RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 PTGR1Q14914 329 aa16.19■□□□□ 0.18
CTSA-207ENST00000484855 SAMD4BQ5PRF9 694 aaKnown RBP16.19■□□□□ 0.18
CTSA-207ENST00000484855 TMPRSS11BQ86T26 416 aa16.19■□□□□ 0.18
CTSA-207ENST00000484855 PHC3Q8NDX5 983 aa16.19■□□□□ 0.18
CTSA-207ENST00000484855 WDR20Q8TBZ3 569 aa16.19■□□□□ 0.18
CTSA-207ENST00000484855 CMTM7Q96FZ5 175 aa16.19■□□□□ 0.18
CTSA-207ENST00000484855 LRCH3Q96II8 777 aa16.19■□□□□ 0.18
CTSA-207ENST00000484855 UHRF1Q96T88 793 aaPredicted RBP16.19■□□□□ 0.18
CTSA-207ENST00000484855 ZBTB18Q99592 522 aa16.19■□□□□ 0.18
CTSA-207ENST00000484855 GPATCH1Q9BRR8 931 aaKnown RBP16.19■□□□□ 0.18
CTSA-207ENST00000484855 SGPP1Q9BX95 441 aa16.19■□□□□ 0.18
CTSA-207ENST00000484855 RMI1Q9H9A7 625 aa16.19■□□□□ 0.18
CTSA-207ENST00000484855 CCDC177Q9NQR7 707 aaPredicted RBP16.19■□□□□ 0.18
CTSA-207ENST00000484855 ANGPTL2Q9UKU9 493 aa16.19■□□□□ 0.18
CTSA-207ENST00000484855 NDRG2Q9UN36 371 aaKnown RBP16.19■□□□□ 0.18
CTSA-207ENST00000484855 SLC17A4Q9Y2C5 497 aa16.19■□□□□ 0.18
CTSA-207ENST00000484855 TDRKHQ9Y2W6 561 aaKnown RBP16.19■□□□□ 0.18
CTSA-207ENST00000484855 FXYD1O00168 92 aa16.19■□□□□ 0.18
CTSA-207ENST00000484855 ANP32DO95626 131 aa16.19■□□□□ 0.18
CTSA-207ENST00000484855 CEACAM5P06731 702 aa16.19■□□□□ 0.18
CTSA-207ENST00000484855 TAP2Q03519 686 aa16.19■□□□□ 0.18
CTSA-207ENST00000484855 DMPKQ09013 629 aa16.19■□□□□ 0.18
CTSA-207ENST00000484855 CSTF3Q12996 717 aaKnown RBP16.19■□□□□ 0.18
CTSA-207ENST00000484855 GALNT13Q8IUC8 556 aa16.19■□□□□ 0.18
CTSA-207ENST00000484855 LMNTD1Q8N9Z9 388 aa16.19■□□□□ 0.18
CTSA-207ENST00000484855 FAM156AQ8NDB6 213 aa16.19■□□□□ 0.18
CTSA-207ENST00000484855 OR5K2Q8NHB8 316 aa16.19■□□□□ 0.18
CTSA-207ENST00000484855 PYDC1Q8WXC3 89 aa16.19■□□□□ 0.18
CTSA-207ENST00000484855 ASB12Q8WXK4 309 aa16.19■□□□□ 0.18
CTSA-207ENST00000484855 NEIL2Q969S2 332 aa16.19■□□□□ 0.18
CTSA-207ENST00000484855 LRRC58Q96CX6 371 aa16.19■□□□□ 0.18
CTSA-207ENST00000484855 TIMM29Q9BSF4 260 aa16.19■□□□□ 0.18
CTSA-207ENST00000484855 TACO1Q9BSH4 297 aaKnown RBP16.19■□□□□ 0.18
CTSA-207ENST00000484855 OSGEPL1Q9H4B0 414 aa16.19■□□□□ 0.18
CTSA-207ENST00000484855 S100A14Q9HCY8 104 aa16.19■□□□□ 0.18
CTSA-207ENST00000484855 SUCOQ9UBS9 1254 aaKnown RBP16.19■□□□□ 0.18
CTSA-207ENST00000484855 BCAP29Q9UHQ4 241 aa16.19■□□□□ 0.18
CTSA-207ENST00000484855 MOSPD1Q9UJG1 213 aa16.19■□□□□ 0.18
CTSA-207ENST00000484855 ACSL5Q9ULC5 683 aa16.19■□□□□ 0.18
CTSA-207ENST00000484855 PLAGL1Q9UM63 463 aa16.19■□□□□ 0.18
CTSA-207ENST00000484855 KANSL1LA0AUZ9 987 aa16.18■□□□□ 0.18
CTSA-207ENST00000484855 H0YIV9 168 aa16.18■□□□□ 0.18
CTSA-207ENST00000484855 FUCA1P04066 466 aa16.18■□□□□ 0.18
CTSA-207ENST00000484855 VARSP26640 1264 aaKnown RBP16.18■□□□□ 0.18
CTSA-207ENST00000484855 RPL10P27635 214 aaKnown RBP16.18■□□□□ 0.18
CTSA-207ENST00000484855 CASP2P42575 452 aa16.18■□□□□ 0.18
CTSA-207ENST00000484855 PTDSS1P48651 473 aaKnown RBP16.18■□□□□ 0.18
CTSA-207ENST00000484855 CLCNKAP51800 687 aa16.18■□□□□ 0.18
CTSA-207ENST00000484855 FOXM1Q08050 763 aa16.18■□□□□ 0.18
CTSA-207ENST00000484855 CAPRIN1Q14444 709 aaKnown RBP16.18■□□□□ 0.18
CTSA-207ENST00000484855 KIAA0040Q15053 153 aa16.18■□□□□ 0.18
CTSA-207ENST00000484855 USP39Q53GS9 565 aaKnown RBP16.18■□□□□ 0.18
CTSA-207ENST00000484855 PAGE3Q5JUK9 113 aa16.18■□□□□ 0.18
CTSA-207ENST00000484855 SUSD1Q6UWL2 747 aa16.18■□□□□ 0.18
CTSA-207ENST00000484855 LRRC56Q8IYG6 542 aaPredicted RBP16.18■□□□□ 0.18
CTSA-207ENST00000484855 RNF175Q8N4F7 328 aa16.18■□□□□ 0.18
CTSA-207ENST00000484855 MINDY1Q8N5J2 469 aa16.18■□□□□ 0.18
CTSA-207ENST00000484855 DPY30Q9C005 99 aa16.18■□□□□ 0.18
CTSA-207ENST00000484855 SGK2Q9HBY8 427 aa16.18■□□□□ 0.18
CTSA-207ENST00000484855 CFAP20Q9Y6A4 193 aaKnown RBP16.18■□□□□ 0.18
CTSA-207ENST00000484855 PRORSD1PA6NEY8 169 aa16.17■□□□□ 0.18
CTSA-207ENST00000484855 NPIPB8E9PQR5 432 aa16.17■□□□□ 0.18
CTSA-207ENST00000484855 SRFP11831 508 aa16.17■□□□□ 0.18
CTSA-207ENST00000484855 BCKDHAP12694 445 aa16.17■□□□□ 0.18
CTSA-207ENST00000484855 ANPEPP15144 967 aa16.17■□□□□ 0.18
CTSA-207ENST00000484855 ACSL1P33121 698 aa16.17■□□□□ 0.18
CTSA-207ENST00000484855 TPMTP51580 245 aa16.17■□□□□ 0.18
CTSA-207ENST00000484855 MS4A2Q01362 244 aa16.17■□□□□ 0.18
CTSA-207ENST00000484855 DDX39BQ13838 428 aaKnown RBP16.17■□□□□ 0.18
CTSA-207ENST00000484855 TLR1Q15399 786 aa16.17■□□□□ 0.18
CTSA-207ENST00000484855 SLCO4C1Q6ZQN7 724 aa16.17■□□□□ 0.18
CTSA-207ENST00000484855 ASB9Q96DX5 294 aa16.17■□□□□ 0.18
CTSA-207ENST00000484855 IL17FQ96PD4 163 aa16.17■□□□□ 0.18
CTSA-207ENST00000484855 EBF2Q9HAK2 575 aa16.17■□□□□ 0.18
CTSA-207ENST00000484855 SUFUQ9UMX1 484 aa16.17■□□□□ 0.18
CTSA-207ENST00000484855 TMED5Q9Y3A6 229 aa16.17■□□□□ 0.18
CTSA-207ENST00000484855 PCDHGA11Q9Y5H2 935 aa16.17■□□□□ 0.18
CTSA-207ENST00000484855 MAP3K7O43318 606 aa16.17■□□□□ 0.18
CTSA-207ENST00000484855 NPPBP16860 134 aa16.17■□□□□ 0.18
CTSA-207ENST00000484855 GABRG2P18507 467 aa16.17■□□□□ 0.18
CTSA-207ENST00000484855 MAPK1P28482 360 aa16.17■□□□□ 0.18
CTSA-207ENST00000484855 E2F2Q14209 437 aa16.17■□□□□ 0.18
CTSA-207ENST00000484855 THEMIS2Q5TEJ8 643 aa16.17■□□□□ 0.18
CTSA-207ENST00000484855 TRIM69Q86WT6 500 aa16.17■□□□□ 0.18
CTSA-207ENST00000484855 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.17■□□□□ 0.18
CTSA-207ENST00000484855 BHLHE22Q8NFJ8 381 aaPredicted RBP16.17■□□□□ 0.18
CTSA-207ENST00000484855 HMGB4Q8WW32 186 aa16.17■□□□□ 0.18
CTSA-207ENST00000484855 APIPQ96GX9 242 aa16.17■□□□□ 0.18
CTSA-207ENST00000484855 MTERF1Q99551 399 aaKnown RBP16.17■□□□□ 0.18
CTSA-207ENST00000484855 BTBD1Q9H0C5 482 aa16.17■□□□□ 0.18
CTSA-207ENST00000484855 TRIT1Q9H3H1 467 aaKnown RBP16.17■□□□□ 0.18
CTSA-207ENST00000484855 PRM3Q9NNZ6 103 aa16.17■□□□□ 0.18
CTSA-207ENST00000484855 SLC2A4RGQ9NR83 387 aa16.17■□□□□ 0.18
CTSA-207ENST00000484855 ABCD2Q9UBJ2 740 aa16.17■□□□□ 0.18
CTSA-207ENST00000484855 CD300AQ9UGN4 299 aa16.17■□□□□ 0.18
CTSA-207ENST00000484855 SH2B3Q9UQQ2 575 aa16.17■□□□□ 0.18
CTSA-207ENST00000484855 KCNK6Q9Y257 313 aa16.17■□□□□ 0.18
CTSA-207ENST00000484855 GPSM3Q9Y4H4 160 aa16.17■□□□□ 0.18
CTSA-207ENST00000484855 CROCCQ5TZA2 2017 aa16.17■□□□□ 0.18
CTSA-207ENST00000484855 LRRC72A6NJI9 287 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms