RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 TUBB4BP68371 445 aa4.21□□□□□ -1.74
SMC4-218ENST00000486711 YWHAHQ04917 246 aaPredicted RBP4.21□□□□□ -1.74
SMC4-218ENST00000486711 KLC1Q07866 573 aa4.21□□□□□ -1.74
SMC4-218ENST00000486711 ILF2Q12905 390 aaKnown RBP4.21□□□□□ -1.74
SMC4-218ENST00000486711 E2F5Q15329 346 aa4.21□□□□□ -1.74
SMC4-218ENST00000486711 PHKG1Q16816 387 aa4.21□□□□□ -1.74
SMC4-218ENST00000486711 CDO1Q16878 200 aa4.21□□□□□ -1.74
SMC4-218ENST00000486711 UGT3A2Q3SY77 523 aa4.21□□□□□ -1.74
SMC4-218ENST00000486711 PHLDA2Q53GA4 152 aa4.21□□□□□ -1.74
SMC4-218ENST00000486711 CYP4A22Q5TCH4 519 aa4.21□□□□□ -1.74
SMC4-218ENST00000486711 STPG1Q5TH74 334 aa4.21□□□□□ -1.74
SMC4-218ENST00000486711 C9orf139Q6ZV77 190 aa4.21□□□□□ -1.74
SMC4-218ENST00000486711 ZNF771Q7L3S4 317 aaPredicted RBP4.21□□□□□ -1.74
SMC4-218ENST00000486711 HOOK3Q86VS8 718 aa4.21□□□□□ -1.74
SMC4-218ENST00000486711 AMIGO1Q86WK6 493 aa4.21□□□□□ -1.74
SMC4-218ENST00000486711 NUP93Q8N1F7 819 aa4.21□□□□□ -1.74
SMC4-218ENST00000486711 ANKRD13CQ8N6S4 541 aa4.21□□□□□ -1.74
SMC4-218ENST00000486711 KBTBD3Q8NAB2 608 aa4.21□□□□□ -1.74
SMC4-218ENST00000486711 ATAD1Q8NBU5 361 aa4.21□□□□□ -1.74
SMC4-218ENST00000486711 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.21□□□□□ -1.74
SMC4-218ENST00000486711 RAD54LQ92698 747 aa4.21□□□□□ -1.74
SMC4-218ENST00000486711 DNASE1L2Q92874 299 aa4.21□□□□□ -1.74
SMC4-218ENST00000486711 SLC47A1Q96FL8 570 aa4.21□□□□□ -1.74
SMC4-218ENST00000486711 ZNF354BQ96LW1 612 aa4.21□□□□□ -1.74
SMC4-218ENST00000486711 PSD2Q9BQI7 771 aa4.21□□□□□ -1.74
SMC4-218ENST00000486711 RHNO1Q9BSD3 238 aa4.21□□□□□ -1.74
SMC4-218ENST00000486711 DESI2Q9BSY9 194 aa4.21□□□□□ -1.74
SMC4-218ENST00000486711 DNAI2Q9GZS0 605 aa4.21□□□□□ -1.74
SMC4-218ENST00000486711 C2orf40Q9H1Z8 148 aa4.21□□□□□ -1.74
SMC4-218ENST00000486711 PELI2Q9HAT8 420 aa4.21□□□□□ -1.74
SMC4-218ENST00000486711 GSN-AS1Q9NRJ2 163 aa4.21□□□□□ -1.74
SMC4-218ENST00000486711 ZNF701Q9NV72 531 aaPredicted RBP4.21□□□□□ -1.74
SMC4-218ENST00000486711 WDR83OSQ9Y284 106 aa4.21□□□□□ -1.74
SMC4-218ENST00000486711 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.2□□□□□ -1.74
SMC4-218ENST00000486711 TRAV24A0A0B4J272 114 aa4.2□□□□□ -1.74
SMC4-218ENST00000486711 A0A0U1RQK1 487 aa4.2□□□□□ -1.74
SMC4-218ENST00000486711 ZNF320A2RRD8 509 aa4.2□□□□□ -1.74
SMC4-218ENST00000486711 OOEPA6NGQ2 149 aa4.2□□□□□ -1.74
SMC4-218ENST00000486711 DUXAA6NLW8 204 aa4.2□□□□□ -1.74
SMC4-218ENST00000486711 ARPC2O15144 300 aa4.2□□□□□ -1.74
SMC4-218ENST00000486711 XPNPEP2O43895 674 aa4.2□□□□□ -1.74
SMC4-218ENST00000486711 SNX3O60493 162 aa4.2□□□□□ -1.74
SMC4-218ENST00000486711 GSRP00390 522 aa4.2□□□□□ -1.74
SMC4-218ENST00000486711 CRYAAP02489 173 aa4.2□□□□□ -1.74
SMC4-218ENST00000486711 RLN1P04808 185 aa4.2□□□□□ -1.74
SMC4-218ENST00000486711 EPORP19235 508 aa4.2□□□□□ -1.74
SMC4-218ENST00000486711 CDH3P22223 829 aa4.2□□□□□ -1.74
SMC4-218ENST00000486711 MTCP1P56278 107 aa4.2□□□□□ -1.74
SMC4-218ENST00000486711 LGALS3BPQ08380 585 aa4.2□□□□□ -1.74
SMC4-218ENST00000486711 ZNF415Q09FC8 603 aa4.2□□□□□ -1.74
SMC4-218ENST00000486711 ITPRIPL2Q3MIP1 535 aa4.2□□□□□ -1.74
SMC4-218ENST00000486711 ZRANB3Q5FWF4 1079 aa4.2□□□□□ -1.74
SMC4-218ENST00000486711 CEP85LQ5SZL2 805 aa4.2□□□□□ -1.74
SMC4-218ENST00000486711 ADAM5Q6NVV9 412 aa4.2□□□□□ -1.74
SMC4-218ENST00000486711 CASC4Q6P4E1 433 aa4.2□□□□□ -1.74
SMC4-218ENST00000486711 OTOAQ7RTW8 1153 aa4.2□□□□□ -1.74
SMC4-218ENST00000486711 NRARPQ7Z6K4 114 aa4.2□□□□□ -1.74
SMC4-218ENST00000486711 LGI2Q8N0V4 545 aa4.2□□□□□ -1.74
SMC4-218ENST00000486711 RASGEF1AQ8N9B8 481 aa4.2□□□□□ -1.74
SMC4-218ENST00000486711 NHLRC2Q8NBF2 726 aa4.2□□□□□ -1.74
SMC4-218ENST00000486711 NOA1Q8NC60 698 aaKnown RBP4.2□□□□□ -1.74
SMC4-218ENST00000486711 OR11H4Q8NGC9 324 aa4.2□□□□□ -1.74
SMC4-218ENST00000486711 CTCFLQ8NI51 663 aaPredicted RBP4.2□□□□□ -1.74
SMC4-218ENST00000486711 OCC1Q8TAD7 63 aa4.2□□□□□ -1.74
SMC4-218ENST00000486711 PHLDA1Q8WV24 401 aaPredicted RBP4.2□□□□□ -1.74
SMC4-218ENST00000486711 HSD17B8Q92506 261 aa4.2□□□□□ -1.74
SMC4-218ENST00000486711 BSCL2Q96G97 398 aaPredicted RBP4.2□□□□□ -1.74
SMC4-218ENST00000486711 FAM71F1Q96KD3 344 aaPredicted RBP4.2□□□□□ -1.74
SMC4-218ENST00000486711 UHRF2Q96PU4 802 aa4.2□□□□□ -1.74
SMC4-218ENST00000486711 SLC2A11Q9BYW1 496 aa4.2□□□□□ -1.74
SMC4-218ENST00000486711 BICC1Q9H694 974 aaKnown RBP4.2□□□□□ -1.74
SMC4-218ENST00000486711 TRPV4Q9HBA0 871 aa4.2□□□□□ -1.74
SMC4-218ENST00000486711 DNAJC4Q9NNZ3 241 aa4.2□□□□□ -1.74
SMC4-218ENST00000486711 A4GALTQ9NPC4 353 aa4.2□□□□□ -1.74
SMC4-218ENST00000486711 FGF21Q9NSA1 209 aa4.2□□□□□ -1.74
SMC4-218ENST00000486711 VPS18Q9P253 973 aa4.2□□□□□ -1.74
SMC4-218ENST00000486711 CDH7Q9ULB5 785 aa4.2□□□□□ -1.74
SMC4-218ENST00000486711 YDJCA8MPS7 323 aa4.19□□□□□ -1.74
SMC4-218ENST00000486711 DNM1LO00429 736 aa4.19□□□□□ -1.74
SMC4-218ENST00000486711 FGF17O60258 216 aa4.19□□□□□ -1.74
SMC4-218ENST00000486711 C9P02748 559 aa4.19□□□□□ -1.74
SMC4-218ENST00000486711 VDRP11473 427 aa4.19□□□□□ -1.74
SMC4-218ENST00000486711 TCF4P15884 667 aa4.19□□□□□ -1.74
SMC4-218ENST00000486711 ANOS1P23352 680 aa4.19□□□□□ -1.74
SMC4-218ENST00000486711 MFAP3P55082 362 aa4.19□□□□□ -1.74
SMC4-218ENST00000486711 ARL16Q0P5N6 197 aa4.19□□□□□ -1.74
SMC4-218ENST00000486711 TNK1Q13470 666 aa4.19□□□□□ -1.74
SMC4-218ENST00000486711 NFE2L1Q14494 772 aa4.19□□□□□ -1.74
SMC4-218ENST00000486711 SLMAPQ14BN4 828 aa4.19□□□□□ -1.74
SMC4-218ENST00000486711 MEP1BQ16820 701 aa4.19□□□□□ -1.74
SMC4-218ENST00000486711 UGP2Q16851 508 aa4.19□□□□□ -1.74
SMC4-218ENST00000486711 ANKRD20A4Q4UJ75 823 aa4.19□□□□□ -1.74
SMC4-218ENST00000486711 LACTB2Q53H82 288 aaPredicted RBP4.19□□□□□ -1.74
SMC4-218ENST00000486711 ANKRD20A8PQ5CZ79 823 aa4.19□□□□□ -1.74
SMC4-218ENST00000486711 DCAF10Q5QP82 559 aa4.19□□□□□ -1.74
SMC4-218ENST00000486711 ANKRD20A2Q5SQ80 823 aa4.19□□□□□ -1.74
SMC4-218ENST00000486711 ANKRD20A1Q5TYW2 823 aa4.19□□□□□ -1.74
SMC4-218ENST00000486711 ANKRD20A3Q5VUR7 823 aa4.19□□□□□ -1.74
SMC4-218ENST00000486711 TMEM182Q6ZP80 229 aaPredicted RBP4.19□□□□□ -1.74
SMC4-218ENST00000486711 ANO5Q75V66 913 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms