RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 MYO1CO00159 1063 aa17.12■□□□□ 0.33
ABCF3-217ENST00000489719 SRPX2O60687 465 aaPredicted RBP17.12■□□□□ 0.33
ABCF3-217ENST00000489719 SYF2O95926 243 aaKnown RBP17.12■□□□□ 0.33
ABCF3-217ENST00000489719 CTSBP07858 339 aa17.12■□□□□ 0.33
ABCF3-217ENST00000489719 ELK3P41970 407 aa17.12■□□□□ 0.33
ABCF3-217ENST00000489719 ITGA8P53708 1063 aa17.12■□□□□ 0.33
ABCF3-217ENST00000489719 IL10RAQ13651 578 aa17.12■□□□□ 0.33
ABCF3-217ENST00000489719 FASTKQ14296 549 aaKnown RBP17.12■□□□□ 0.33
ABCF3-217ENST00000489719 GRM7Q14831 915 aa17.12■□□□□ 0.33
ABCF3-217ENST00000489719 LACTB2Q53H82 288 aaPredicted RBP17.12■□□□□ 0.33
ABCF3-217ENST00000489719 HP1BP3Q5SSJ5 553 aaPredicted RBP17.12■□□□□ 0.33
ABCF3-217ENST00000489719 ZNF385CQ66K41 422 aaPredicted RBP17.12■□□□□ 0.33
ABCF3-217ENST00000489719 HIBCHQ6NVY1 386 aaPredicted RBP17.12■□□□□ 0.33
ABCF3-217ENST00000489719 FAM198BQ6UWH4 519 aa17.12■□□□□ 0.33
ABCF3-217ENST00000489719 CYHR1Q6ZMK1 362 aa17.12■□□□□ 0.33
ABCF3-217ENST00000489719 IGDCC3Q8IVU1 814 aa17.12■□□□□ 0.33
ABCF3-217ENST00000489719 PALM2Q8IXS6 379 aa17.12■□□□□ 0.33
ABCF3-217ENST00000489719 OR2L3Q8NG85 312 aa17.12■□□□□ 0.33
ABCF3-217ENST00000489719 LRRC39Q96DD0 335 aa17.12■□□□□ 0.33
ABCF3-217ENST00000489719 CFAP36Q96G28 342 aa17.12■□□□□ 0.33
ABCF3-217ENST00000489719 SNF8Q96H20 258 aa17.12■□□□□ 0.33
ABCF3-217ENST00000489719 GBP5Q96PP8 586 aa17.12■□□□□ 0.33
ABCF3-217ENST00000489719 KRT12Q99456 494 aa17.12■□□□□ 0.33
ABCF3-217ENST00000489719 PKP4Q99569 1192 aa17.12■□□□□ 0.33
ABCF3-217ENST00000489719 TRIM51Q9BSJ1 452 aa17.12■□□□□ 0.33
ABCF3-217ENST00000489719 ACAT2Q9BWD1 397 aa17.12■□□□□ 0.33
ABCF3-217ENST00000489719 TRIM31Q9BZY9 425 aa17.12■□□□□ 0.33
ABCF3-217ENST00000489719 ACSS2Q9NR19 701 aa17.12■□□□□ 0.33
ABCF3-217ENST00000489719 UTP6Q9NYH9 597 aaKnown RBP17.12■□□□□ 0.33
ABCF3-217ENST00000489719 TAS2R13Q9NYV9 303 aa17.12■□□□□ 0.33
ABCF3-217ENST00000489719 ZC3H7BQ9UGR2 993 aaKnown RBP17.12■□□□□ 0.33
ABCF3-217ENST00000489719 TLK1Q9UKI8 766 aa17.12■□□□□ 0.33
ABCF3-217ENST00000489719 MED16Q9Y2X0 877 aa17.12■□□□□ 0.33
ABCF3-217ENST00000489719 EFCAB8A8MWE9 144 aa17.11■□□□□ 0.33
ABCF3-217ENST00000489719 GFYI3L273 518 aa17.11■□□□□ 0.33
ABCF3-217ENST00000489719 NDC80O14777 642 aa17.11■□□□□ 0.33
ABCF3-217ENST00000489719 AHSGP02765 367 aa17.11■□□□□ 0.33
ABCF3-217ENST00000489719 PIM1P11309 404 aaPredicted RBP17.11■□□□□ 0.33
ABCF3-217ENST00000489719 MCM3P25205 808 aa17.11■□□□□ 0.33
ABCF3-217ENST00000489719 PSMB5P28074 263 aa17.11■□□□□ 0.33
ABCF3-217ENST00000489719 CASQ1P31415 396 aa17.11■□□□□ 0.33
ABCF3-217ENST00000489719 RGS4P49798 205 aa17.11■□□□□ 0.33
ABCF3-217ENST00000489719 CCL11P51671 97 aa17.11■□□□□ 0.33
ABCF3-217ENST00000489719 PNLIPRP1P54315 467 aa17.11■□□□□ 0.33
ABCF3-217ENST00000489719 HIF1AQ16665 826 aa17.11■□□□□ 0.33
ABCF3-217ENST00000489719 FAM214AQ32MH5 1076 aa17.11■□□□□ 0.33
ABCF3-217ENST00000489719 NKAIN1Q4KMZ8 207 aa17.11■□□□□ 0.33
ABCF3-217ENST00000489719 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.11■□□□□ 0.33
ABCF3-217ENST00000489719 YOD1Q5VVQ6 348 aaPredicted RBP17.11■□□□□ 0.33
ABCF3-217ENST00000489719 SUSD1Q6UWL2 747 aa17.11■□□□□ 0.33
ABCF3-217ENST00000489719 KIAA0408Q6ZU52 694 aa17.11■□□□□ 0.33
ABCF3-217ENST00000489719 TTLL10Q6ZVT0 673 aa17.11■□□□□ 0.33
ABCF3-217ENST00000489719 CPNE9Q8IYJ1 553 aa17.11■□□□□ 0.33
ABCF3-217ENST00000489719 TTC29Q8NA56 475 aaPredicted RBP17.11■□□□□ 0.33
ABCF3-217ENST00000489719 FBXO15Q8NCQ5 510 aaPredicted RBP17.11■□□□□ 0.33
ABCF3-217ENST00000489719 GIMAP7Q8NHV1 300 aa17.11■□□□□ 0.33
ABCF3-217ENST00000489719 CERS2Q96G23 380 aa17.11■□□□□ 0.33
ABCF3-217ENST00000489719 PWWP2AQ96N64 755 aa17.11■□□□□ 0.33
ABCF3-217ENST00000489719 ING2Q9H160 280 aa17.11■□□□□ 0.33
ABCF3-217ENST00000489719 MRPS30Q9NP92 439 aaKnown RBP17.11■□□□□ 0.33
ABCF3-217ENST00000489719 KLK4Q9Y5K2 254 aa17.11■□□□□ 0.33
ABCF3-217ENST00000489719 A0A1W2PPV9 198 aa17.1■□□□□ 0.33
ABCF3-217ENST00000489719 ARGFXA6NJG6 315 aa17.1■□□□□ 0.33
ABCF3-217ENST00000489719 EIF3FO00303 357 aaPredicted RBP17.1■□□□□ 0.33
ABCF3-217ENST00000489719 CCNDBP1O95273 360 aa17.1■□□□□ 0.33
ABCF3-217ENST00000489719 VSX2P58304 361 aaPredicted RBP17.1■□□□□ 0.33
ABCF3-217ENST00000489719 SSPNQ14714 243 aa17.1■□□□□ 0.33
ABCF3-217ENST00000489719 WASHC2DQ5SRD0 308 aa17.1■□□□□ 0.33
ABCF3-217ENST00000489719 FAM69BQ5VUD6 431 aa17.1■□□□□ 0.33
ABCF3-217ENST00000489719 LRRC8EQ6NSJ5 796 aa17.1■□□□□ 0.33
ABCF3-217ENST00000489719 TCTN3Q6NUS6 607 aa17.1■□□□□ 0.33
ABCF3-217ENST00000489719 UBE2R2Q712K3 238 aaPredicted RBP17.1■□□□□ 0.33
ABCF3-217ENST00000489719 RAB43Q86YS6 212 aa17.1■□□□□ 0.33
ABCF3-217ENST00000489719 BBOF1Q8ND07 529 aa17.1■□□□□ 0.33
ABCF3-217ENST00000489719 CD200R1Q8TD46 325 aa17.1■□□□□ 0.33
ABCF3-217ENST00000489719 MCOLN3Q8TDD5 553 aa17.1■□□□□ 0.33
ABCF3-217ENST00000489719 NDNQ99608 321 aa17.1■□□□□ 0.33
ABCF3-217ENST00000489719 DPH7Q9BTV6 452 aa17.1■□□□□ 0.33
ABCF3-217ENST00000489719 CHMP2BQ9UQN3 213 aa17.1■□□□□ 0.33
ABCF3-217ENST00000489719 SNX24Q9Y343 169 aa17.1■□□□□ 0.33
ABCF3-217ENST00000489719 PTRH2Q9Y3E5 179 aaKnown RBP17.1■□□□□ 0.33
ABCF3-217ENST00000489719 CFAP46Q8IYW2 2715 aa17.1■□□□□ 0.33
ABCF3-217ENST00000489719 A0A0J9YVX5 310 aa17.09■□□□□ 0.33
ABCF3-217ENST00000489719 CTSVO60911 334 aa17.09■□□□□ 0.33
ABCF3-217ENST00000489719 SEC31AO94979 1220 aaKnown RBP17.09■□□□□ 0.33
ABCF3-217ENST00000489719 SLC16A8O95907 504 aa17.09■□□□□ 0.33
ABCF3-217ENST00000489719 EIF2S1P05198 315 aaKnown RBP17.09■□□□□ 0.33
ABCF3-217ENST00000489719 ERGP11308 486 aa17.09■□□□□ 0.33
ABCF3-217ENST00000489719 GABRB3P28472 473 aa17.09■□□□□ 0.33
ABCF3-217ENST00000489719 OTX2P32243 289 aa17.09■□□□□ 0.33
ABCF3-217ENST00000489719 PRDX1Q06830 199 aaKnown RBP17.09■□□□□ 0.33
ABCF3-217ENST00000489719 TEDDM1Q5T9Z0 273 aa17.09■□□□□ 0.33
ABCF3-217ENST00000489719 THEMIS2Q5TEJ8 643 aa17.09■□□□□ 0.33
ABCF3-217ENST00000489719 FBXO42Q6P3S6 717 aa17.09■□□□□ 0.33
ABCF3-217ENST00000489719 ASB18Q6ZVZ8 466 aa17.09■□□□□ 0.33
ABCF3-217ENST00000489719 MAATS1Q7Z4T9 603 aa17.09■□□□□ 0.33
ABCF3-217ENST00000489719 CNTN4Q8IWV2 1026 aa17.09■□□□□ 0.33
ABCF3-217ENST00000489719 TEX19Q8NA77 164 aa17.09■□□□□ 0.33
ABCF3-217ENST00000489719 ADAMTS17Q8TE56 1095 aa17.09■□□□□ 0.33
ABCF3-217ENST00000489719 EEF1AKMT1Q8WVE0 214 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms