RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 ATP5J2P56134 94 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 POLR2GP62487 172 aaKnown RBP eCLIP5.04□□□□□ -1.6
NIPBL-204ENST00000504430 BNC1Q01954 994 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 ROR2Q01974 943 aaKnown RBP5.04□□□□□ -1.6
NIPBL-204ENST00000504430 CYLC2Q14093 348 aaPredicted RBP5.04□□□□□ -1.6
NIPBL-204ENST00000504430 TGFBIQ15582 683 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 EXT1Q16394 746 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 KYAT3Q6YP21 454 aaKnown RBP5.04□□□□□ -1.6
NIPBL-204ENST00000504430 SLC35F3Q8IY50 421 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 BCORP1Q8N888 145 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 EXD1Q8NHP7 514 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 GRHL3Q8TE85 626 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 RAD54LQ92698 747 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 MYADMQ96S97 322 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 MNTQ99583 582 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 ACBD6Q9BR61 282 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 C9orf16Q9BUW7 83 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 DPEP3Q9H4B8 488 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 MYNNQ9NPC7 610 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 STEAP1Q9UHE8 339 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 TBC1D24Q9ULP9 559 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 TNNQ9UQP3 1299 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 DRGXA6NNA5 263 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 DSCR3O14972 297 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 STRNO43815 780 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 CCNT1O60563 726 aaKnown RBP5.04□□□□□ -1.6
NIPBL-204ENST00000504430 ATP9AO75110 1047 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 SLC25A12O75746 678 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 AGTP01019 485 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 CHRNGP07510 517 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 RETP07949 1114 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 NR2F6P10588 404 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 MPZP25189 248 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 GSTM2P28161 218 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 EGR4Q05215 589 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 SPOCK1Q08629 439 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 TNK1Q13470 666 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 ELAVL3Q14576 367 aaKnown RBP5.04□□□□□ -1.6
NIPBL-204ENST00000504430 KRT31Q15323 416 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 SPANXN2Q5MJ10 180 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 RNLSQ5VYX0 342 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 ZC3H18Q86VM9 953 aaKnown RBP5.04□□□□□ -1.6
NIPBL-204ENST00000504430 FOXP4Q8IVH2 680 aaPredicted RBP5.04□□□□□ -1.6
NIPBL-204ENST00000504430 OR5D13Q8NGL4 314 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 RPL3LQ92901 407 aaKnown RBP5.04□□□□□ -1.6
NIPBL-204ENST00000504430 RAB40CQ96S21 281 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 DCLRE1CQ96SD1 692 aaKnown RBP5.04□□□□□ -1.6
NIPBL-204ENST00000504430 SHCBP1LQ9BZQ2 653 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 UCK1Q9HA47 277 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 C19orf73Q9NVV2 129 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 FKBP14Q9NWM8 211 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 CD300AQ9UGN4 299 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 RBMX2Q9Y388 322 aaKnown RBP5.04□□□□□ -1.6
NIPBL-204ENST00000504430 RNF115Q9Y4L5 304 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 TTC21AQ8NDW8 1320 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 SALL1Q9NSC2 1324 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 UBE2Q2LH0YL09 131 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 SRGAP3O43295 1099 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 STAG3L1P0CL83 205 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 FCGR2AP12318 317 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 ARL4AP40617 200 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 ADAM8P78325 824 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 PDE1BQ01064 536 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 HSF2Q03933 536 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 GK2Q14410 553 aaPredicted RBP5.04□□□□□ -1.6
NIPBL-204ENST00000504430 DMC1Q14565 340 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 PCK2Q16822 640 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 FAM83EQ2M2I3 478 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 TMEM119Q4V9L6 283 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 PRAMEF5Q5TYX0 476 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 PRAMEF6Q5VXH4 476 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 NAIF1Q69YI7 327 aaPredicted RBP5.04□□□□□ -1.6
NIPBL-204ENST00000504430 PYHIN1Q6K0P9 492 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 FBXO42Q6P3S6 717 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 ACSM6Q6P461 480 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 TRMT10BQ6PF06 316 aaKnown RBP5.04□□□□□ -1.6
NIPBL-204ENST00000504430 TMEM220Q6QAJ8 160 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 GPR180Q86V85 440 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 VRK2Q86Y07 508 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 ECHDC2Q86YB7 292 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 C12orf56Q8IXR9 622 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 B4GALNT2Q8NHY0 566 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 GLG1Q92896 1179 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 LENG1Q96BZ8 264 aaPredicted RBP5.04□□□□□ -1.6
NIPBL-204ENST00000504430 STAMBPL1Q96FJ0 436 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 DDOQ99489 341 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 FAM110AQ9BQ89 295 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 H2AFJQ9BTM1 129 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 TEKT3Q9BXF9 490 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 SPATC1LQ9H0A9 340 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 CUEDC2Q9H467 287 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 LZTFL1Q9NQ48 299 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 AAR2Q9Y312 384 aaKnown RBP5.04□□□□□ -1.6
NIPBL-204ENST00000504430 LSM4Q9Y4Z0 139 aaKnown RBP5.04□□□□□ -1.6
NIPBL-204ENST00000504430 DMRT1Q9Y5R6 373 aa5.04□□□□□ -1.6
NIPBL-204ENST00000504430 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.03□□□□□ -1.6
NIPBL-204ENST00000504430 GRID2O43424 1007 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 HCRTR2O43614 444 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 GMNNO75496 209 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 CAVIN2O95810 425 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms