ -0.34
LETM1-203ENST00000505551 BAK1Q16611 211 aa12.96□□□□□ -0.34
LETM1-203ENST00000505551 SOWAHAQ2M3V2 549 aa12.96□□□□□ -0.34
LETM1-203ENST00000505551 ESRP1Q6NXG1 681 aaKnown RBP12.96□□□□□ -0.34
LETM1-203ENST00000505551 SLC35F5Q8WV83 523 aa12.96□□□□□ -0.34
LETM1-203ENST00000505551 PPM1MQ96MI6 270 aa12.96□□□□□ -0.34
LETM1-203ENST00000505551 MCCC1Q96RQ3 725 aaPredicted RBP12.96□□□□□ -0.34
LETM1-203ENST00000505551 ZIC5Q96T25 663 aa12.96□□□□□ -0.34
LETM1-203ENST00000505551 FAM83DQ9H4H8 585 aa12.96□□□□□ -0.34
LETM1-203ENST00000505551 ALG9Q9H6U8 611 aa12.96□□□□□ -0.34
LETM1-203ENST00000505551 C3orf14Q9HBI5 128 aa12.96□□□□□ -0.34
LETM1-203ENST00000505551 ZIM2Q9NZV7 527 aa12.96□□□□□ -0.34
LETM1-203ENST00000505551 TRHDEQ9UKU6 1024 aa12.96□□□□□ -0.34
LETM1-203ENST00000505551 A0A1W2PQ09 198 aa12.95□□□□□ -0.34
LETM1-203ENST00000505551 E5RI56 91 aa12.95□□□□□ -0.34
LETM1-203ENST00000505551 GPR32O75388 356 aa12.95□□□□□ -0.34
LETM1-203ENST00000505551 CHMP24386 653 aa12.95□□□□□ -0.34
LETM1-203ENST00000505551 PROX2Q3B8N5 592 aa12.95□□□□□ -0.34
LETM1-203ENST00000505551 TIGD7Q6NT04 549 aaPredicted RBP12.95□□□□□ -0.34
LETM1-203ENST00000505551 SHQ1Q6PI26 577 aaKnown RBP12.95□□□□□ -0.34
LETM1-203ENST00000505551 FAM131BQ86XD5 332 aa12.95□□□□□ -0.34
LETM1-203ENST00000505551 ZFAND4Q86XD8 727 aa12.95□□□□□ -0.34
LETM1-203ENST00000505551 CYP4Z2PQ8N1L4 340 aa12.95□□□□□ -0.34
LETM1-203ENST00000505551 CLEC4CQ8WTT0 213 aa12.95□□□□□ -0.34
LETM1-203ENST00000505551 EMID1Q96A84 441 aaPredicted RBP12.95□□□□□ -0.34
LETM1-203ENST00000505551 NECTIN4Q96NY8 510 aa12.95□□□□□ -0.34
LETM1-203ENST00000505551 NFKBIZQ9BYH8 718 aa12.95□□□□□ -0.34
LETM1-203ENST00000505551 TMEM45AQ9NWC5 275 aa12.95□□□□□ -0.34
LETM1-203ENST00000505551 SLC23A1Q9UHI7 598 aa12.95□□□□□ -0.34
LETM1-203ENST00000505551 ADGRE2Q9UHX3 823 aa12.95□□□□□ -0.34
LETM1-203ENST00000505551 RECQL5O94762 991 aaPredicted RBP12.95□□□□□ -0.34
LETM1-203ENST00000505551 WISP3O95389 354 aaPredicted RBP12.95□□□□□ -0.34
LETM1-203ENST00000505551 RBP5P82980 135 aa12.95□□□□□ -0.34
LETM1-203ENST00000505551 ZNF124Q15973 351 aa12.95□□□□□ -0.34
LETM1-203ENST00000505551 FAM187BQ17R55 369 aa12.95□□□□□ -0.34
LETM1-203ENST00000505551 PPP1R26Q5T8A7 1209 aaPredicted RBP12.95□□□□□ -0.34
LETM1-203ENST00000505551 ZBTB37Q5TC79 503 aa12.95□□□□□ -0.34
LETM1-203ENST00000505551 TSPYL5Q86VY4 417 aaPredicted RBP12.95□□□□□ -0.34
LETM1-203ENST00000505551 KLHDC8BQ8IXV7 354 aa12.95□□□□□ -0.34
LETM1-203ENST00000505551 ZNF557Q8N988 423 aaPredicted RBP12.95□□□□□ -0.34
LETM1-203ENST00000505551 ZNF548Q8NEK5 533 aaPredicted RBP12.95□□□□□ -0.34
LETM1-203ENST00000505551 OR6B3Q8NGW1 331 aa12.95□□□□□ -0.34
LETM1-203ENST00000505551 ASB15Q8WXK1 588 aa12.95□□□□□ -0.34
LETM1-203ENST00000505551 FRMD6Q96NE9 622 aa12.95□□□□□ -0.34
LETM1-203ENST00000505551 SECISBP2Q96T21 854 aaKnown RBP12.95□□□□□ -0.34
LETM1-203ENST00000505551 USB1Q9BQ65 265 aaKnown RBP12.95□□□□□ -0.34
LETM1-203ENST00000505551 MAGIXQ9H6Y5 334 aa12.95□□□□□ -0.34
LETM1-203ENST00000505551 IFT22Q9H7X7 185 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms