RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 UNC5DQ6UXZ4 953 aa18.57■□□□□ 0.56
SMPDL3A-202ENST00000487215 KBTBD2Q8IY47 623 aa18.57■□□□□ 0.56
SMPDL3A-202ENST00000487215 TAB3Q8N5C8 712 aaPredicted RBP18.57■□□□□ 0.56
SMPDL3A-202ENST00000487215 PSMF1Q92530 271 aa18.57■□□□□ 0.56
SMPDL3A-202ENST00000487215 ALG3Q92685 438 aa18.57■□□□□ 0.56
SMPDL3A-202ENST00000487215 HDAC10Q969S8 669 aa18.57■□□□□ 0.56
SMPDL3A-202ENST00000487215 MIEF2Q96C03 454 aa18.57■□□□□ 0.56
SMPDL3A-202ENST00000487215 ZNF304Q9HCX3 659 aa18.57■□□□□ 0.56
SMPDL3A-202ENST00000487215 PLA2G3Q9NZ20 509 aa18.57■□□□□ 0.56
SMPDL3A-202ENST00000487215 PTGFRNQ9P2B2 879 aa18.57■□□□□ 0.56
SMPDL3A-202ENST00000487215 C3orf18Q9UK00 162 aa18.57■□□□□ 0.56
SMPDL3A-202ENST00000487215 SLC39A10Q9ULF5 831 aa18.57■□□□□ 0.56
SMPDL3A-202ENST00000487215 KLF2Q9Y5W3 355 aaPredicted RBP18.57■□□□□ 0.56
SMPDL3A-202ENST00000487215 ZGRF1Q86YA3 2104 aa18.56■□□□□ 0.56
SMPDL3A-202ENST00000487215 DYTNA2CJ06 578 aa18.56■□□□□ 0.56
SMPDL3A-202ENST00000487215 IQCF5A8MTL0 148 aa18.56■□□□□ 0.56
SMPDL3A-202ENST00000487215 PRICKLE3O43900 615 aaPredicted RBP18.56■□□□□ 0.56
SMPDL3A-202ENST00000487215 SRPX2O60687 465 aaPredicted RBP18.56■□□□□ 0.56
SMPDL3A-202ENST00000487215 TNFSF10P50591 281 aa18.56■□□□□ 0.56
SMPDL3A-202ENST00000487215 GDF10P55107 478 aa18.56■□□□□ 0.56
SMPDL3A-202ENST00000487215 RIPPLY3P57055 190 aa18.56■□□□□ 0.56
SMPDL3A-202ENST00000487215 OCA2Q04671 838 aa18.56■□□□□ 0.56
SMPDL3A-202ENST00000487215 INAQ16352 499 aa18.56■□□□□ 0.56
SMPDL3A-202ENST00000487215 P3H1Q32P28 736 aa18.56■□□□□ 0.56
SMPDL3A-202ENST00000487215 ATG9BQ674R7 924 aa18.56■□□□□ 0.56
SMPDL3A-202ENST00000487215 AFTPHQ6ULP2 937 aa18.56■□□□□ 0.56
SMPDL3A-202ENST00000487215 OR52K1Q8NGK4 314 aa18.56■□□□□ 0.56
SMPDL3A-202ENST00000487215 BRIX1Q8TDN6 353 aaKnown RBP18.56■□□□□ 0.56
SMPDL3A-202ENST00000487215 ASZ1Q8WWH4 475 aa18.56■□□□□ 0.56
SMPDL3A-202ENST00000487215 ZUFSPQ96AP4 578 aa18.56■□□□□ 0.56
SMPDL3A-202ENST00000487215 TTC1Q99614 292 aa18.56■□□□□ 0.56
SMPDL3A-202ENST00000487215 ZNF282Q9UDV7 671 aaPredicted RBP18.56■□□□□ 0.56
SMPDL3A-202ENST00000487215 SLC2A6Q9UGQ3 507 aa18.56■□□□□ 0.56
SMPDL3A-202ENST00000487215 FAM169AQ9Y6X4 670 aa18.56■□□□□ 0.56
SMPDL3A-202ENST00000487215 NSG1A0A0A6YYJ2 146 aa18.55■□□□□ 0.56
SMPDL3A-202ENST00000487215 TRAV17A0A0B4J275 112 aa18.55■□□□□ 0.56
SMPDL3A-202ENST00000487215 TARM1B6A8C7 271 aa18.55■□□□□ 0.56
SMPDL3A-202ENST00000487215 PSMD3O43242 534 aa18.55■□□□□ 0.56
SMPDL3A-202ENST00000487215 NRP2O60462 931 aa18.55■□□□□ 0.56
SMPDL3A-202ENST00000487215 FKBP9O95302 570 aa18.55■□□□□ 0.56
SMPDL3A-202ENST00000487215 PRR35P0CG20 571 aa18.55■□□□□ 0.56
SMPDL3A-202ENST00000487215 COX6A1P12074 109 aa18.55■□□□□ 0.56
SMPDL3A-202ENST00000487215 PSMB5P28074 263 aa18.55■□□□□ 0.56
SMPDL3A-202ENST00000487215 CETN2P41208 172 aa18.55■□□□□ 0.56
SMPDL3A-202ENST00000487215 SEMA3AQ14563 771 aa18.55■□□□□ 0.56
SMPDL3A-202ENST00000487215 PRMT9Q6P2P2 845 aa18.55■□□□□ 0.56
SMPDL3A-202ENST00000487215 GFRALQ6UXV0 394 aa18.55■□□□□ 0.56
SMPDL3A-202ENST00000487215 ZNF534Q76KX8 674 aa18.55■□□□□ 0.56
SMPDL3A-202ENST00000487215 CCDC120Q96HB5 630 aa18.55■□□□□ 0.56
SMPDL3A-202ENST00000487215 CARD6Q9BX69 1037 aa18.55■□□□□ 0.56
SMPDL3A-202ENST00000487215 TSSK1BQ9BXA7 367 aa18.55■□□□□ 0.56
SMPDL3A-202ENST00000487215 RAB11FIP5Q9BXF6 653 aa18.55■□□□□ 0.56
SMPDL3A-202ENST00000487215 STOX2Q9P2F5 926 aaPredicted RBP18.55■□□□□ 0.56
SMPDL3A-202ENST00000487215 PDZD2O15018 2839 aa18.55■□□□□ 0.56
SMPDL3A-202ENST00000487215 CSMD2Q7Z408 3487 aa18.55■□□□□ 0.56
SMPDL3A-202ENST00000487215 LOC105369274A0A096LPK9 316 aa18.54■□□□□ 0.56
SMPDL3A-202ENST00000487215 TRGV8A0A0C4DH27 118 aa18.54■□□□□ 0.56
SMPDL3A-202ENST00000487215 LOC102723532A0A0G2JNH3 316 aa18.54■□□□□ 0.56
SMPDL3A-202ENST00000487215 A0A0J9YVX5 310 aa18.54■□□□□ 0.56
SMPDL3A-202ENST00000487215 SLCO2B1O94956 709 aa18.54■□□□□ 0.56
SMPDL3A-202ENST00000487215 APOA4P06727 396 aa18.54■□□□□ 0.56
SMPDL3A-202ENST00000487215 FDXRP22570 491 aa18.54■□□□□ 0.56
SMPDL3A-202ENST00000487215 SPA17Q15506 151 aa18.54■□□□□ 0.56
SMPDL3A-202ENST00000487215 ZXDCQ2QGD7 858 aaPredicted RBP18.54■□□□□ 0.56
SMPDL3A-202ENST00000487215 VWA2Q5GFL6 755 aa18.54■□□□□ 0.56
SMPDL3A-202ENST00000487215 NDUFAF7Q7L592 441 aa18.54■□□□□ 0.56
SMPDL3A-202ENST00000487215 GDF7Q7Z4P5 450 aa18.54■□□□□ 0.56
SMPDL3A-202ENST00000487215 LINC00523Q86TU6 105 aa18.54■□□□□ 0.56
SMPDL3A-202ENST00000487215 LAPTM4BQ86VI4 370 aa18.54■□□□□ 0.56
SMPDL3A-202ENST00000487215 OR4N4Q8N0Y3 316 aa18.54■□□□□ 0.56
SMPDL3A-202ENST00000487215 KRT222Q8N1A0 295 aa18.54■□□□□ 0.56
SMPDL3A-202ENST00000487215 SIRT6Q8N6T7 355 aa18.54■□□□□ 0.56
SMPDL3A-202ENST00000487215 TC2NQ8N9U0 490 aa18.54■□□□□ 0.56
SMPDL3A-202ENST00000487215 HAS2Q92819 552 aa18.54■□□□□ 0.56
SMPDL3A-202ENST00000487215 C10orf90Q96M02 699 aa18.54■□□□□ 0.56
SMPDL3A-202ENST00000487215 MIPEPQ99797 713 aa18.54■□□□□ 0.56
SMPDL3A-202ENST00000487215 SUCOQ9UBS9 1254 aaKnown RBP18.54■□□□□ 0.56
SMPDL3A-202ENST00000487215 ZC3H7BQ9UGR2 993 aaKnown RBP18.54■□□□□ 0.56
SMPDL3A-202ENST00000487215 KLK4Q9Y5K2 254 aa18.54■□□□□ 0.56
SMPDL3A-202ENST00000487215 SVILO95425 2214 aa18.54■□□□□ 0.56
SMPDL3A-202ENST00000487215 IGLV3-12A0A075B6K2 115 aa18.53■□□□□ 0.56
SMPDL3A-202ENST00000487215 RCCD1A6NED2 376 aa18.53■□□□□ 0.56
SMPDL3A-202ENST00000487215 F10P00742 488 aa18.53■□□□□ 0.56
SMPDL3A-202ENST00000487215 EIF2S1P05198 315 aaKnown RBP18.53■□□□□ 0.56
SMPDL3A-202ENST00000487215 SERPINA7P05543 415 aa18.53■□□□□ 0.56
SMPDL3A-202ENST00000487215 FBLP22087 321 aaKnown RBP18.53■□□□□ 0.56
SMPDL3A-202ENST00000487215 AOAHP28039 575 aa18.53■□□□□ 0.56
SMPDL3A-202ENST00000487215 PTGER4P35408 488 aa18.53■□□□□ 0.56
SMPDL3A-202ENST00000487215 ACVR1Q04771 509 aa18.53■□□□□ 0.56
SMPDL3A-202ENST00000487215 EEF1A2Q05639 463 aaKnown RBP18.53■□□□□ 0.56
SMPDL3A-202ENST00000487215 CDH17Q12864 832 aa18.53■□□□□ 0.56
SMPDL3A-202ENST00000487215 TSTD2Q5T7W7 516 aa18.53■□□□□ 0.56
SMPDL3A-202ENST00000487215 CNSTQ6PJW8 725 aa18.53■□□□□ 0.56
SMPDL3A-202ENST00000487215 BNC2Q6ZN30 1099 aaPredicted RBP18.53■□□□□ 0.56
SMPDL3A-202ENST00000487215 RNF44Q7L0R7 432 aa18.53■□□□□ 0.56
SMPDL3A-202ENST00000487215 CNTRLQ7Z7A1 2325 aa18.53■□□□□ 0.56
SMPDL3A-202ENST00000487215 MRGPRGQ86SM5 289 aa18.53■□□□□ 0.56
SMPDL3A-202ENST00000487215 CCDC170Q8IYT3 715 aa18.53■□□□□ 0.56
SMPDL3A-202ENST00000487215 DNAAF3Q8N9W5 541 aa18.53■□□□□ 0.56
SMPDL3A-202ENST00000487215 OR2L3Q8NG85 312 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms