RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 IMPDH1P20839 514 aa11.16□□□□□ -0.62
LSM2-214ENST00000493387 PRDX3P30048 256 aaKnown RBP11.16□□□□□ -0.62
LSM2-214ENST00000493387 CMPK1P30085 196 aa11.16□□□□□ -0.62
LSM2-214ENST00000493387 ETV4P43268 484 aa11.16□□□□□ -0.62
LSM2-214ENST00000493387 SLC6A12P48065 614 aa11.16□□□□□ -0.62
LSM2-214ENST00000493387 HSPA7P48741 367 aa11.16□□□□□ -0.62
LSM2-214ENST00000493387 TBPL1P62380 186 aa11.16□□□□□ -0.62
LSM2-214ENST00000493387 HERVK_113P63132 956 aa11.16□□□□□ -0.62
LSM2-214ENST00000493387 SPIDRQ14159 915 aa11.16□□□□□ -0.62
LSM2-214ENST00000493387 FASTKQ14296 549 aaKnown RBP11.16□□□□□ -0.62
LSM2-214ENST00000493387 SF1Q15637 639 aaKnown RBP11.16□□□□□ -0.62
LSM2-214ENST00000493387 RSPO4Q2I0M5 234 aaPredicted RBP11.16□□□□□ -0.62
LSM2-214ENST00000493387 HHATQ5VTY9 493 aa11.16□□□□□ -0.62
LSM2-214ENST00000493387 PRAMEF13Q5VWM6 474 aa11.16□□□□□ -0.62
LSM2-214ENST00000493387 NKAIN2Q5VXU1 208 aa11.16□□□□□ -0.62
LSM2-214ENST00000493387 IRGCQ6NXR0 463 aa11.16□□□□□ -0.62
LSM2-214ENST00000493387 LCTLQ6UWM7 567 aa11.16□□□□□ -0.62
LSM2-214ENST00000493387 USP53Q70EK8 1073 aa11.16□□□□□ -0.62
LSM2-214ENST00000493387 THOC6Q86W42 341 aaKnown RBP11.16□□□□□ -0.62
LSM2-214ENST00000493387 C2orf73Q8N5S3 287 aaPredicted RBP11.16□□□□□ -0.62
LSM2-214ENST00000493387 LMNTD1Q8N9Z9 388 aa11.16□□□□□ -0.62
LSM2-214ENST00000493387 OR4D9Q8NGE8 314 aa11.16□□□□□ -0.62
LSM2-214ENST00000493387 RSC1A1Q92681 617 aa11.16□□□□□ -0.62
LSM2-214ENST00000493387 PHF21BQ96EK2 531 aa11.16□□□□□ -0.62
LSM2-214ENST00000493387 SELENOSQ9BQE4 189 aa11.16□□□□□ -0.62
LSM2-214ENST00000493387 C1QTNF3Q9BXJ4 246 aa11.16□□□□□ -0.62
LSM2-214ENST00000493387 ERVK-6Q9BXR3 956 aa11.16□□□□□ -0.62
LSM2-214ENST00000493387 C1GALT1Q9NS00 363 aa11.16□□□□□ -0.62
LSM2-214ENST00000493387 DNAJC11Q9NVH1 559 aa11.16□□□□□ -0.62
LSM2-214ENST00000493387 OXSMQ9NWU1 459 aa11.16□□□□□ -0.62
LSM2-214ENST00000493387 GPRC5BQ9NZH0 403 aa11.16□□□□□ -0.62
LSM2-214ENST00000493387 OPTCQ9UBM4 332 aa11.16□□□□□ -0.62
LSM2-214ENST00000493387 POMT2Q9UKY4 750 aa11.16□□□□□ -0.62
LSM2-214ENST00000493387 DYRK1BQ9Y463 629 aa11.16□□□□□ -0.62
LSM2-214ENST00000493387 ANGPTL3Q9Y5C1 460 aa11.16□□□□□ -0.62
LSM2-214ENST00000493387 MN1Q10571 1320 aaPredicted RBP11.15□□□□□ -0.62
LSM2-214ENST00000493387 UNC13CQ8NB66 2214 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 A0A1W2PPV9 198 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 A0A1W2PQM1 296 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 KRT87PA6NCN2 255 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 TLCD2A6NGC4 264 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 CCNT2O60583 730 aaKnown RBP11.15□□□□□ -0.62
LSM2-214ENST00000493387 H2AFYO75367 372 aaKnown RBP11.15□□□□□ -0.62
LSM2-214ENST00000493387 KATNA1O75449 491 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 WDR47O94967 919 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 C9P02748 559 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 DHRS4L1P0CG22 281 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 UGT2B7P16662 529 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 EEF1DP29692 281 aaKnown RBP11.15□□□□□ -0.62
LSM2-214ENST00000493387 HPDP32754 393 aaPredicted RBP11.15□□□□□ -0.62
LSM2-214ENST00000493387 SERPINB4P48594 390 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 NOVA1P51513 510 aaKnown RBP11.15□□□□□ -0.62
LSM2-214ENST00000493387 PPP2R2AP63151 447 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 SIM1P81133 766 aaPredicted RBP11.15□□□□□ -0.62
LSM2-214ENST00000493387 PRDX1Q06830 199 aaKnown RBP11.15□□□□□ -0.62
LSM2-214ENST00000493387 TRA2AQ13595 282 aaKnown RBP eCLIP11.15□□□□□ -0.62
LSM2-214ENST00000493387 LIPMQ5VYY2 423 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 ICE2Q659A1 982 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 SPESP1Q6UW49 350 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 SUSD1Q6UWL2 747 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 RBM44Q6ZP01 1051 aaKnown RBP11.15□□□□□ -0.62
LSM2-214ENST00000493387 ALYREFQ86V81 257 aaKnown RBP11.15□□□□□ -0.62
LSM2-214ENST00000493387 TAX1BP1Q86VP1 789 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 C17orf64Q86WR6 236 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 KMT5CQ86Y97 462 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 NUDCD3Q8IVD9 361 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 TRIM42Q8IWZ5 723 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 HOMEZQ8IX15 550 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 ARFGAP2Q8N6H7 521 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 ANKRD42Q8N9B4 389 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 SNX31Q8N9S9 440 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 PPFIBP2Q8ND30 876 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 OR2A1Q8NGT9 310 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 PPP4R1Q8TF05 950 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 ZUFSPQ96AP4 578 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 GRAMD1AQ96CP6 724 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 L3HYPDHQ96EM0 354 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 TMEM74Q96NL1 305 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 OR2A14Q96R47 310 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 TMEM79Q9BSE2 394 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 SEMA6CQ9H3T2 930 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 SYNDIG1Q9H7V2 258 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 MRPS30Q9NP92 439 aaKnown RBP11.15□□□□□ -0.62
LSM2-214ENST00000493387 SPHK1Q9NYA1 384 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 SEMA5BQ9P283 1151 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 PDP2Q9P2J9 529 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 ANKMY1Q9P2S6 941 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 TAC3Q9UHF0 121 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 SNX7Q9UNH6 387 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 SLC22A14Q9Y267 594 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 STK38LQ9Y2H1 464 aa11.15□□□□□ -0.62
LSM2-214ENST00000493387 A0A0J9YY10 115 aa11.14□□□□□ -0.63
LSM2-214ENST00000493387 D6RAR5 112 aa11.14□□□□□ -0.63
LSM2-214ENST00000493387 H3BQF6 201 aa11.14□□□□□ -0.63
LSM2-214ENST00000493387 CLGNO14967 610 aa11.14□□□□□ -0.63
LSM2-214ENST00000493387 DKK1O94907 266 aa11.14□□□□□ -0.63
LSM2-214ENST00000493387 MLYCDO95822 493 aa11.14□□□□□ -0.63
LSM2-214ENST00000493387 BPGMP07738 259 aa11.14□□□□□ -0.63
LSM2-214ENST00000493387 RPS17P08708 135 aaKnown RBP11.14□□□□□ -0.63
LSM2-214ENST00000493387 EPB42P16452 691 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms