RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 ALG3Q92685 438 aa12.45□□□□□ -0.42
HDAC6-227ENST00000485102 HAS2Q92819 552 aa12.45□□□□□ -0.42
HDAC6-227ENST00000485102 MOCOSQ96EN8 888 aa12.45□□□□□ -0.42
HDAC6-227ENST00000485102 THOC3Q96J01 351 aaKnown RBP12.45□□□□□ -0.42
HDAC6-227ENST00000485102 FAM118BQ9BPY3 351 aa12.45□□□□□ -0.42
HDAC6-227ENST00000485102 TSSK1BQ9BXA7 367 aa12.45□□□□□ -0.42
HDAC6-227ENST00000485102 RAB11FIP5Q9BXF6 653 aa12.45□□□□□ -0.42
HDAC6-227ENST00000485102 OLAHQ9NV23 265 aa12.45□□□□□ -0.42
HDAC6-227ENST00000485102 CTSFQ9UBX1 484 aa12.45□□□□□ -0.42
HDAC6-227ENST00000485102 TFR2Q9UP52 801 aa12.45□□□□□ -0.42
HDAC6-227ENST00000485102 KLHL20Q9Y2M5 609 aa12.45□□□□□ -0.42
HDAC6-227ENST00000485102 KLF2Q9Y5W3 355 aaPredicted RBP12.45□□□□□ -0.42
HDAC6-227ENST00000485102 CCDC168Q8NDH2 2452 aa12.44□□□□□ -0.42
HDAC6-227ENST00000485102 OR51F1A6NGY5 319 aa12.44□□□□□ -0.42
HDAC6-227ENST00000485102 MIF4GDA9UHW6 222 aaKnown RBP12.44□□□□□ -0.42
HDAC6-227ENST00000485102 RASGRF2O14827 1237 aa12.44□□□□□ -0.42
HDAC6-227ENST00000485102 PCDH17O14917 1159 aa12.44□□□□□ -0.42
HDAC6-227ENST00000485102 ALOX12BO75342 701 aa12.44□□□□□ -0.42
HDAC6-227ENST00000485102 JRKO75564 520 aa12.44□□□□□ -0.42
HDAC6-227ENST00000485102 USP1O94782 785 aa12.44□□□□□ -0.42
HDAC6-227ENST00000485102 SUN1O94901 812 aa12.44□□□□□ -0.42
HDAC6-227ENST00000485102 POU3F2P20265 443 aaPredicted RBP12.44□□□□□ -0.42
HDAC6-227ENST00000485102 MCM3P25205 808 aa12.44□□□□□ -0.42
HDAC6-227ENST00000485102 AOAHP28039 575 aa12.44□□□□□ -0.42
HDAC6-227ENST00000485102 SOX11P35716 441 aa12.44□□□□□ -0.42
HDAC6-227ENST00000485102 GRIA3P42263 894 aa12.44□□□□□ -0.42
HDAC6-227ENST00000485102 TDGF1P3P51864 188 aa12.44□□□□□ -0.42
HDAC6-227ENST00000485102 HSPA14Q0VDF9 509 aa12.44□□□□□ -0.42
HDAC6-227ENST00000485102 CDH17Q12864 832 aa12.44□□□□□ -0.42
HDAC6-227ENST00000485102 KLF1Q13351 362 aaPredicted RBP12.44□□□□□ -0.42
HDAC6-227ENST00000485102 SF1Q15637 639 aaKnown RBP12.44□□□□□ -0.42
HDAC6-227ENST00000485102 AFTPHQ6ULP2 937 aa12.44□□□□□ -0.42
HDAC6-227ENST00000485102 NLRP9Q7RTR0 991 aa12.44□□□□□ -0.42
HDAC6-227ENST00000485102 VRK3Q8IV63 474 aa12.44□□□□□ -0.42
HDAC6-227ENST00000485102 UBL4BQ8N7F7 174 aa12.44□□□□□ -0.42
HDAC6-227ENST00000485102 SLC35B2Q8TB61 432 aa12.44□□□□□ -0.42
HDAC6-227ENST00000485102 STT3BQ8TCJ2 826 aa12.44□□□□□ -0.42
HDAC6-227ENST00000485102 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.44□□□□□ -0.42
HDAC6-227ENST00000485102 PSMF1Q92530 271 aa12.44□□□□□ -0.42
HDAC6-227ENST00000485102 HDAC10Q969S8 669 aa12.44□□□□□ -0.42
HDAC6-227ENST00000485102 SELENOSQ9BQE4 189 aa12.44□□□□□ -0.42
HDAC6-227ENST00000485102 SOX17Q9H6I2 414 aaPredicted RBP12.44□□□□□ -0.42
HDAC6-227ENST00000485102 ZNF304Q9HCX3 659 aa12.44□□□□□ -0.42
HDAC6-227ENST00000485102 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.44□□□□□ -0.42
HDAC6-227ENST00000485102 MRFAP1Q9Y605 127 aa12.44□□□□□ -0.42
HDAC6-227ENST00000485102 HEATR5BQ9P2D3 2071 aa12.44□□□□□ -0.42
HDAC6-227ENST00000485102 TRAV17A0A0B4J275 112 aa12.43□□□□□ -0.42
HDAC6-227ENST00000485102 HYKKA2RU49 373 aa12.43□□□□□ -0.42
HDAC6-227ENST00000485102 CTSVO60911 334 aa12.43□□□□□ -0.42
HDAC6-227ENST00000485102 GOT2P00505 430 aaKnown RBP12.43□□□□□ -0.42
HDAC6-227ENST00000485102 APOA4P06727 396 aa12.43□□□□□ -0.42
HDAC6-227ENST00000485102 ZGLP1P0C6A0 271 aa12.43□□□□□ -0.42
HDAC6-227ENST00000485102 ACPPP15309 386 aa12.43□□□□□ -0.42
HDAC6-227ENST00000485102 OR1D4P47884 311 aa12.43□□□□□ -0.42
HDAC6-227ENST00000485102 TNFSF10P50591 281 aa12.43□□□□□ -0.42
HDAC6-227ENST00000485102 OCA2Q04671 838 aa12.43□□□□□ -0.42
HDAC6-227ENST00000485102 KLC1Q07866 573 aa12.43□□□□□ -0.42
HDAC6-227ENST00000485102 NAA30Q147X3 362 aaPredicted RBP12.43□□□□□ -0.42
HDAC6-227ENST00000485102 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.43□□□□□ -0.42
HDAC6-227ENST00000485102 WASHC2DQ5SRD0 308 aa12.43□□□□□ -0.42
HDAC6-227ENST00000485102 TSTD2Q5T7W7 516 aa12.43□□□□□ -0.42
HDAC6-227ENST00000485102 AADACL2Q6P093 401 aa12.43□□□□□ -0.42
HDAC6-227ENST00000485102 ZNF534Q76KX8 674 aa12.43□□□□□ -0.42
HDAC6-227ENST00000485102 NDUFAF7Q7L592 441 aa12.43□□□□□ -0.42
HDAC6-227ENST00000485102 KBTBD2Q8IY47 623 aa12.43□□□□□ -0.42
HDAC6-227ENST00000485102 LRRC57Q8N9N7 239 aa12.43□□□□□ -0.42
HDAC6-227ENST00000485102 ACRBPQ8NEB7 543 aa12.43□□□□□ -0.42
HDAC6-227ENST00000485102 CATSPER1Q8NEC5 780 aa12.43□□□□□ -0.42
HDAC6-227ENST00000485102 OR4L1Q8NH43 312 aa12.43□□□□□ -0.42
HDAC6-227ENST00000485102 NR4A3Q92570 626 aa12.43□□□□□ -0.42
HDAC6-227ENST00000485102 RAD51AP1Q96B01 352 aa12.43□□□□□ -0.42
HDAC6-227ENST00000485102 MVB12AQ96EY5 273 aa12.43□□□□□ -0.42
HDAC6-227ENST00000485102 CNDP1Q96KN2 507 aa12.43□□□□□ -0.42
HDAC6-227ENST00000485102 CRB3Q9BUF7 120 aa12.43□□□□□ -0.42
HDAC6-227ENST00000485102 UNKQ9C0B0 810 aaKnown RBP12.43□□□□□ -0.42
HDAC6-227ENST00000485102 COPG2Q9UBF2 871 aa12.43□□□□□ -0.42
HDAC6-227ENST00000485102 ZNF282Q9UDV7 671 aaPredicted RBP12.43□□□□□ -0.42
HDAC6-227ENST00000485102 SLC39A10Q9ULF5 831 aa12.43□□□□□ -0.42
HDAC6-227ENST00000485102 PPP2R2CQ9Y2T4 447 aa12.43□□□□□ -0.42
HDAC6-227ENST00000485102 CSMD2Q7Z408 3487 aa12.42□□□□□ -0.42
HDAC6-227ENST00000485102 PDZD2O15018 2839 aa12.42□□□□□ -0.42
HDAC6-227ENST00000485102 ARHGAP10A1A4S6 786 aa12.42□□□□□ -0.42
HDAC6-227ENST00000485102 DYTNA2CJ06 578 aa12.42□□□□□ -0.42
HDAC6-227ENST00000485102 RCCD1A6NED2 376 aa12.42□□□□□ -0.42
HDAC6-227ENST00000485102 PRSS44E7EML9 344 aa12.42□□□□□ -0.42
HDAC6-227ENST00000485102 MAP2K7O14733 419 aa12.42□□□□□ -0.42
HDAC6-227ENST00000485102 KIF5CO60282 957 aa12.42□□□□□ -0.42
HDAC6-227ENST00000485102 GAS8O95995 478 aa12.42□□□□□ -0.42
HDAC6-227ENST00000485102 TUBB4AP04350 444 aa12.42□□□□□ -0.42
HDAC6-227ENST00000485102 ATXN8OSP0DMR3 200 aa12.42□□□□□ -0.42
HDAC6-227ENST00000485102 ADRA1DP25100 572 aa12.42□□□□□ -0.42
HDAC6-227ENST00000485102 STIP1P31948 543 aaKnown RBP12.42□□□□□ -0.42
HDAC6-227ENST00000485102 GDF10P55107 478 aa12.42□□□□□ -0.42
HDAC6-227ENST00000485102 NAA25Q14CX7 972 aa12.42□□□□□ -0.42
HDAC6-227ENST00000485102 CCDC38Q502W7 563 aa12.42□□□□□ -0.42
HDAC6-227ENST00000485102 TTC23LQ6PF05 361 aa12.42□□□□□ -0.42
HDAC6-227ENST00000485102 LINC00696Q6ZRV3 163 aa12.42□□□□□ -0.42
HDAC6-227ENST00000485102 RIPOR1Q6ZS17 1223 aa12.42□□□□□ -0.42
HDAC6-227ENST00000485102 SHISA6Q6ZSJ9 500 aa12.42□□□□□ -0.42
HDAC6-227ENST00000485102 RNF44Q7L0R7 432 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms