RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 ZNF578Q96N58 590 aaPredicted RBP18.72■□□□□ 0.59
HDAC4-212ENST00000495497 TRIM54Q9BYV2 358 aa18.72■□□□□ 0.59
HDAC4-212ENST00000495497 VPS11Q9H270 941 aa18.72■□□□□ 0.59
HDAC4-212ENST00000495497 PDE7BQ9NP56 450 aa18.72■□□□□ 0.59
HDAC4-212ENST00000495497 THSD1Q9NS62 852 aa18.72■□□□□ 0.59
HDAC4-212ENST00000495497 TAC3Q9UHF0 121 aa18.72■□□□□ 0.59
HDAC4-212ENST00000495497 TLK1Q9UKI8 766 aa18.72■□□□□ 0.59
HDAC4-212ENST00000495497 RAB21Q9UL25 225 aa18.72■□□□□ 0.59
HDAC4-212ENST00000495497 OARD1Q9Y530 152 aa18.72■□□□□ 0.59
HDAC4-212ENST00000495497 PCDHB11Q9Y5F2 797 aa18.72■□□□□ 0.59
HDAC4-212ENST00000495497 A0A087X1B8 175 aa18.71■□□□□ 0.59
HDAC4-212ENST00000495497 NCF1BA6NI72 391 aaPredicted RBP18.71■□□□□ 0.59
HDAC4-212ENST00000495497 NCF1CA8MVU1 366 aaPredicted RBP18.71■□□□□ 0.59
HDAC4-212ENST00000495497 NRP2O60462 931 aa18.71■□□□□ 0.59
HDAC4-212ENST00000495497 LTA4HP09960 611 aaKnown RBP18.71■□□□□ 0.59
HDAC4-212ENST00000495497 NCF1P14598 390 aaPredicted RBP18.71■□□□□ 0.59
HDAC4-212ENST00000495497 GRIA3P42263 894 aa18.71■□□□□ 0.59
HDAC4-212ENST00000495497 KCNC1P48547 511 aa18.71■□□□□ 0.59
HDAC4-212ENST00000495497 AP1S2P56377 157 aa18.71■□□□□ 0.59
HDAC4-212ENST00000495497 ATP6V0D1P61421 351 aa18.71■□□□□ 0.59
HDAC4-212ENST00000495497 TBPL1P62380 186 aa18.71■□□□□ 0.59
HDAC4-212ENST00000495497 DEFB110Q30KQ9 67 aa18.71■□□□□ 0.59
HDAC4-212ENST00000495497 C18orf21Q32NC0 220 aaPredicted RBP18.71■□□□□ 0.59
HDAC4-212ENST00000495497 TMTC4Q5T4D3 741 aa18.71■□□□□ 0.59
HDAC4-212ENST00000495497 DCAF12Q5T6F0 453 aa18.71■□□□□ 0.59
HDAC4-212ENST00000495497 THEMIS2Q5TEJ8 643 aa18.71■□□□□ 0.59
HDAC4-212ENST00000495497 EMBQ6PCB8 327 aa18.71■□□□□ 0.59
HDAC4-212ENST00000495497 FIGLAQ6QHK4 219 aa18.71■□□□□ 0.59
HDAC4-212ENST00000495497 FRA10AC1Q70Z53 315 aa18.71■□□□□ 0.59
HDAC4-212ENST00000495497 CLEC14AQ86T13 490 aa18.71■□□□□ 0.59
HDAC4-212ENST00000495497 ADAMTSL2Q86TH1 951 aa18.71■□□□□ 0.59
HDAC4-212ENST00000495497 ZFAND4Q86XD8 727 aa18.71■□□□□ 0.59
HDAC4-212ENST00000495497 OR2W6PQ8NHA6 318 aa18.71■□□□□ 0.59
HDAC4-212ENST00000495497 CCDC77Q9BR77 488 aa18.71■□□□□ 0.59
HDAC4-212ENST00000495497 ALG9Q9H6U8 611 aa18.71■□□□□ 0.59
HDAC4-212ENST00000495497 DKK4Q9UBT3 224 aa18.71■□□□□ 0.59
HDAC4-212ENST00000495497 TBK1Q9UHD2 729 aa18.71■□□□□ 0.59
HDAC4-212ENST00000495497 SMIM23A6NLE4 172 aa18.7■□□□□ 0.58
HDAC4-212ENST00000495497 NVLO15381 856 aaKnown RBP18.7■□□□□ 0.58
HDAC4-212ENST00000495497 CTSBP07858 339 aa18.7■□□□□ 0.58
HDAC4-212ENST00000495497 SNRPAP09012 282 aaKnown RBP18.7■□□□□ 0.58
HDAC4-212ENST00000495497 TFEBP19484 476 aa18.7■□□□□ 0.58
HDAC4-212ENST00000495497 CNTFP26441 200 aa18.7■□□□□ 0.58
HDAC4-212ENST00000495497 MAGEA12P43365 314 aa18.7■□□□□ 0.58
HDAC4-212ENST00000495497 SLCO1A2P46721 670 aa18.7■□□□□ 0.58
HDAC4-212ENST00000495497 GLRBP48167 497 aa18.7■□□□□ 0.58
HDAC4-212ENST00000495497 RAB15P59190 212 aa18.7■□□□□ 0.58
HDAC4-212ENST00000495497 ERVPABLB-1P60509 514 aa18.7■□□□□ 0.58
HDAC4-212ENST00000495497 ACY1Q03154 408 aa18.7■□□□□ 0.58
HDAC4-212ENST00000495497 COL9A2Q14055 689 aaPredicted RBP18.7■□□□□ 0.58
HDAC4-212ENST00000495497 TAF1BQ53T94 588 aaPredicted RBP18.7■□□□□ 0.58
HDAC4-212ENST00000495497 TMEM164Q5U3C3 297 aa18.7■□□□□ 0.58
HDAC4-212ENST00000495497 CEACAM20Q6UY09 585 aa18.7■□□□□ 0.58
HDAC4-212ENST00000495497 PLD6Q8N2A8 252 aaKnown RBP18.7■□□□□ 0.58
HDAC4-212ENST00000495497 FGF11Q92914 225 aa18.7■□□□□ 0.58
HDAC4-212ENST00000495497 EXT2Q93063 718 aa18.7■□□□□ 0.58
HDAC4-212ENST00000495497 CAVIN3Q969G5 261 aa18.7■□□□□ 0.58
HDAC4-212ENST00000495497 ISL2Q96A47 359 aa18.7■□□□□ 0.58
HDAC4-212ENST00000495497 PYCR2Q96C36 320 aa18.7■□□□□ 0.58
HDAC4-212ENST00000495497 FBXL8Q96CD0 374 aa18.7■□□□□ 0.58
HDAC4-212ENST00000495497 ZNF501Q96CX3 271 aaPredicted RBP18.7■□□□□ 0.58
HDAC4-212ENST00000495497 TCTN2Q96GX1 697 aa18.7■□□□□ 0.58
HDAC4-212ENST00000495497 NAF1Q96HR8 494 aaKnown RBP18.7■□□□□ 0.58
HDAC4-212ENST00000495497 EGFL8Q99944 293 aa18.7■□□□□ 0.58
HDAC4-212ENST00000495497 DDA1Q9BW61 102 aa18.7■□□□□ 0.58
HDAC4-212ENST00000495497 NMRAL1Q9HBL8 299 aa18.7■□□□□ 0.58
HDAC4-212ENST00000495497 SLC6A20Q9NP91 592 aa18.7■□□□□ 0.58
HDAC4-212ENST00000495497 MRPS30Q9NP92 439 aaKnown RBP18.7■□□□□ 0.58
HDAC4-212ENST00000495497 CCDC177Q9NQR7 707 aaPredicted RBP18.7■□□□□ 0.58
HDAC4-212ENST00000495497 FGF21Q9NSA1 209 aa18.7■□□□□ 0.58
HDAC4-212ENST00000495497 ZNF358Q9NW07 568 aa18.7■□□□□ 0.58
HDAC4-212ENST00000495497 PSMC3IPQ9P2W1 217 aaPredicted RBP18.7■□□□□ 0.58
HDAC4-212ENST00000495497 RAXQ9Y2V3 346 aa18.7■□□□□ 0.58
HDAC4-212ENST00000495497 PCDHGA7Q9Y5G6 932 aa18.7■□□□□ 0.58
HDAC4-212ENST00000495497 FREM2Q5SZK8 3169 aa18.69■□□□□ 0.58
HDAC4-212ENST00000495497 FOXO6A8MYZ6 492 aa18.69■□□□□ 0.58
HDAC4-212ENST00000495497 TMEM150CB9EJG8 249 aa18.69■□□□□ 0.58
HDAC4-212ENST00000495497 KRT37O76014 449 aa18.69■□□□□ 0.58
HDAC4-212ENST00000495497 TIAF1O95411 115 aa18.69■□□□□ 0.58
HDAC4-212ENST00000495497 FGF5P12034 268 aa18.69■□□□□ 0.58
HDAC4-212ENST00000495497 ZNF28P17035 718 aa18.69■□□□□ 0.58
HDAC4-212ENST00000495497 CMPK1P30085 196 aa18.69■□□□□ 0.58
HDAC4-212ENST00000495497 SLC26A3P40879 764 aa18.69■□□□□ 0.58
HDAC4-212ENST00000495497 GABRA4P48169 554 aa18.69■□□□□ 0.58
HDAC4-212ENST00000495497 TGFBIQ15582 683 aa18.69■□□□□ 0.58
HDAC4-212ENST00000495497 FBXO48Q5FWF7 155 aa18.69■□□□□ 0.58
HDAC4-212ENST00000495497 ICE2Q659A1 982 aa18.69■□□□□ 0.58
HDAC4-212ENST00000495497 ISCA2Q86U28 154 aa18.69■□□□□ 0.58
HDAC4-212ENST00000495497 GPSM1Q86YR5 675 aa18.69■□□□□ 0.58
HDAC4-212ENST00000495497 OR1L3Q8NH93 324 aa18.69■□□□□ 0.58
HDAC4-212ENST00000495497 EPS8L3Q8TE67 593 aaKnown RBP18.69■□□□□ 0.58
HDAC4-212ENST00000495497 KIAA1191Q96A73 305 aa18.69■□□□□ 0.58
HDAC4-212ENST00000495497 DPH7Q9BTV6 452 aa18.69■□□□□ 0.58
HDAC4-212ENST00000495497 INTS7Q9NVH2 962 aaKnown RBP18.69■□□□□ 0.58
HDAC4-212ENST00000495497 CUEDC1Q9NWM3 386 aaPredicted RBP18.69■□□□□ 0.58
HDAC4-212ENST00000495497 FETUBQ9UGM5 382 aa18.69■□□□□ 0.58
HDAC4-212ENST00000495497 RARRES3Q9UL19 164 aa18.69■□□□□ 0.58
HDAC4-212ENST00000495497 RNF112Q9ULX5 631 aa18.69■□□□□ 0.58
HDAC4-212ENST00000495497 SH2B3Q9UQQ2 575 aa18.69■□□□□ 0.58
HDAC4-212ENST00000495497 PCDHGA3Q9Y5H0 932 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms