RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 PRPF4O43172 522 aaKnown RBP eCLIP16.12■□□□□ 0.17
TRAPPC3-207ENST00000497251 PRICKLE3O43900 615 aaPredicted RBP16.12■□□□□ 0.17
TRAPPC3-207ENST00000497251 USP1O94782 785 aa16.12■□□□□ 0.17
TRAPPC3-207ENST00000497251 HPP00738 406 aa16.12■□□□□ 0.17
TRAPPC3-207ENST00000497251 CTSBP07858 339 aa16.12■□□□□ 0.17
TRAPPC3-207ENST00000497251 GRB7Q14451 532 aa16.12■□□□□ 0.17
TRAPPC3-207ENST00000497251 INAQ16352 499 aa16.12■□□□□ 0.17
TRAPPC3-207ENST00000497251 ARMC3Q5W041 872 aa16.12■□□□□ 0.17
TRAPPC3-207ENST00000497251 ZNF534Q76KX8 674 aa16.12■□□□□ 0.17
TRAPPC3-207ENST00000497251 PPHLN1Q8NEY8 458 aaKnown RBP16.12■□□□□ 0.17
TRAPPC3-207ENST00000497251 OR11G2Q8NGC1 345 aa16.12■□□□□ 0.17
TRAPPC3-207ENST00000497251 MVB12AQ96EY5 273 aa16.12■□□□□ 0.17
TRAPPC3-207ENST00000497251 HES6Q96HZ4 224 aa16.12■□□□□ 0.17
TRAPPC3-207ENST00000497251 RUBCNLQ9H714 662 aa16.12■□□□□ 0.17
TRAPPC3-207ENST00000497251 ETNK1Q9HBU6 452 aa16.12■□□□□ 0.17
TRAPPC3-207ENST00000497251 CATSPERZQ9NTU4 200 aa16.12■□□□□ 0.17
TRAPPC3-207ENST00000497251 UTP6Q9NYH9 597 aaKnown RBP16.12■□□□□ 0.17
TRAPPC3-207ENST00000497251 ZNF282Q9UDV7 671 aaPredicted RBP16.12■□□□□ 0.17
TRAPPC3-207ENST00000497251 GNPTGQ9UJJ9 305 aa16.12■□□□□ 0.17
TRAPPC3-207ENST00000497251 TCAF1Q9Y4C2 921 aa16.12■□□□□ 0.17
TRAPPC3-207ENST00000497251 HYKKA2RU49 373 aa16.11■□□□□ 0.17
TRAPPC3-207ENST00000497251 MYBL2P10244 700 aa16.11■□□□□ 0.17
TRAPPC3-207ENST00000497251 RPS3P23396 243 aaKnown RBP eCLIP16.11■□□□□ 0.17
TRAPPC3-207ENST00000497251 GRIA3P42263 894 aa16.11■□□□□ 0.17
TRAPPC3-207ENST00000497251 CDC16Q13042 620 aa16.11■□□□□ 0.17
TRAPPC3-207ENST00000497251 MFAP5Q13361 173 aa16.11■□□□□ 0.17
TRAPPC3-207ENST00000497251 OASLQ15646 514 aaKnown RBP16.11■□□□□ 0.17
TRAPPC3-207ENST00000497251 MUM1Q2TAK8 710 aa16.11■□□□□ 0.17
TRAPPC3-207ENST00000497251 PCID2Q5JVF3 399 aa16.11■□□□□ 0.17
TRAPPC3-207ENST00000497251 WASHC2DQ5SRD0 308 aa16.11■□□□□ 0.17
TRAPPC3-207ENST00000497251 PTRHD1Q6GMV3 140 aaKnown RBP16.11■□□□□ 0.17
TRAPPC3-207ENST00000497251 NAPRTQ6XQN6 538 aa16.11■□□□□ 0.17
TRAPPC3-207ENST00000497251 COX15Q7KZN9 410 aa16.11■□□□□ 0.17
TRAPPC3-207ENST00000497251 VRK3Q8IV63 474 aa16.11■□□□□ 0.17
TRAPPC3-207ENST00000497251 RNF10Q8N5U6 811 aaKnown RBP16.11■□□□□ 0.17
TRAPPC3-207ENST00000497251 BCORP1Q8N888 145 aa16.11■□□□□ 0.17
TRAPPC3-207ENST00000497251 CFAP61Q8NHU2 1237 aa16.11■□□□□ 0.17
TRAPPC3-207ENST00000497251 CRB3Q9BUF7 120 aa16.11■□□□□ 0.17
TRAPPC3-207ENST00000497251 TSGA10Q9BZW7 698 aa16.11■□□□□ 0.17
TRAPPC3-207ENST00000497251 ZBTB20Q9HC78 741 aaPredicted RBP16.11■□□□□ 0.17
TRAPPC3-207ENST00000497251 ZNF304Q9HCX3 659 aa16.11■□□□□ 0.17
TRAPPC3-207ENST00000497251 PIH1D1Q9NWS0 290 aaKnown RBP16.11■□□□□ 0.17
TRAPPC3-207ENST00000497251 PAK5Q9P286 719 aa16.11■□□□□ 0.17
TRAPPC3-207ENST00000497251 NTNG1Q9Y2I2 539 aa16.11■□□□□ 0.17
TRAPPC3-207ENST00000497251 R3HDM2Q9Y2K5 976 aaKnown RBP16.11■□□□□ 0.17
TRAPPC3-207ENST00000497251 NUP210LQ5VU65 1888 aa16.11■□□□□ 0.17
TRAPPC3-207ENST00000497251 IGLV3-12A0A075B6K2 115 aa16.1■□□□□ 0.17
TRAPPC3-207ENST00000497251 A0A1W2PQ72 361 aa16.1■□□□□ 0.17
TRAPPC3-207ENST00000497251 H3BMM5 538 aa16.1■□□□□ 0.17
TRAPPC3-207ENST00000497251 LIASO43766 372 aa16.1■□□□□ 0.17
TRAPPC3-207ENST00000497251 ACPPP15309 386 aa16.1■□□□□ 0.17
TRAPPC3-207ENST00000497251 ATP5DP30049 168 aa16.1■□□□□ 0.17
TRAPPC3-207ENST00000497251 HSD17B2P37059 387 aa16.1■□□□□ 0.17
TRAPPC3-207ENST00000497251 CSE1LP55060 971 aaKnown RBP16.1■□□□□ 0.17
TRAPPC3-207ENST00000497251 RELAQ04206 551 aa16.1■□□□□ 0.17
TRAPPC3-207ENST00000497251 HIF1AQ16665 826 aa16.1■□□□□ 0.17
TRAPPC3-207ENST00000497251 ZNF787Q6DD87 383 aa16.1■□□□□ 0.17
TRAPPC3-207ENST00000497251 FAM180AQ6UWF9 173 aa16.1■□□□□ 0.17
TRAPPC3-207ENST00000497251 OTOAQ7RTW8 1153 aa16.1■□□□□ 0.17
TRAPPC3-207ENST00000497251 GRHL3Q8TE85 626 aa16.1■□□□□ 0.17
TRAPPC3-207ENST00000497251 MIEF2Q96C03 454 aa16.1■□□□□ 0.17
TRAPPC3-207ENST00000497251 THOC3Q96J01 351 aaKnown RBP16.1■□□□□ 0.17
TRAPPC3-207ENST00000497251 TRIM56Q9BRZ2 755 aaKnown RBP16.1■□□□□ 0.17
TRAPPC3-207ENST00000497251 IL22Q9GZX6 179 aa16.1■□□□□ 0.17
TRAPPC3-207ENST00000497251 EIF2B3Q9NR50 452 aaKnown RBP16.1■□□□□ 0.17
TRAPPC3-207ENST00000497251 RAB6BQ9NRW1 208 aa16.1■□□□□ 0.17
TRAPPC3-207ENST00000497251 SPATA7Q9P0W8 599 aa16.1■□□□□ 0.17
TRAPPC3-207ENST00000497251 SLC2A6Q9UGQ3 507 aa16.1■□□□□ 0.17
TRAPPC3-207ENST00000497251 ZNF148Q9UQR1 794 aa16.1■□□□□ 0.17
TRAPPC3-207ENST00000497251 ENTPD4Q9Y227 616 aa16.1■□□□□ 0.17
TRAPPC3-207ENST00000497251 DYTNA2CJ06 578 aa16.09■□□□□ 0.17
TRAPPC3-207ENST00000497251 MAP2K7O14733 419 aa16.09■□□□□ 0.17
TRAPPC3-207ENST00000497251 CD3EAPO15446 510 aaKnown RBP16.09■□□□□ 0.17
TRAPPC3-207ENST00000497251 HNRNPRO43390 633 aaKnown RBP16.09■□□□□ 0.17
TRAPPC3-207ENST00000497251 C1orf105O95561 183 aa16.09■□□□□ 0.17
TRAPPC3-207ENST00000497251 IFNB1P01574 187 aa16.09■□□□□ 0.17
TRAPPC3-207ENST00000497251 STSP08842 583 aa16.09■□□□□ 0.17
TRAPPC3-207ENST00000497251 ZGLP1P0C6A0 271 aa16.09■□□□□ 0.17
TRAPPC3-207ENST00000497251 ICAM2P13598 275 aa16.09■□□□□ 0.17
TRAPPC3-207ENST00000497251 ARHGAP19Q14CB8 494 aa16.09■□□□□ 0.17
TRAPPC3-207ENST00000497251 RNF187Q5TA31 235 aaPredicted RBP16.09■□□□□ 0.17
TRAPPC3-207ENST00000497251 SEL1L2Q5TEA6 688 aa16.09■□□□□ 0.17
TRAPPC3-207ENST00000497251 GARNL3Q5VVW2 1013 aa16.09■□□□□ 0.17
TRAPPC3-207ENST00000497251 ATG9BQ674R7 924 aa16.09■□□□□ 0.17
TRAPPC3-207ENST00000497251 RIPOR1Q6ZS17 1223 aa16.09■□□□□ 0.17
TRAPPC3-207ENST00000497251 RNF44Q7L0R7 432 aa16.09■□□□□ 0.17
TRAPPC3-207ENST00000497251 NDUFAF7Q7L592 441 aa16.09■□□□□ 0.17
TRAPPC3-207ENST00000497251 SDCCAG8Q86SQ7 713 aaPredicted RBP16.09■□□□□ 0.17
TRAPPC3-207ENST00000497251 PARP9Q8IXQ6 854 aa16.09■□□□□ 0.17
TRAPPC3-207ENST00000497251 KBTBD2Q8IY47 623 aa16.09■□□□□ 0.17
TRAPPC3-207ENST00000497251 CCDC89Q8N998 374 aa16.09■□□□□ 0.17
TRAPPC3-207ENST00000497251 OR2L3Q8NG85 312 aa16.09■□□□□ 0.17
TRAPPC3-207ENST00000497251 STT3BQ8TCJ2 826 aa16.09■□□□□ 0.17
TRAPPC3-207ENST00000497251 TCF12Q99081 682 aa16.09■□□□□ 0.17
TRAPPC3-207ENST00000497251 SLX1AQ9BQ83 275 aa16.09■□□□□ 0.17
TRAPPC3-207ENST00000497251 P2RY12Q9H244 342 aa16.09■□□□□ 0.17
TRAPPC3-207ENST00000497251 CTSFQ9UBX1 484 aa16.09■□□□□ 0.17
TRAPPC3-207ENST00000497251 TTC7AQ9ULT0 858 aaPredicted RBP16.09■□□□□ 0.17
TRAPPC3-207ENST00000497251 DRG1Q9Y295 367 aaKnown RBP16.09■□□□□ 0.17
TRAPPC3-207ENST00000497251 KLHL20Q9Y2M5 609 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms