RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 EPHA10Q5JZY3 1008 aa5.01□□□□□ -1.61
SND1-216ENST00000492840 DUS1LQ6P1R4 473 aaKnown RBP5.01□□□□□ -1.61
SND1-216ENST00000492840 B3GNT6Q6ZMB0 384 aa5.01□□□□□ -1.61
SND1-216ENST00000492840 ATG9AQ7Z3C6 839 aa5.01□□□□□ -1.61
SND1-216ENST00000492840 GPSM1Q86YR5 675 aa5.01□□□□□ -1.61
SND1-216ENST00000492840 ELMOD2Q8IZ81 293 aa5.01□□□□□ -1.61
SND1-216ENST00000492840 DSELQ8IZU8 1212 aa5.01□□□□□ -1.61
SND1-216ENST00000492840 EMC1Q8N766 993 aa5.01□□□□□ -1.61
SND1-216ENST00000492840 ZNF611Q8N823 705 aa5.01□□□□□ -1.61
SND1-216ENST00000492840 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.01□□□□□ -1.61
SND1-216ENST00000492840 BICD2Q8TD16 824 aa5.01□□□□□ -1.61
SND1-216ENST00000492840 SLC9A6Q92581 669 aa5.01□□□□□ -1.61
SND1-216ENST00000492840 GDAP1L1Q96MZ0 367 aa5.01□□□□□ -1.61
SND1-216ENST00000492840 SFXN2Q96NB2 322 aa5.01□□□□□ -1.61
SND1-216ENST00000492840 TOX2Q96NM4 488 aa5.01□□□□□ -1.61
SND1-216ENST00000492840 DEFB118Q96PH6 123 aa5.01□□□□□ -1.61
SND1-216ENST00000492840 PANX3Q96QZ0 392 aa5.01□□□□□ -1.61
SND1-216ENST00000492840 KCNK16Q96T55 309 aa5.01□□□□□ -1.61
SND1-216ENST00000492840 TIMP4Q99727 224 aa5.01□□□□□ -1.61
SND1-216ENST00000492840 PKP2Q99959 881 aa5.01□□□□□ -1.61
SND1-216ENST00000492840 SEMA3CQ99985 751 aa5.01□□□□□ -1.61
SND1-216ENST00000492840 FNDC11Q9BVV2 318 aa5.01□□□□□ -1.61
SND1-216ENST00000492840 LSG1Q9H089 658 aaKnown RBP5.01□□□□□ -1.61
SND1-216ENST00000492840 FAM234AQ9H0X4 552 aa5.01□□□□□ -1.61
SND1-216ENST00000492840 POLE3Q9NRF9 147 aa5.01□□□□□ -1.61
SND1-216ENST00000492840 OR6C3Q9NZP0 311 aa5.01□□□□□ -1.61
SND1-216ENST00000492840 EXOC7Q9UPT5 735 aa5.01□□□□□ -1.61
SND1-216ENST00000492840 STRAPQ9Y3F4 350 aaKnown RBP5.01□□□□□ -1.61
SND1-216ENST00000492840 RNF114Q9Y508 228 aa5.01□□□□□ -1.61
SND1-216ENST00000492840 IKBKGQ9Y6K9 419 aa5.01□□□□□ -1.61
SND1-216ENST00000492840 MAP3K15Q6ZN16 1313 aa5□□□□□ -1.61
SND1-216ENST00000492840 ECM29Q5VYK3 1845 aa5□□□□□ -1.61
SND1-216ENST00000492840 CACNA1BQ00975 2339 aa5□□□□□ -1.61
SND1-216ENST00000492840 COL4A3Q01955 1670 aa5□□□□□ -1.61
SND1-216ENST00000492840 SYNJ2BP-COX16A0A087WUM0 186 aa5□□□□□ -1.61
SND1-216ENST00000492840 TRBV5-3A0A0A0MS03 114 aa5□□□□□ -1.61
SND1-216ENST00000492840 GRID2IPA4D2P6 1211 aa5□□□□□ -1.61
SND1-216ENST00000492840 MAGEA13PA6NCF6 341 aa5□□□□□ -1.61
SND1-216ENST00000492840 KPNA7A9QM74 516 aa5□□□□□ -1.61
SND1-216ENST00000492840 ERVV-1B6SEH8 477 aa5□□□□□ -1.61
SND1-216ENST00000492840 KBTBD13C9JR72 458 aa5□□□□□ -1.61
SND1-216ENST00000492840 FAM90A26D6RGX4 464 aa5□□□□□ -1.61
SND1-216ENST00000492840 PLK4O00444 970 aa5□□□□□ -1.61
SND1-216ENST00000492840 WNT9BO14905 357 aa5□□□□□ -1.61
SND1-216ENST00000492840 SPINT2O43291 252 aa5□□□□□ -1.61
SND1-216ENST00000492840 CRCPO75575 148 aa5□□□□□ -1.61
SND1-216ENST00000492840 TGFAP01135 160 aa5□□□□□ -1.61
SND1-216ENST00000492840 CSN3P07498 182 aa5□□□□□ -1.61
SND1-216ENST00000492840 CCDC192P0DO97 292 aa5□□□□□ -1.61
SND1-216ENST00000492840 WT1P19544 449 aaPredicted RBP5□□□□□ -1.61
SND1-216ENST00000492840 UGT1A1P22309 533 aa5□□□□□ -1.61
SND1-216ENST00000492840 SLC6A6P31641 620 aa5□□□□□ -1.61
SND1-216ENST00000492840 HNRNPH1P31943 449 aaKnown RBP5□□□□□ -1.61
SND1-216ENST00000492840 SFNP31947 248 aa5□□□□□ -1.61
SND1-216ENST00000492840 PSMC4P43686 418 aa5□□□□□ -1.61
SND1-216ENST00000492840 RGS7P49802 495 aa5□□□□□ -1.61
SND1-216ENST00000492840 SERPINH1P50454 418 aaKnown RBP5□□□□□ -1.61
SND1-216ENST00000492840 FOXM1Q08050 763 aa5□□□□□ -1.61
SND1-216ENST00000492840 TROAPQ12815 778 aa5□□□□□ -1.61
SND1-216ENST00000492840 TUBA3CQ13748 450 aa5□□□□□ -1.61
SND1-216ENST00000492840 GAMTQ14353 236 aa5□□□□□ -1.61
SND1-216ENST00000492840 TRADDQ15628 312 aa5□□□□□ -1.61
SND1-216ENST00000492840 SMTNL2Q2TAL5 461 aa5□□□□□ -1.61
SND1-216ENST00000492840 PIK3CD-AS1Q5SR53 167 aa5□□□□□ -1.61
SND1-216ENST00000492840 C6orf10Q5SRN2 563 aa5□□□□□ -1.61
SND1-216ENST00000492840 DDX59Q5T1V6 619 aaKnown RBP eCLIP5□□□□□ -1.61
SND1-216ENST00000492840 STRIP1Q5VSL9 837 aa5□□□□□ -1.61
SND1-216ENST00000492840 PRAMEF17Q5VTA0 474 aa5□□□□□ -1.61
SND1-216ENST00000492840 SUSD4Q5VX71 490 aa5□□□□□ -1.61
SND1-216ENST00000492840 CYB5D1Q6P9G0 228 aa5□□□□□ -1.61
SND1-216ENST00000492840 TUBA3EQ6PEY2 450 aa5□□□□□ -1.61
SND1-216ENST00000492840 KDELC1Q6UW63 502 aa5□□□□□ -1.61
SND1-216ENST00000492840 PRSS42Q7Z5A4 293 aa5□□□□□ -1.61
SND1-216ENST00000492840 FOXRED2Q8IWF2 684 aa5□□□□□ -1.61
SND1-216ENST00000492840 KDM8Q8N371 416 aa5□□□□□ -1.61
SND1-216ENST00000492840 GCSAMQ8N6F7 178 aa5□□□□□ -1.61
SND1-216ENST00000492840 TTC9BQ8N6N2 239 aa5□□□□□ -1.61
SND1-216ENST00000492840 PCDH20Q8N6Y1 951 aaKnown RBP5□□□□□ -1.61
SND1-216ENST00000492840 AMER3Q8N944 861 aa5□□□□□ -1.61
SND1-216ENST00000492840 FBXO30Q8TB52 745 aa5□□□□□ -1.61
SND1-216ENST00000492840 CCDC110Q8TBZ0 833 aa5□□□□□ -1.61
SND1-216ENST00000492840 TMEM163Q8TC26 289 aa5□□□□□ -1.61
SND1-216ENST00000492840 SLC35F5Q8WV83 523 aa5□□□□□ -1.61
SND1-216ENST00000492840 TAAR8Q969N4 342 aa5□□□□□ -1.61
SND1-216ENST00000492840 AP2M1Q96CW1 435 aa5□□□□□ -1.61
SND1-216ENST00000492840 MRPL38Q96DV4 380 aaKnown RBP5□□□□□ -1.61
SND1-216ENST00000492840 CHFRQ96EP1 664 aa5□□□□□ -1.61
SND1-216ENST00000492840 UROC1Q96N76 676 aa5□□□□□ -1.61
SND1-216ENST00000492840 SH2D3AQ9BRG2 576 aa5□□□□□ -1.61
SND1-216ENST00000492840 S1PR5Q9H228 398 aa5□□□□□ -1.61
SND1-216ENST00000492840 MMRN2Q9H8L6 949 aa5□□□□□ -1.61
SND1-216ENST00000492840 CLK4Q9HAZ1 481 aaKnown RBP5□□□□□ -1.61
SND1-216ENST00000492840 CPNE5Q9HCH3 593 aa5□□□□□ -1.61
SND1-216ENST00000492840 CNGB3Q9NQW8 809 aa5□□□□□ -1.61
SND1-216ENST00000492840 THSD1Q9NS62 852 aa5□□□□□ -1.61
SND1-216ENST00000492840 RCC2Q9P258 522 aaKnown RBP5□□□□□ -1.61
SND1-216ENST00000492840 KLHL13Q9P2N7 655 aa5□□□□□ -1.61
SND1-216ENST00000492840 KCNK6Q9Y257 313 aa5□□□□□ -1.61
SND1-216ENST00000492840 GRIP1Q9Y3R0 1128 aa5□□□□□ -1.61
SND1-216ENST00000492840 NME7Q9Y5B8 376 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms