RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, human

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42BPA-213	ENST00000488131	ZNF600	Q6ZNG1	722 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	EFL1	Q7Z2Z2	1120 aa	Known RBP	4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	MAMDC2	Q7Z304	686 aa	Predicted RBP	4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	SYVN1	Q86TM6	617 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	TMEM135	Q86UB9	458 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	STK32C	Q86UX6	486 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	XYLT1	Q86Y38	959 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	DCP1B	Q8IZD4	617 aa	Known RBP	4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	CENPL	Q8N0S6	344 aa	Predicted RBP	4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	RBFA	Q8N0V3	343 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	EMC1	Q8N766	993 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	RCBTB1	Q8NDN9	531 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	OR52H1	Q8NGJ2	320 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	OR9I1	Q8NGQ6	314 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	OR8K5	Q8NH50	307 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	NSUN6	Q8TEA1	469 aa	Known RBP	4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	IPCEF1	Q8WWN9	437 aa	Predicted RBP	4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	SMG7	Q92540	1137 aa	Known RBP	4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	LPAR1	Q92633	364 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	UFD1	Q92890	307 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	AP2M1	Q96CW1	435 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	LRRC58	Q96CX6	371 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	RNF31	Q96EP0	1072 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	VPS39	Q96JC1	886 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	C1orf74	Q96LT6	269 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	GPR137	Q96N19	417 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	SPATA13	Q96N96	652 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	TSNARE1	Q96NA8	513 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	CCDC115	Q96NT0	180 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	WDFY2	Q96P53	400 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	GPR78	Q96P69	363 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	NEDD4L	Q96PU5	975 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	TBCB	Q99426	244 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	MRPL57	Q9BQC6	102 aa	Known RBP	4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	MXRA8	Q9BRK3	442 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	TRMO	Q9BU70	441 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	TTLL2	Q9BWV7	592 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	SLC22A4	Q9H015	551 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	SPNS1	Q9H2V7	528 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	DHX35	Q9H5Z1	703 aa	Known RBP	4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	TASP1	Q9H6P5	420 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	C3orf14	Q9HBI5	128 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	ZBTB20	Q9HC78	741 aa	Predicted RBP	4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	ITM2C	Q9NQX7	267 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	NSMCE4A	Q9NXX6	385 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	MRPL39	Q9NYK5	338 aa	Known RBP	4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	ERVK-18	Q9QC07	812 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	XPR1	Q9UBH6	696 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	DNAJB9	Q9UBS3	223 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	TEKT2	Q9UIF3	430 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	DUSP13	Q9UII6	198 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	NUDT5	Q9UKK9	219 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	TRHDE	Q9UKU6	1024 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	PRELID3B	Q9Y3B1	194 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	STYXL1	Q9Y6J8	313 aa		4.64	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	COL1A2	P08123	1366 aa		4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	DOCK5	Q9H7D0	1870 aa		4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	ZCWPW2	A0A1B0GU75	182 aa		4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131		A0A1B0GVM2	712 aa		4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	RPS10-NUDT3	A0A1W2PQS6	291 aa		4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	CLRN2	A0PK11	232 aa		4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	TUBAL3	A6NHL2	446 aa		4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	OR6C70	A6NIJ9	312 aa		4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	ZNF98	A6NK75	572 aa		4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	HACD1	B0YJ81	288 aa		4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131		G3V2T6	193 aa		4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131		I3L521	148 aa		4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	BCKDK	O14874	412 aa		4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	MDM4	O15151	490 aa		4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	NCAM2	O15394	837 aa		4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	CA12	O43570	354 aa		4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	EFCAB14	O75071	495 aa		4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	OR5F1	O95221	314 aa		4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	NPPA	P01160	153 aa		4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	HMGCR	P04035	888 aa		4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	SERPINF2	P08697	491 aa		4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	SLC35E2B	P0CK96	405 aa		4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	ERVK-10	P10266	1014 aa		4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	TGFB3	P10600	412 aa		4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	CYP2C8	P10632	490 aa		4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	MTHFD1	P11586	935 aa	Known RBP	4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	IFI30	P13284	250 aa		4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	TNNI3	P19429	210 aa		4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	POU3F2	P20265	443 aa	Predicted RBP	4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	MAG	P20916	626 aa		4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	CPN2	P22792	545 aa		4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	ATP5F1	P24539	256 aa	Predicted RBP	4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	ATIC	P31939	592 aa		4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	CD96	P40200	585 aa		4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	NR2C2	P49116	596 aa		4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	CLK1	P49759	484 aa	Known RBP	4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	PCBP3	P57721	371 aa	Known RBP	4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	GPR85	P60893	370 aa		4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	RBP5	P82980	135 aa		4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	LIPE	Q05469	1076 aa		4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	POU5F1B	Q06416	359 aa		4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	DMP1	Q13316	513 aa	Predicted RBP	4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	LAPTM5	Q13571	262 aa		4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	PRPSAP1	Q14558	356 aa		4.63	□□□□□ -1.67
CDC42BPA-213	ENST00000488131	ZNF273	Q14593	569 aa		4.63	□□□□□ -1.67

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