RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 SLC28A1O00337 649 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 UBDO15205 165 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 RGS14O43566 566 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 ATP6AP2O75787 350 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 EML2O95834 649 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 VIPP01282 170 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 CELA2BP08218 269 aaPredicted RBP9.69□□□□□ -0.86
USP11-211ENST00000489111 JUPP14923 745 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 EZRP15311 586 aaKnown RBP9.69□□□□□ -0.86
USP11-211ENST00000489111 LBPP18428 481 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 CSNK1EP49674 416 aaKnown RBP9.69□□□□□ -0.86
USP11-211ENST00000489111 HTR6P50406 440 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 STX1BP61266 288 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 HNRNPKP61978 463 aaKnown RBP eCLIP9.69□□□□□ -0.86
USP11-211ENST00000489111 C1orf61Q13536 156 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 UBAP2LQ14157 1087 aaKnown RBP9.69□□□□□ -0.86
USP11-211ENST00000489111 DOC2AQ14183 400 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 FASTKQ14296 549 aaKnown RBP9.69□□□□□ -0.86
USP11-211ENST00000489111 NR6A1Q15406 480 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 ZRSR2Q15696 482 aaKnown RBP9.69□□□□□ -0.86
USP11-211ENST00000489111 HIST2H2ACQ16777 129 aaPredicted RBP9.69□□□□□ -0.86
USP11-211ENST00000489111 ATP6AP1LQ52LC2 224 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 XKR7Q5GH72 579 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 PAGE2BQ5JRK9 111 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 FAM219BQ5XKK7 198 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 FRG2Q64ET8 278 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 FAM91A1Q658Y4 838 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 PMS2CLQ68D20 193 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 HIST2H2AA3Q6FI13 130 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 GRHL2Q6ISB3 625 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 SCIMPQ6UWF3 145 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 LCTLQ6UWM7 567 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 C17orf64Q86WR6 236 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 GKN2Q86XP6 184 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 LRRC56Q8IYG6 542 aaPredicted RBP9.69□□□□□ -0.86
USP11-211ENST00000489111 C2orf73Q8N5S3 287 aaPredicted RBP9.69□□□□□ -0.86
USP11-211ENST00000489111 LMNTD1Q8N9Z9 388 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 AVL9Q8NBF6 648 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 FAM46DQ8NEK8 389 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 C1orf216Q8TAB5 229 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 LMX1AQ8TE12 382 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 SETD7Q8WTS6 366 aaKnown RBP9.69□□□□□ -0.86
USP11-211ENST00000489111 SLC5A11Q8WWX8 675 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 SELENOMQ8WWX9 145 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 LCN9Q8WX39 176 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 NEIL2Q969S2 332 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 REPS1Q96D71 796 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 MARK4Q96L34 752 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 FRG2BQ96QU4 278 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 OR4K3Q96R72 315 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 TUBB6Q9BUF5 446 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 ACAT2Q9BWD1 397 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 TUBB1Q9H4B7 451 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 EHD1Q9H4M9 534 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 XKR8Q9H6D3 395 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 AKTIPQ9H8T0 292 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 SAR1AQ9NR31 198 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 POT1Q9NUX5 634 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 TAC3Q9UHF0 121 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 KLF15Q9UIH9 416 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 ZNF490Q9ULM2 529 aaPredicted RBP9.69□□□□□ -0.86
USP11-211ENST00000489111 G3BP2Q9UN86 482 aaKnown RBP9.69□□□□□ -0.86
USP11-211ENST00000489111 ICKQ9UPZ9 632 aa9.69□□□□□ -0.86
USP11-211ENST00000489111 NUMA1Q14980 2115 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 TRBV23OR9-2A0A075B6M9 112 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 KCNE1BA0A087WTH5 132 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 A0A1B0GTW7 788 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 SLC22A2O15244 555 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 PEX11AO75192 247 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 CCNDBP1O95273 360 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 PCNAP12004 261 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 CDH1P12830 882 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 NPPBP16860 134 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 VARSP26640 1264 aaKnown RBP9.68□□□□□ -0.86
USP11-211ENST00000489111 PHEXP78562 749 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 PCDH1Q08174 1060 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 DMTNQ08495 405 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 SRSF5Q13243 272 aaKnown RBP9.68□□□□□ -0.86
USP11-211ENST00000489111 BIRC2Q13490 618 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 LAPTM5Q13571 262 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 SLBPQ14493 270 aaKnown RBP eCLIP9.68□□□□□ -0.86
USP11-211ENST00000489111 SQLEQ14534 574 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 KRT72Q14CN4 511 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 ABRAXAS2Q15018 415 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 KIF19Q2TAC6 998 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 GALNTL6Q49A17 601 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 C10orf62Q5T681 223 aaPredicted RBP9.68□□□□□ -0.86
USP11-211ENST00000489111 TMEM198Q66K66 360 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 ATG9BQ674R7 924 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 IYDQ6PHW0 289 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 NXPE4Q6UWF7 544 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 SLCO4C1Q6ZQN7 724 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 RNF165Q6ZSG1 346 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 SPATA19Q7Z5L4 167 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 AMIGO1Q86WK6 493 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 KRT78Q8N1N4 520 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 FBXL6Q8N531 539 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 ZNF548Q8NEK5 533 aaPredicted RBP9.68□□□□□ -0.86
USP11-211ENST00000489111 HMGCLL1Q8TB92 370 aa9.68□□□□□ -0.86
USP11-211ENST00000489111 SLC37A2Q8TED4 501 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms