RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 SLC13A3Q8WWT9 602 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 COQ8BQ96D53 544 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 FOPNLQ96NB1 174 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 BARHL1Q9BZE3 327 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 CCDC90BQ9GZT6 254 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 TUBB1Q9H4B7 451 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 PPP1R3EQ9H7J1 279 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 C14orf119Q9NWQ9 140 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 NDRG3Q9UGV2 375 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 RIMKLBQ9ULI2 386 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 VPS9D1Q9Y2B5 631 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 MAN2B2Q9Y2E5 1009 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 LSM2Q9Y333 95 aaKnown RBP4.68□□□□□ -1.66
PRKD3-210ENST00000494667 HSPB11Q9Y547 144 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 MAGED1Q9Y5V3 778 aaPredicted RBP4.68□□□□□ -1.66
PRKD3-210ENST00000494667 SMCHD1A6NHR9 2005 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 PPP6CO00743 305 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 AZIN1O14977 448 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 ORC5O43913 435 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 KIAA0513O60268 411 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 SLC22A3O75751 556 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 IFNA4P05014 189 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 HOXA13P31271 388 aaPredicted RBP4.68□□□□□ -1.66
PRKD3-210ENST00000494667 FMO3P31513 532 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 GGT2P36268 569 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 ARL2P36404 184 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 MAP2K6P52564 334 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 SNX16P57768 344 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 CRADDP78560 199 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 ABATP80404 500 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 DSG2Q14126 1118 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 SF3A2Q15428 464 aaKnown RBP4.68□□□□□ -1.66
PRKD3-210ENST00000494667 PFKFB4Q16877 469 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 SEZ6Q53EL9 994 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 IGSF11Q5DX21 431 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 FAM26DQ5JW98 314 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 FAM102AQ5T9C2 384 aaPredicted RBP4.68□□□□□ -1.66
PRKD3-210ENST00000494667 LCN1P1Q5VSP4 162 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 CD276Q5ZPR3 534 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 MZT2BQ6NZ67 158 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 PKN3Q6P5Z2 889 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 ALKAL1Q6UXT8 129 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 BBS7Q8IWZ6 715 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 UCN3Q969E3 161 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 MSANTD3Q96H12 275 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 RBP7Q96R05 134 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 APOL2Q9BQE5 337 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 CEP41Q9BYV8 373 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 GSX2Q9BZM3 304 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 MIXL1Q9H2W2 232 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 QTRT2Q9H974 415 aaKnown RBP4.68□□□□□ -1.66
PRKD3-210ENST00000494667 FBRSL1Q9HCM7 1045 aaKnown RBP4.68□□□□□ -1.66
PRKD3-210ENST00000494667 FZD3Q9NPG1 666 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 ZC4H2Q9NQZ6 224 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 ACSS2Q9NR19 701 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 ERVK13-1Q9NX77 482 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 TMCC3Q9ULS5 477 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 CDH10Q9Y6N8 788 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 MIA3Q5JRA6 1907 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 DCLK1O15075 740 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 INPPL1O15357 1258 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 HUS1O60921 280 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 PMPCBO75439 489 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 GPX5O75715 221 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 LALBAP00709 142 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 CST3P01034 146 aaPredicted RBP4.68□□□□□ -1.66
PRKD3-210ENST00000494667 SCG5P05408 212 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 HNRNPLP14866 589 aaKnown RBP eCLIP4.68□□□□□ -1.666e-6■■■□□ 18.4
PRKD3-210ENST00000494667 ARSBP15848 533 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 ITPKAP23677 461 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 DNAJA1P31689 397 aaKnown RBP4.68□□□□□ -1.66
PRKD3-210ENST00000494667 RORCP51449 518 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 SLC6A3Q01959 620 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 HSF2Q03933 536 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 GRB7Q14451 532 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 RUNDC3AQ59EK9 446 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 PCID2Q5JVF3 399 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 RGS7BPQ6MZT1 257 aaPredicted RBP4.68□□□□□ -1.66
PRKD3-210ENST00000494667 ZSWIM9Q86XI8 627 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 CLEC10AQ8IUN9 316 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 SLC41A1Q8IVJ1 513 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 MCATQ8IVS2 390 aaKnown RBP4.68□□□□□ -1.66
PRKD3-210ENST00000494667 STPG2Q8N412 459 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 GRAPLQ8TC17 118 aaPredicted RBP4.68□□□□□ -1.66
PRKD3-210ENST00000494667 GPR151Q8TDV0 419 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 DNASE1L2Q92874 299 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 SLC25A46Q96AG3 418 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 SCMH1Q96GD3 660 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 OR5M11Q96RB7 305 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 SEPHS2Q99611 448 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 EPYCQ99645 322 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 NPAS1Q99742 590 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 COPS4Q9BT78 406 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 MLPHQ9BV36 600 aaPredicted RBP4.68□□□□□ -1.66
PRKD3-210ENST00000494667 MIR1-1HGQ9H1L0 117 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 MMP28Q9H239 520 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 LTB4R2Q9NPC1 389 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 SETD4Q9NVD3 440 aa4.68□□□□□ -1.66
PRKD3-210ENST00000494667 PRMT7Q9NVM4 692 aaPredicted RBP4.68□□□□□ -1.66
PRKD3-210ENST00000494667 SPASTQ9UBP0 616 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms