RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 ARL4DP49703 201 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 IFFO1Q0D2I5 559 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 EIF3IQ13347 325 aaKnown RBP10.65□□□□□ -0.7
UBE4B-210ENST00000488228 NAE1Q13564 534 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 SF1Q15637 639 aaKnown RBP10.65□□□□□ -0.7
UBE4B-210ENST00000488228 GPR19Q15760 415 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 ZIC1Q15915 447 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 SLC5A12Q1EHB4 618 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 FBXO48Q5FWF7 155 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 THEMIS2Q5TEJ8 643 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 PRAMEF13Q5VWM6 474 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 KIAA1614Q5VZ46 1190 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 CLEC14AQ86T13 490 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 GPSM1Q86YR5 675 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 CYP4X1Q8N118 509 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 BMPERQ8N8U9 685 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 C19orf47Q8N9M1 422 aaKnown RBP10.65□□□□□ -0.7
UBE4B-210ENST00000488228 OR2L3Q8NG85 312 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 OR2A1Q8NGT9 310 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 MDM1Q8TC05 714 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 KLHL6Q8WZ60 621 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 ANKRD7Q92527 254 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 KIAA1191Q96A73 305 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 PYCR2Q96C36 320 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 FBXL8Q96CD0 374 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 MTBPQ96DY7 904 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 HIST1H2AHQ96KK5 128 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 TRAPPC9Q96Q05 1148 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 HIST1H2AJQ99878 128 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 CTRCQ99895 268 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 H2AFJQ9BTM1 129 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 TMEM121BQ9BXQ6 578 aaPredicted RBP10.65□□□□□ -0.7
UBE4B-210ENST00000488228 TRIM54Q9BYV2 358 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 NRSN2Q9GZP1 204 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 NMRAL1Q9HBL8 299 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 APMAPQ9HDC9 416 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 SLC6A20Q9NP91 592 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 C1GALT1Q9NS00 363 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 CUEDC1Q9NWM3 386 aaPredicted RBP10.65□□□□□ -0.7
UBE4B-210ENST00000488228 AKAP7Q9P0M2 348 aaPredicted RBP10.65□□□□□ -0.7
UBE4B-210ENST00000488228 SEMA5BQ9P283 1151 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 RNF112Q9ULX5 631 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 BTRCQ9Y297 605 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 AK5Q9Y6K8 562 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 USP24Q9UPU5 2620 aa10.65□□□□□ -0.71
UBE4B-210ENST00000488228 A0A1W2PPM1 405 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 TLDC2A0PJX2 215 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 CCDC151A5D8V7 595 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 C1QTNF9BB2RNN3 333 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 UBXN8O00124 270 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 TK2O00142 265 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 KERAO60938 352 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 CDH16O75309 829 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 TNFSF15O95150 251 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 C1QTNF9P0C862 333 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 FOLR1P15328 257 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 KRT15P19012 456 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 HSD17B2P37059 387 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 SLC26A3P40879 764 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 KCNC1P48547 511 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 HSD11B2P80365 405 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 FOXM1Q08050 763 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 TUBB3Q13509 450 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 COL9A2Q14055 689 aaPredicted RBP10.64□□□□□ -0.71
UBE4B-210ENST00000488228 RTP5Q14D33 572 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 TGFBIQ15582 683 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 FAM83EQ2M2I3 478 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 TECRLQ5HYJ1 363 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 LGSNQ5TDP6 509 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 ICE2Q659A1 982 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 CDHR3Q6ZTQ4 885 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 CCDC91Q7Z6B0 441 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 ISCA2Q86U28 154 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 TDRPQ86YL5 185 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 SLC22A18Q96BI1 424 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 GPR78Q96P69 363 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 OR6C1Q96RD1 312 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 ATOH8Q96SQ7 321 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 TMEM79Q9BSE2 394 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 PPCSQ9HAB8 311 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 FAM60AQ9NP50 221 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 ASCL3Q9NQ33 180 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 WWOXQ9NZC7 414 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 NUDT4Q9NZJ9 180 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 CD274Q9NZQ7 290 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 FOXJ2Q9P0K8 574 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 XPR1Q9UBH6 696 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 PCDHB11Q9Y5F2 797 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 PCDHGA8Q9Y5G5 932 aa10.64□□□□□ -0.71
UBE4B-210ENST00000488228 IGKV1-8A0A0C4DH67 115 aa10.63□□□□□ -0.71
UBE4B-210ENST00000488228 B4E171 279 aa10.63□□□□□ -0.71
UBE4B-210ENST00000488228 C9orf172C9J069 976 aa10.63□□□□□ -0.71
UBE4B-210ENST00000488228 CTIFO43310 598 aaKnown RBP10.63□□□□□ -0.71
UBE4B-210ENST00000488228 HCRTR1O43613 425 aa10.63□□□□□ -0.71
UBE4B-210ENST00000488228 ERLIN1O75477 346 aa10.63□□□□□ -0.71
UBE4B-210ENST00000488228 S100BP04271 92 aaPredicted RBP10.63□□□□□ -0.71
UBE4B-210ENST00000488228 ANXA5P08758 320 aa10.63□□□□□ -0.71
UBE4B-210ENST00000488228 PYGBP11216 843 aa10.63□□□□□ -0.71
UBE4B-210ENST00000488228 CMPK1P30085 196 aa10.63□□□□□ -0.71
UBE4B-210ENST00000488228 TSPAN7P41732 249 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms