RNA–Protein interactions for RNA: ENST00000482879.5

SDC1-206, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-206ENST00000482879 TRIM13O60858 407 aa11.82□□□□□ -0.52
SDC1-206ENST00000482879 RPLP0P05388 317 aaKnown RBP11.82□□□□□ -0.52
SDC1-206ENST00000482879 GP1BAP07359 652 aa11.82□□□□□ -0.52
SDC1-206ENST00000482879 DHRS4L1P0CG22 281 aa11.82□□□□□ -0.52
SDC1-206ENST00000482879 NEFHP12036 1026 aa11.82□□□□□ -0.52
SDC1-206ENST00000482879 IMPDH1P20839 514 aa11.82□□□□□ -0.52
SDC1-206ENST00000482879 PEBP1P30086 187 aaKnown RBP11.82□□□□□ -0.52
SDC1-206ENST00000482879 CAPZBP47756 277 aa11.82□□□□□ -0.52
SDC1-206ENST00000482879 SLC6A12P48065 614 aa11.82□□□□□ -0.52
SDC1-206ENST00000482879 ACADVLP49748 655 aa11.82□□□□□ -0.52
SDC1-206ENST00000482879 DNAJB13P59910 316 aa11.82□□□□□ -0.52
SDC1-206ENST00000482879 HERVK_113P63132 956 aa11.82□□□□□ -0.52
SDC1-206ENST00000482879 ASPHQ12797 758 aa11.82□□□□□ -0.52
SDC1-206ENST00000482879 KIR2DS3Q14952 304 aa11.82□□□□□ -0.52
SDC1-206ENST00000482879 SF1Q15637 639 aaKnown RBP11.82□□□□□ -0.52
SDC1-206ENST00000482879 TRIP6Q15654 476 aaKnown RBP11.82□□□□□ -0.52
SDC1-206ENST00000482879 CCDC157Q569K6 752 aa11.82□□□□□ -0.52
SDC1-206ENST00000482879 PRAMEF13Q5VWM6 474 aa11.82□□□□□ -0.52
SDC1-206ENST00000482879 LIPMQ5VYY2 423 aa11.82□□□□□ -0.52
SDC1-206ENST00000482879 IRGCQ6NXR0 463 aa11.82□□□□□ -0.52
SDC1-206ENST00000482879 LRRC70Q7Z2Q7 622 aa11.82□□□□□ -0.52
SDC1-206ENST00000482879 KLHDC8AQ8IYD2 350 aa11.82□□□□□ -0.52
SDC1-206ENST00000482879 TEX9Q8N6V9 391 aa11.82□□□□□ -0.52
SDC1-206ENST00000482879 CCNYL1Q8N7R7 359 aa11.82□□□□□ -0.52
SDC1-206ENST00000482879 SNX31Q8N9S9 440 aa11.82□□□□□ -0.52
SDC1-206ENST00000482879 PPP4R1Q8TF05 950 aa11.82□□□□□ -0.52
SDC1-206ENST00000482879 SREK1Q8WXA9 508 aaKnown RBP11.82□□□□□ -0.52
SDC1-206ENST00000482879 SLC22A18Q96BI1 424 aa11.82□□□□□ -0.52
SDC1-206ENST00000482879 MIPEPQ99797 713 aa11.82□□□□□ -0.52
SDC1-206ENST00000482879 ACAT2Q9BWD1 397 aa11.82□□□□□ -0.52
SDC1-206ENST00000482879 SGPP1Q9BX95 441 aa11.82□□□□□ -0.52
SDC1-206ENST00000482879 ERVK-6Q9BXR3 956 aa11.82□□□□□ -0.52
SDC1-206ENST00000482879 ZMYND15Q9H091 742 aa11.82□□□□□ -0.52
SDC1-206ENST00000482879 PCBD2Q9H0N5 130 aa11.82□□□□□ -0.52
SDC1-206ENST00000482879 SYNDIG1Q9H7V2 258 aa11.82□□□□□ -0.52
SDC1-206ENST00000482879 ACSS2Q9NR19 701 aa11.82□□□□□ -0.52
SDC1-206ENST00000482879 DNAJC11Q9NVH1 559 aa11.82□□□□□ -0.52
SDC1-206ENST00000482879 OPTCQ9UBM4 332 aa11.82□□□□□ -0.52
SDC1-206ENST00000482879 TAC3Q9UHF0 121 aa11.82□□□□□ -0.52
SDC1-206ENST00000482879 ASB1Q9Y576 335 aa11.82□□□□□ -0.52
SDC1-206ENST00000482879 ANGPTL3Q9Y5C1 460 aa11.82□□□□□ -0.52
SDC1-206ENST00000482879 A0A1W2PQM1 296 aa11.81□□□□□ -0.52
SDC1-206ENST00000482879 K7EPI3 171 aa11.81□□□□□ -0.52
SDC1-206ENST00000482879 SLC30A4O14863 429 aa11.81□□□□□ -0.52
SDC1-206ENST00000482879 TM4SF5O14894 197 aa11.81□□□□□ -0.52
SDC1-206ENST00000482879 CASC3O15234 703 aaKnown RBP11.81□□□□□ -0.52
SDC1-206ENST00000482879 BIRC5O15392 142 aa11.81□□□□□ -0.52
SDC1-206ENST00000482879 CAPN5O15484 640 aaPredicted RBP11.81□□□□□ -0.52
SDC1-206ENST00000482879 SUPT7LO94864 414 aa11.81□□□□□ -0.52
SDC1-206ENST00000482879 CHN1P15882 459 aa11.81□□□□□ -0.52
SDC1-206ENST00000482879 UGT2B7P16662 529 aa11.81□□□□□ -0.52
SDC1-206ENST00000482879 NPPBP16860 134 aa11.81□□□□□ -0.52
SDC1-206ENST00000482879 CSRP1P21291 193 aaKnown RBP11.81□□□□□ -0.52
SDC1-206ENST00000482879 PSMB5P28074 263 aa11.81□□□□□ -0.52
SDC1-206ENST00000482879 PRDX3P30048 256 aaKnown RBP11.81□□□□□ -0.52
SDC1-206ENST00000482879 ATP1A2P50993 1020 aa11.81□□□□□ -0.52
SDC1-206ENST00000482879 NAGLUP54802 743 aa11.81□□□□□ -0.52
SDC1-206ENST00000482879 PPP1CAP62136 330 aa11.81□□□□□ -0.52
SDC1-206ENST00000482879 CFHR1Q03591 330 aa11.81□□□□□ -0.52
SDC1-206ENST00000482879 SQSTM1Q13501 440 aa11.81□□□□□ -0.52
SDC1-206ENST00000482879 GTF2H2Q13888 395 aa11.81□□□□□ -0.52
SDC1-206ENST00000482879 UNC50Q53HI1 259 aa11.81□□□□□ -0.52
SDC1-206ENST00000482879 CFAP157Q5JU67 520 aa11.81□□□□□ -0.52
SDC1-206ENST00000482879 ZNF678Q5SXM1 525 aa11.81□□□□□ -0.52
SDC1-206ENST00000482879 GTF2H2CQ6P1K8 395 aa11.81□□□□□ -0.52
SDC1-206ENST00000482879 METTL2BQ6P1Q9 378 aaKnown RBP11.81□□□□□ -0.52
SDC1-206ENST00000482879 LCTLQ6UWM7 567 aa11.81□□□□□ -0.52
SDC1-206ENST00000482879 PLXDC1Q8IUK5 500 aa11.81□□□□□ -0.52
SDC1-206ENST00000482879 ARFGAP2Q8N6H7 521 aa11.81□□□□□ -0.52
SDC1-206ENST00000482879 OR2A1Q8NGT9 310 aa11.81□□□□□ -0.52
SDC1-206ENST00000482879 PPP1R14CQ8TAE6 165 aa11.81□□□□□ -0.52
SDC1-206ENST00000482879 L3HYPDHQ96EM0 354 aa11.81□□□□□ -0.52
SDC1-206ENST00000482879 MOCOSQ96EN8 888 aa11.81□□□□□ -0.52
SDC1-206ENST00000482879 ZDHHC12Q96GR4 267 aa11.81□□□□□ -0.52
SDC1-206ENST00000482879 TGM7Q96PF1 710 aa11.81□□□□□ -0.52
SDC1-206ENST00000482879 TMEM237Q96Q45 408 aa11.81□□□□□ -0.52
SDC1-206ENST00000482879 OR2A14Q96R47 310 aa11.81□□□□□ -0.52
SDC1-206ENST00000482879 OR4K3Q96R72 315 aa11.81□□□□□ -0.52
SDC1-206ENST00000482879 HAUS8Q9BT25 410 aa11.81□□□□□ -0.52
SDC1-206ENST00000482879 TWSG1Q9GZX9 223 aa11.81□□□□□ -0.52
SDC1-206ENST00000482879 RAB33BQ9H082 229 aa11.81□□□□□ -0.52
SDC1-206ENST00000482879 ABCG4Q9H172 646 aa11.81□□□□□ -0.52
SDC1-206ENST00000482879 INTS9Q9NV88 658 aaKnown RBP11.81□□□□□ -0.52
SDC1-206ENST00000482879 EPHA6Q9UF33 1036 aa11.81□□□□□ -0.52
SDC1-206ENST00000482879 CDV3Q9UKY7 258 aaKnown RBP11.81□□□□□ -0.52
SDC1-206ENST00000482879 ATXN7L1Q9ULK2 861 aaPredicted RBP11.81□□□□□ -0.52
SDC1-206ENST00000482879 DYRK1BQ9Y463 629 aa11.81□□□□□ -0.52
SDC1-206ENST00000482879 E2F3O00716 465 aa11.8□□□□□ -0.52
SDC1-206ENST00000482879 RFPL3O75679 317 aa11.8□□□□□ -0.52
SDC1-206ENST00000482879 CCNDBP1O95273 360 aa11.8□□□□□ -0.52
SDC1-206ENST00000482879 CPNE6O95741 557 aa11.8□□□□□ -0.52
SDC1-206ENST00000482879 RPS17P08708 135 aaKnown RBP11.8□□□□□ -0.52
SDC1-206ENST00000482879 EPB42P16452 691 aa11.8□□□□□ -0.52
SDC1-206ENST00000482879 CMPK1P30085 196 aa11.8□□□□□ -0.52
SDC1-206ENST00000482879 CSF2RBP32927 897 aa11.8□□□□□ -0.52
SDC1-206ENST00000482879 PIK3CGP48736 1102 aa11.8□□□□□ -0.52
SDC1-206ENST00000482879 CDH13P55290 713 aa11.8□□□□□ -0.52
SDC1-206ENST00000482879 GFERP55789 205 aa11.8□□□□□ -0.52
SDC1-206ENST00000482879 E2F1Q01094 437 aa11.8□□□□□ -0.52
SDC1-206ENST00000482879 PRDX1Q06830 199 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms