RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 AIMP2Q13155 320 aaKnown RBP11.25□□□□□ -0.61
ACTN4-206ENST00000489451 CYP2A13Q16696 494 aa11.25□□□□□ -0.61
ACTN4-206ENST00000489451 CTSL3PQ5NE16 218 aa11.25□□□□□ -0.61
ACTN4-206ENST00000489451 PRAMEF13Q5VWM6 474 aa11.25□□□□□ -0.61
ACTN4-206ENST00000489451 UNC5DQ6UXZ4 953 aa11.25□□□□□ -0.61
ACTN4-206ENST00000489451 ZNF662Q6ZS27 426 aa11.25□□□□□ -0.61
ACTN4-206ENST00000489451 SLC13A5Q86YT5 568 aaPredicted RBP11.25□□□□□ -0.61
ACTN4-206ENST00000489451 OR6P1Q8NGX9 317 aa11.25□□□□□ -0.61
ACTN4-206ENST00000489451 FRMD8P1Q9BZ68 369 aaPredicted RBP11.25□□□□□ -0.61
ACTN4-206ENST00000489451 ILKAPQ9H0C8 392 aaPredicted RBP11.25□□□□□ -0.61
ACTN4-206ENST00000489451 WDR54Q9H977 334 aa11.25□□□□□ -0.61
ACTN4-206ENST00000489451 ATP13A2Q9NQ11 1180 aa11.25□□□□□ -0.61
ACTN4-206ENST00000489451 LZTFL1Q9NQ48 299 aa11.25□□□□□ -0.61
ACTN4-206ENST00000489451 CHRAC1Q9NRG0 131 aa11.25□□□□□ -0.61
ACTN4-206ENST00000489451 RAB6BQ9NRW1 208 aa11.25□□□□□ -0.61
ACTN4-206ENST00000489451 IRAK4Q9NWZ3 460 aa11.25□□□□□ -0.61
ACTN4-206ENST00000489451 STOX2Q9P2F5 926 aaPredicted RBP11.25□□□□□ -0.61
ACTN4-206ENST00000489451 KLK4Q9Y5K2 254 aa11.25□□□□□ -0.61
ACTN4-206ENST00000489451 HEATR5BQ9P2D3 2071 aa11.24□□□□□ -0.61
ACTN4-206ENST00000489451 PCNX1Q96RV3 2341 aa11.24□□□□□ -0.61
ACTN4-206ENST00000489451 CELSR1Q9NYQ6 3014 aa11.24□□□□□ -0.61
ACTN4-206ENST00000489451 ADGRG4Q8IZF6 3080 aa11.24□□□□□ -0.61
ACTN4-206ENST00000489451 CPAMD8Q8IZJ3 1885 aa11.24□□□□□ -0.61
ACTN4-206ENST00000489451 LOC105369274A0A096LPK9 316 aa11.24□□□□□ -0.61
ACTN4-206ENST00000489451 LOC102723532A0A0G2JNH3 316 aa11.24□□□□□ -0.61
ACTN4-206ENST00000489451 PRMT5O14744 637 aaPredicted RBP11.24□□□□□ -0.61
ACTN4-206ENST00000489451 IFNB1P01574 187 aa11.24□□□□□ -0.61
ACTN4-206ENST00000489451 ALBP02768 609 aa11.24□□□□□ -0.61
ACTN4-206ENST00000489451 ALPPP05187 535 aa11.24□□□□□ -0.61
ACTN4-206ENST00000489451 APRTP07741 180 aa11.24□□□□□ -0.61
ACTN4-206ENST00000489451 VARSP26640 1264 aaKnown RBP11.24□□□□□ -0.61
ACTN4-206ENST00000489451 NMBRP28336 390 aa11.24□□□□□ -0.61
ACTN4-206ENST00000489451 STIP1P31948 543 aaKnown RBP11.24□□□□□ -0.61
ACTN4-206ENST00000489451 RPL22P35268 128 aaKnown RBP11.24□□□□□ -0.61
ACTN4-206ENST00000489451 GLRBP48167 497 aa11.24□□□□□ -0.61
ACTN4-206ENST00000489451 EFNA3P52797 238 aa11.24□□□□□ -0.61
ACTN4-206ENST00000489451 SNRPNP63162 240 aaKnown RBP11.24□□□□□ -0.61
ACTN4-206ENST00000489451 FASTKQ14296 549 aaKnown RBP11.24□□□□□ -0.61
ACTN4-206ENST00000489451 GBX1Q14549 363 aa11.24□□□□□ -0.61
ACTN4-206ENST00000489451 FASTKD1Q53R41 847 aaKnown RBP11.24□□□□□ -0.61
ACTN4-206ENST00000489451 PPP1R21Q6ZMI0 780 aa11.24□□□□□ -0.61
ACTN4-206ENST00000489451 OR4N4Q8N0Y3 316 aa11.24□□□□□ -0.61
ACTN4-206ENST00000489451 TRIM58Q8NG06 486 aa11.24□□□□□ -0.61
ACTN4-206ENST00000489451 OR11G2Q8NGC1 345 aa11.24□□□□□ -0.61
ACTN4-206ENST00000489451 OR2A1Q8NGT9 310 aa11.24□□□□□ -0.61
ACTN4-206ENST00000489451 PPP4R1Q8TF05 950 aa11.24□□□□□ -0.61
ACTN4-206ENST00000489451 ASZ1Q8WWH4 475 aa11.24□□□□□ -0.61
ACTN4-206ENST00000489451 DLG3Q92796 817 aa11.24□□□□□ -0.61
ACTN4-206ENST00000489451 PEX13Q92968 403 aa11.24□□□□□ -0.61
ACTN4-206ENST00000489451 C10orf90Q96M02 699 aa11.24□□□□□ -0.61
ACTN4-206ENST00000489451 WDR77Q9BQA1 342 aaPredicted RBP11.24□□□□□ -0.61
ACTN4-206ENST00000489451 GRPEL1Q9HAV7 217 aa11.24□□□□□ -0.61
ACTN4-206ENST00000489451 CATSPERZQ9NTU4 200 aa11.24□□□□□ -0.61
ACTN4-206ENST00000489451 GALPQ9UBC7 116 aa11.24□□□□□ -0.61
ACTN4-206ENST00000489451 CDC23Q9UJX2 597 aa11.24□□□□□ -0.61
ACTN4-206ENST00000489451 SLC5A6Q9Y289 635 aa11.24□□□□□ -0.61
ACTN4-206ENST00000489451 COPG1Q9Y678 874 aaKnown RBP11.24□□□□□ -0.61
ACTN4-206ENST00000489451 MAU2Q9Y6X3 613 aa11.24□□□□□ -0.61
ACTN4-206ENST00000489451 ZGRF1Q86YA3 2104 aa11.24□□□□□ -0.61
ACTN4-206ENST00000489451 CNTRLQ7Z7A1 2325 aa11.23□□□□□ -0.61
ACTN4-206ENST00000489451 IGKV1-8A0A0C4DH67 115 aa11.23□□□□□ -0.61
ACTN4-206ENST00000489451 CD3EAPO15446 510 aaKnown RBP11.23□□□□□ -0.61
ACTN4-206ENST00000489451 IPO13O94829 963 aaKnown RBP11.23□□□□□ -0.61
ACTN4-206ENST00000489451 KLHL18O94889 574 aa11.23□□□□□ -0.61
ACTN4-206ENST00000489451 IGHEP01854 428 aa11.23□□□□□ -0.61
ACTN4-206ENST00000489451 CD63P08962 238 aa11.23□□□□□ -0.61
ACTN4-206ENST00000489451 ITGA3P26006 1051 aa11.23□□□□□ -0.61
ACTN4-206ENST00000489451 ARSFP54793 590 aa11.23□□□□□ -0.61
ACTN4-206ENST00000489451 PRAMEP78395 509 aa11.23□□□□□ -0.61
ACTN4-206ENST00000489451 SNX1Q13596 522 aa11.23□□□□□ -0.61
ACTN4-206ENST00000489451 GRM7Q14831 915 aa11.23□□□□□ -0.61
ACTN4-206ENST00000489451 SF1Q15637 639 aaKnown RBP11.23□□□□□ -0.61
ACTN4-206ENST00000489451 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.23□□□□□ -0.61
ACTN4-206ENST00000489451 MEI1Q5TIA1 1274 aa11.23□□□□□ -0.61
ACTN4-206ENST00000489451 RNF44Q7L0R7 432 aa11.23□□□□□ -0.61
ACTN4-206ENST00000489451 KCNMB4Q86W47 210 aa11.23□□□□□ -0.61
ACTN4-206ENST00000489451 PARP9Q8IXQ6 854 aa11.23□□□□□ -0.61
ACTN4-206ENST00000489451 SHISA5Q8N114 240 aa11.23□□□□□ -0.61
ACTN4-206ENST00000489451 ZADH2Q8N4Q0 377 aa11.23□□□□□ -0.61
ACTN4-206ENST00000489451 ARHGEF39Q8N4T4 335 aa11.23□□□□□ -0.61
ACTN4-206ENST00000489451 ST6GALNAC3Q8NDV1 305 aa11.23□□□□□ -0.61
ACTN4-206ENST00000489451 OR2L3Q8NG85 312 aa11.23□□□□□ -0.61
ACTN4-206ENST00000489451 HMGCLL1Q8TB92 370 aa11.23□□□□□ -0.61
ACTN4-206ENST00000489451 NACC2Q96BF6 587 aa11.23□□□□□ -0.61
ACTN4-206ENST00000489451 SLC22A18Q96BI1 424 aa11.23□□□□□ -0.61
ACTN4-206ENST00000489451 BIRC8Q96P09 236 aa11.23□□□□□ -0.61
ACTN4-206ENST00000489451 MIPEPQ99797 713 aa11.23□□□□□ -0.61
ACTN4-206ENST00000489451 SELENOSQ9BQE4 189 aa11.23□□□□□ -0.61
ACTN4-206ENST00000489451 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.23□□□□□ -0.61
ACTN4-206ENST00000489451 A0A0J9YVX5 310 aa11.22□□□□□ -0.61
ACTN4-206ENST00000489451 TCRBV7S3A2A0A539 114 aa11.22□□□□□ -0.61
ACTN4-206ENST00000489451 OR2A25A4D2G3 310 aa11.22□□□□□ -0.61
ACTN4-206ENST00000489451 TARM1B6A8C7 271 aa11.22□□□□□ -0.61
ACTN4-206ENST00000489451 NIPSNAP2O75323 286 aa11.22□□□□□ -0.61
ACTN4-206ENST00000489451 GAS8O95995 478 aa11.22□□□□□ -0.61
ACTN4-206ENST00000489451 APOA4P06727 396 aa11.22□□□□□ -0.61
ACTN4-206ENST00000489451 F7P08709 466 aaPredicted RBP11.22□□□□□ -0.61
ACTN4-206ENST00000489451 ERGP11308 486 aa11.22□□□□□ -0.61
ACTN4-206ENST00000489451 RPS3P23396 243 aaKnown RBP eCLIP11.22□□□□□ -0.611e-16■■■□□ 15.2
ACTN4-206ENST00000489451 SESN2P58004 480 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms